RNA–Protein interactions for RNA: ENST00000392249.6

STRADB-202, Transcript of STE20-related kinase adaptor beta, humanhuman

TSL 1 (best) BASIC

Gene STRADB, Length 2,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRADB-202ENST00000392249 FEM1CQ96JP0 617 aa18.66■□□□□ 0.58
STRADB-202ENST00000392249 CCDC106Q9BWC9 280 aa18.66■□□□□ 0.58
STRADB-202ENST00000392249 STN1Q9H668 368 aaKnown RBP18.66■□□□□ 0.58
STRADB-202ENST00000392249 SMPD4Q9NXE4 827 aa18.66■□□□□ 0.58
STRADB-202ENST00000392249 TAS2R1Q9NYW7 299 aa18.66■□□□□ 0.58
STRADB-202ENST00000392249 AGO1Q9UL18 857 aaKnown RBP18.66■□□□□ 0.58
STRADB-202ENST00000392249 APOBEC2Q9Y235 224 aaKnown RBP18.66■□□□□ 0.58
STRADB-202ENST00000392249 ARL5AQ9Y689 179 aa18.66■□□□□ 0.58
STRADB-202ENST00000392249 ANAPC1Q9H1A4 1944 aa18.66■□□□□ 0.58
STRADB-202ENST00000392249 PRR5-ARHGAP8B1AHC4 643 aa18.66■□□□□ 0.58
STRADB-202ENST00000392249 TMEM114B3SHH9 223 aa18.66■□□□□ 0.58
STRADB-202ENST00000392249 ZNF195O14628 629 aa18.66■□□□□ 0.58
STRADB-202ENST00000392249 PRRG1O14668 218 aa18.66■□□□□ 0.58
STRADB-202ENST00000392249 SCAMP3O14828 347 aaKnown RBP18.66■□□□□ 0.58
STRADB-202ENST00000392249 CLDN11O75508 207 aa18.66■□□□□ 0.58
STRADB-202ENST00000392249 SERPINF2P08697 491 aa18.66■□□□□ 0.58
STRADB-202ENST00000392249 LEPRP48357 1165 aaKnown RBP18.66■□□□□ 0.58
STRADB-202ENST00000392249 ARHGAP8P85298 464 aa18.66■□□□□ 0.58
STRADB-202ENST00000392249 POU4F1Q01851 419 aa18.66■□□□□ 0.58
STRADB-202ENST00000392249 E2F5Q15329 346 aa18.66■□□□□ 0.58
STRADB-202ENST00000392249 LIPMQ5VYY2 423 aa18.66■□□□□ 0.58
STRADB-202ENST00000392249 C16orf59Q7L2K0 433 aa18.66■□□□□ 0.58
STRADB-202ENST00000392249 CILP2Q8IUL8 1156 aa18.66■□□□□ 0.58
STRADB-202ENST00000392249 EXOC2Q96KP1 924 aa18.66■□□□□ 0.58
STRADB-202ENST00000392249 GPR78Q96P69 363 aa18.66■□□□□ 0.58
STRADB-202ENST00000392249 OLFM1Q99784 485 aa18.66■□□□□ 0.58
STRADB-202ENST00000392249 DNAJC28Q9NX36 388 aa18.66■□□□□ 0.58
STRADB-202ENST00000392249 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP18.66■□□□□ 0.58
STRADB-202ENST00000392249 HSFX1Q9UBD0 423 aa18.66■□□□□ 0.58
STRADB-202ENST00000392249 UBA2Q9UBT2 640 aaPredicted RBP18.66■□□□□ 0.58
STRADB-202ENST00000392249 L3MBTL1Q9Y468 752 aa18.66■□□□□ 0.58
STRADB-202ENST00000392249 SLC7A4O43246 635 aa18.65■□□□□ 0.58
STRADB-202ENST00000392249 DIAPH2O60879 1101 aa18.65■□□□□ 0.58
STRADB-202ENST00000392249 H2AFYO75367 372 aaKnown RBP18.65■□□□□ 0.58
STRADB-202ENST00000392249 KLHL2O95198 593 aa18.65■□□□□ 0.58
STRADB-202ENST00000392249 FGF1P05230 155 aa18.65■□□□□ 0.58
STRADB-202ENST00000392249 CHRNGP07510 517 aa18.65■□□□□ 0.58
STRADB-202ENST00000392249 RHOCP08134 193 aa18.65■□□□□ 0.58
STRADB-202ENST00000392249 ALOX15P16050 662 aaPredicted RBP18.65■□□□□ 0.58
STRADB-202ENST00000392249 HLA-DPA1P20036 260 aa18.65■□□□□ 0.58
STRADB-202ENST00000392249 SLC8A1P32418 973 aa18.65■□□□□ 0.58
STRADB-202ENST00000392249 GRIA4P48058 902 aa18.65■□□□□ 0.58
STRADB-202ENST00000392249 OXCT1P55809 520 aa18.65■□□□□ 0.58
STRADB-202ENST00000392249 KDSRQ06136 332 aa18.65■□□□□ 0.58
STRADB-202ENST00000392249 TWF1Q12792 350 aa18.65■□□□□ 0.58
STRADB-202ENST00000392249 PTPRCAPQ14761 206 aa18.65■□□□□ 0.58
STRADB-202ENST00000392249 VEPH1Q14D04 833 aa18.65■□□□□ 0.58
STRADB-202ENST00000392249 BBS5Q8N3I7 341 aa18.65■□□□□ 0.58
STRADB-202ENST00000392249 GABPB2Q8TAK5 448 aaPredicted RBP18.65■□□□□ 0.58
STRADB-202ENST00000392249 ZNF689Q96CS4 500 aaPredicted RBP18.65■□□□□ 0.58
STRADB-202ENST00000392249 MGME1Q9BQP7 344 aa18.65■□□□□ 0.58
STRADB-202ENST00000392249 CINPQ9BW66 212 aaPredicted RBP18.65■□□□□ 0.58
STRADB-202ENST00000392249 SUDS3Q9H7L9 328 aaPredicted RBP18.65■□□□□ 0.58
STRADB-202ENST00000392249 SDAD1Q9NVU7 687 aaKnown RBP eCLIP18.65■□□□□ 0.58
STRADB-202ENST00000392249 MARCH4Q9P2E8 410 aaPredicted RBP18.65■□□□□ 0.58
STRADB-202ENST00000392249 SEPT3Q9UH03 358 aa18.65■□□□□ 0.58
STRADB-202ENST00000392249 TARM1B6A8C7 271 aa18.65■□□□□ 0.58
STRADB-202ENST00000392249 GSC2O15499 205 aa18.65■□□□□ 0.58
STRADB-202ENST00000392249 CCR10P46092 362 aa18.65■□□□□ 0.58
STRADB-202ENST00000392249 RGRP47804 291 aa18.65■□□□□ 0.58
STRADB-202ENST00000392249 ADGRF1Q5T601 910 aa18.65■□□□□ 0.58
STRADB-202ENST00000392249 RNF135Q8IUD6 432 aa18.65■□□□□ 0.58
STRADB-202ENST00000392249 TRMT2BQ96GJ1 504 aaKnown RBP18.65■□□□□ 0.58
STRADB-202ENST00000392249 TBATAQ96M53 351 aa18.65■□□□□ 0.58
STRADB-202ENST00000392249 CDH19Q9H159 772 aa18.65■□□□□ 0.58
STRADB-202ENST00000392249 MFSD1Q9H3U5 465 aa18.65■□□□□ 0.58
STRADB-202ENST00000392249 FAM96AQ9H5X1 160 aa18.65■□□□□ 0.58
STRADB-202ENST00000392249 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP18.64■□□□□ 0.57
STRADB-202ENST00000392249 KDELR3O43731 214 aa18.64■□□□□ 0.57
STRADB-202ENST00000392249 URODP06132 367 aa18.64■□□□□ 0.57
STRADB-202ENST00000392249 DNAJB1P25685 340 aa18.64■□□□□ 0.57
STRADB-202ENST00000392249 CLCN5P51795 746 aa18.64■□□□□ 0.57
STRADB-202ENST00000392249 NAGLUP54802 743 aa18.64■□□□□ 0.57
STRADB-202ENST00000392249 ZNF177Q13360 481 aaPredicted RBP18.64■□□□□ 0.57
STRADB-202ENST00000392249 BTG3Q14201 252 aaPredicted RBP18.64■□□□□ 0.57
STRADB-202ENST00000392249 CSHL1Q14406 222 aa18.64■□□□□ 0.57
STRADB-202ENST00000392249 CFAP157Q5JU67 520 aa18.64■□□□□ 0.57
STRADB-202ENST00000392249 ALG1LQ6GMV1 187 aa18.64■□□□□ 0.57
STRADB-202ENST00000392249 TEX9Q8N6V9 391 aa18.64■□□□□ 0.57
STRADB-202ENST00000392249 TDRD5Q8NAT2 981 aaKnown RBP18.64■□□□□ 0.57
STRADB-202ENST00000392249 HEXDCQ8WVB3 486 aa18.64■□□□□ 0.57
STRADB-202ENST00000392249 DNAJC1Q96KC8 554 aaKnown RBP18.64■□□□□ 0.57
STRADB-202ENST00000392249 PSKH2Q96QS6 385 aa18.64■□□□□ 0.57
STRADB-202ENST00000392249 HERC2P3Q9BVR0 1158 aa18.64■□□□□ 0.57
STRADB-202ENST00000392249 KLF16Q9BXK1 252 aaPredicted RBP18.64■□□□□ 0.57
STRADB-202ENST00000392249 COG4Q9H9E3 785 aa18.64■□□□□ 0.57
STRADB-202ENST00000392249 A0A087X1B8 175 aa18.64■□□□□ 0.57
STRADB-202ENST00000392249 A0A1B0GVM2 712 aa18.64■□□□□ 0.57
STRADB-202ENST00000392249 TCAF2A6NFQ2 919 aa18.64■□□□□ 0.57
STRADB-202ENST00000392249 CBX4O00257 560 aa18.64■□□□□ 0.57
STRADB-202ENST00000392249 DLX3O60479 287 aa18.64■□□□□ 0.57
STRADB-202ENST00000392249 SCNN1BP51168 640 aa18.64■□□□□ 0.57
STRADB-202ENST00000392249 TSNAXIP1Q2TAA8 658 aa18.64■□□□□ 0.57
STRADB-202ENST00000392249 DNAJB7Q7Z6W7 309 aaPredicted RBP18.64■□□□□ 0.57
STRADB-202ENST00000392249 FBXO27Q8NI29 283 aa18.64■□□□□ 0.57
STRADB-202ENST00000392249 MCUR1Q96AQ8 359 aa18.64■□□□□ 0.57
STRADB-202ENST00000392249 SGF29Q96ES7 293 aa18.64■□□□□ 0.57
STRADB-202ENST00000392249 NSMCE3Q96MG7 304 aa18.64■□□□□ 0.57
STRADB-202ENST00000392249 CYP2S1Q96SQ9 504 aa18.64■□□□□ 0.57
STRADB-202ENST00000392249 RETREG1Q9H6L5 497 aa18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms