RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 RNASEH1O60930 286 aaKnown RBP12.4□□□□□ -0.42
RFC5-201ENST00000392542 ASGR1P07306 291 aa12.4□□□□□ -0.42
RFC5-201ENST00000392542 LTA4HP09960 611 aaKnown RBP12.4□□□□□ -0.42
RFC5-201ENST00000392542 PEX19P40855 299 aa12.4□□□□□ -0.42
RFC5-201ENST00000392542 CD86P42081 329 aa12.4□□□□□ -0.42
RFC5-201ENST00000392542 THOP1P52888 689 aa12.4□□□□□ -0.42
RFC5-201ENST00000392542 RPL26P61254 145 aaKnown RBP12.4□□□□□ -0.42
RFC5-201ENST00000392542 RFTN1Q14699 578 aaPredicted RBP12.4□□□□□ -0.42
RFC5-201ENST00000392542 SDHAF4Q5VUM1 108 aa12.4□□□□□ -0.42
RFC5-201ENST00000392542 TFAP2DQ7Z6R9 452 aa12.4□□□□□ -0.42
RFC5-201ENST00000392542 SDCCAG8Q86SQ7 713 aaPredicted RBP12.4□□□□□ -0.42
RFC5-201ENST00000392542 DCP1BQ8IZD4 617 aaKnown RBP12.4□□□□□ -0.42
RFC5-201ENST00000392542 PHC3Q8NDX5 983 aa12.4□□□□□ -0.42
RFC5-201ENST00000392542 CEP70Q8NHQ1 597 aa12.4□□□□□ -0.42
RFC5-201ENST00000392542 FAR2Q96K12 515 aa12.4□□□□□ -0.42
RFC5-201ENST00000392542 TRAPPC9Q96Q05 1148 aa12.4□□□□□ -0.42
RFC5-201ENST00000392542 TUBGCP5Q96RT8 1024 aa12.4□□□□□ -0.42
RFC5-201ENST00000392542 ZYG11BQ9C0D3 744 aa12.4□□□□□ -0.42
RFC5-201ENST00000392542 EFCAB1Q9HAE3 211 aa12.4□□□□□ -0.42
RFC5-201ENST00000392542 A8MT66 165 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 SEPT4O43236 478 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 B4GALT3O60512 393 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 MMP2P08253 660 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 ZCCHC18P0CG32 403 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 ENO3P13929 434 aaPredicted RBP12.39□□□□□ -0.43
RFC5-201ENST00000392542 MAXP61244 160 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 SULT2A1Q06520 285 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 ITKQ08881 620 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 SLC10A7Q0GE19 358 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 SLC14A2Q15849 920 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 OGFRL1Q5TC84 451 aaPredicted RBP12.39□□□□□ -0.43
RFC5-201ENST00000392542 MARC1Q5VT66 337 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 GALNT7Q86SF2 657 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 PQLC1Q8N2U9 271 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 OR13J1Q8NGT2 312 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 C8orf48Q96LL4 319 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 KLHL5Q96PQ7 755 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 DDX50Q9BQ39 737 aaKnown RBP12.39□□□□□ -0.43
RFC5-201ENST00000392542 WDR41Q9HAD4 459 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 SP110Q9HB58 689 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 RRAGCQ9HB90 399 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 SPATS2LQ9NUQ6 558 aaKnown RBP12.39□□□□□ -0.43
RFC5-201ENST00000392542 C6orf203Q9P0P8 240 aaPredicted RBP12.39□□□□□ -0.43
RFC5-201ENST00000392542 BCAP29Q9UHQ4 241 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 CFLARO15519 480 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 SMIM24O75264 130 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 CNTN5O94779 1100 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 RBP1P09455 135 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 HAPLN1P10915 354 aaPredicted RBP12.39□□□□□ -0.43
RFC5-201ENST00000392542 HNRNPLP14866 589 aaKnown RBP eCLIP12.39□□□□□ -0.43
RFC5-201ENST00000392542 XRCC1P18887 633 aaPredicted RBP12.39□□□□□ -0.43
RFC5-201ENST00000392542 KCNA5P22460 613 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 GPR15P49685 360 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 DSC2Q02487 901 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 MED21Q13503 144 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 ART3Q13508 389 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 CEACAM7Q14002 265 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 FLOT2Q14254 428 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 DDR2Q16832 855 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 MS4A13Q5J8X5 152 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 FAM26DQ5JW98 314 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 HECTD2Q5U5R9 776 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 FOXB2Q5VYV0 432 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 KLC3Q6P597 504 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 RNF135Q8IUD6 432 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 PELI3Q8N2H9 469 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 ARHGAP18Q8N392 663 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 AFAP1L2Q8N4X5 818 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 PABPC5Q96DU9 382 aaKnown RBP12.39□□□□□ -0.43
RFC5-201ENST00000392542 FUBP3Q96I24 572 aaKnown RBP eCLIP12.39□□□□□ -0.43
RFC5-201ENST00000392542 TSC22D3Q99576 134 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 FBXO44Q9H4M3 255 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 EML4Q9HC35 981 aaKnown RBP12.39□□□□□ -0.43
RFC5-201ENST00000392542 CYP4F12Q9HCS2 524 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 FRMPD3Q5JV73 1810 aa12.39□□□□□ -0.43
RFC5-201ENST00000392542 TCAF2A6NFQ2 919 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 SLC7A4O43246 635 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 IPO13O94829 963 aaKnown RBP12.38□□□□□ -0.43
RFC5-201ENST00000392542 OAZ2O95190 189 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 CCDC166P0CW27 439 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 HSPA1AP0DMV8 641 aaKnown RBP12.38□□□□□ -0.43
RFC5-201ENST00000392542 HSPA1BP0DMV9 641 aaKnown RBP12.38□□□□□ -0.43
RFC5-201ENST00000392542 DPP6P42658 865 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 ALDH1A3P47895 512 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 CACNB2Q08289 660 aaPredicted RBP12.38□□□□□ -0.43
RFC5-201ENST00000392542 KCNA10Q16322 511 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 PSMD5Q16401 504 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 NFE2Q16621 373 aaPredicted RBP12.38□□□□□ -0.43
RFC5-201ENST00000392542 TRIM71Q2Q1W2 868 aaKnown RBP12.38□□□□□ -0.43
RFC5-201ENST00000392542 ALFQ53S48 1182 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 ZFP1Q6P2D0 407 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 ZNF280BQ86YH2 543 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 CILP2Q8IUL8 1156 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 TEX26Q8N6G2 289 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 ATP6V0D2Q8N8Y2 350 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 MFSD1Q9H3U5 465 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 GMIPQ9P107 970 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 IGLV3-10A0A075B6K4 115 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 MROH6A6NGR9 719 aa12.38□□□□□ -0.43
RFC5-201ENST00000392542 MYCNP04198 464 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms