RNA–Protein interactions for RNA: ENST00000391855.2

GGPS1-203, Transcript of geranylgeranyl diphosphate synthase 1, humanhuman

TSL 2 BASIC

Gene GGPS1, Length 1,407 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1-203ENST00000391855 NETO2Q8NC67 525 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 CXorf40AQ8TE69 158 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 ECHDC3Q96DC8 303 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 TSGA13Q96PP4 275 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 RNF157Q96PX1 679 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 IL21RQ9HBE5 538 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 KLHL11Q9NVR0 708 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 ATP8A1Q9Y2Q0 1164 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 PCDHB9Q9Y5E1 797 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 WDR87Q6ZQQ6 2873 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 TP53BP1Q12888 1972 aaPredicted RBP12.79□□□□□ -0.36
GGPS1-203ENST00000391855 CFAP69A5D8W1 941 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 SOWAHDA6NJG2 315 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 TOR1BO14657 336 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 FPGTO14772 594 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 SPINT1O43278 529 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 SH3BP5O60239 455 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 TM7SF2O76062 418 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 THEGLP0DJG4 465 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 TIMP2P16035 220 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 CR2P20023 1033 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 COMTP21964 271 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 CES1P23141 567 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 CCNCP24863 283 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 EPHA8P29322 1005 aaPredicted RBP12.79□□□□□ -0.36
GGPS1-203ENST00000391855 RGRP47804 291 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 SCNN1BP51168 640 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 N4BP2L1Q5TBK1 243 aaPredicted RBP12.79□□□□□ -0.36
GGPS1-203ENST00000391855 GCNT7Q6ZNI0 430 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 CAMK1DQ8IU85 385 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 TEX26Q8N6G2 289 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 PQLC3Q8N755 202 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 RAPGEF5Q92565 580 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 MAML1Q92585 1016 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 KLK6Q92876 244 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 HDAC11Q96DB2 347 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 IFT43Q96FT9 208 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 CDC6Q99741 560 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 BAG1Q99933 345 aaPredicted RBP12.79□□□□□ -0.36
GGPS1-203ENST00000391855 MAK16Q9BXY0 300 aaKnown RBP12.79□□□□□ -0.36
GGPS1-203ENST00000391855 SCUBE2Q9NQ36 999 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 PCOLCE2Q9UKZ9 415 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 ITM2BQ9Y287 266 aa12.79□□□□□ -0.36
GGPS1-203ENST00000391855 IGLON5A6NGN9 336 aa12.78□□□□□ -0.36
GGPS1-203ENST00000391855 BTNL10A8MVZ5 291 aa12.78□□□□□ -0.36
GGPS1-203ENST00000391855 APOL1O14791 398 aa12.78□□□□□ -0.36
GGPS1-203ENST00000391855 MUSKO15146 869 aa12.78□□□□□ -0.36
GGPS1-203ENST00000391855 MATN3O15232 486 aa12.78□□□□□ -0.36
GGPS1-203ENST00000391855 BUB1BO60566 1050 aaPredicted RBP12.78□□□□□ -0.36
GGPS1-203ENST00000391855 TRIM16O95361 564 aa12.78□□□□□ -0.36
GGPS1-203ENST00000391855 PAK4O96013 591 aaPredicted RBP12.78□□□□□ -0.36
GGPS1-203ENST00000391855 PMLP29590 882 aa12.78□□□□□ -0.36
GGPS1-203ENST00000391855 MMP12P39900 470 aa12.78□□□□□ -0.36
GGPS1-203ENST00000391855 RABIFP47224 123 aa12.78□□□□□ -0.36
GGPS1-203ENST00000391855 SLC9A4Q6AI14 798 aa12.78□□□□□ -0.36
GGPS1-203ENST00000391855 GLRX5Q86SX6 157 aa12.78□□□□□ -0.36
GGPS1-203ENST00000391855 SETD7Q8WTS6 366 aaKnown RBP12.78□□□□□ -0.36
GGPS1-203ENST00000391855 TMEM131Q92545 1883 aa12.78□□□□□ -0.36
GGPS1-203ENST00000391855 MYOCQ99972 504 aa12.78□□□□□ -0.36
GGPS1-203ENST00000391855 TRPM6Q9BX84 2022 aa12.78□□□□□ -0.36
GGPS1-203ENST00000391855 POLR1EQ9GZS1 481 aaKnown RBP12.78□□□□□ -0.36
GGPS1-203ENST00000391855 BRD8Q9H0E9 1235 aa12.78□□□□□ -0.36
GGPS1-203ENST00000391855 FZD3Q9NPG1 666 aa12.78□□□□□ -0.36
GGPS1-203ENST00000391855 GPR27Q9NS67 375 aa12.78□□□□□ -0.36
GGPS1-203ENST00000391855 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.78□□□□□ -0.36
GGPS1-203ENST00000391855 ALG6Q9Y672 507 aa12.78□□□□□ -0.36
GGPS1-203ENST00000391855 TRAFD1O14545 582 aaPredicted RBP12.77□□□□□ -0.37
GGPS1-203ENST00000391855 GIPC1O14908 333 aa12.77□□□□□ -0.37
GGPS1-203ENST00000391855 HTRA2O43464 458 aaPredicted RBP12.77□□□□□ -0.37
GGPS1-203ENST00000391855 CBFA2T3O75081 653 aa12.77□□□□□ -0.37
GGPS1-203ENST00000391855 NEBLO76041 1014 aa12.77□□□□□ -0.37
GGPS1-203ENST00000391855 ITGAVP06756 1048 aa12.77□□□□□ -0.37
GGPS1-203ENST00000391855 CA4P22748 312 aa12.77□□□□□ -0.37
GGPS1-203ENST00000391855 VAV2P52735 878 aa12.77□□□□□ -0.37
GGPS1-203ENST00000391855 SIM1P81133 766 aaPredicted RBP12.77□□□□□ -0.37
GGPS1-203ENST00000391855 GBE1Q04446 702 aa12.77□□□□□ -0.37
GGPS1-203ENST00000391855 PPIDQ08752 370 aaKnown RBP12.77□□□□□ -0.37
GGPS1-203ENST00000391855 TFDP2Q14188 446 aa12.77□□□□□ -0.37
GGPS1-203ENST00000391855 FGL2Q14314 439 aa12.77□□□□□ -0.37
GGPS1-203ENST00000391855 AGERQ15109 404 aa12.77□□□□□ -0.37
GGPS1-203ENST00000391855 TRIP6Q15654 476 aaKnown RBP12.77□□□□□ -0.37
GGPS1-203ENST00000391855 ALG1LQ6GMV1 187 aa12.77□□□□□ -0.37
GGPS1-203ENST00000391855 BZW1Q7L1Q6 419 aaKnown RBP12.77□□□□□ -0.37
GGPS1-203ENST00000391855 PTAR1Q7Z6K3 402 aaPredicted RBP12.77□□□□□ -0.37
GGPS1-203ENST00000391855 SPATS2Q86XZ4 545 aaKnown RBP12.77□□□□□ -0.37
GGPS1-203ENST00000391855 CCDC13Q8IYE1 715 aa12.77□□□□□ -0.37
GGPS1-203ENST00000391855 BAHD1Q8TBE0 780 aaPredicted RBP12.77□□□□□ -0.37
GGPS1-203ENST00000391855 SAP25Q8TEE9 199 aa12.77□□□□□ -0.37
GGPS1-203ENST00000391855 KLF6Q99612 283 aaPredicted RBP12.77□□□□□ -0.37
GGPS1-203ENST00000391855 PCDH12Q9NPG4 1184 aa12.77□□□□□ -0.37
GGPS1-203ENST00000391855 KCTD5Q9NXV2 234 aa12.77□□□□□ -0.37
GGPS1-203ENST00000391855 DTLQ9NZJ0 730 aa12.77□□□□□ -0.37
GGPS1-203ENST00000391855 GGT7Q9UJ14 662 aa12.77□□□□□ -0.37
GGPS1-203ENST00000391855 DCHS1Q96JQ0 3298 aa12.76□□□□□ -0.37
GGPS1-203ENST00000391855 C3orf70A6NLC5 250 aaPredicted RBP12.76□□□□□ -0.37
GGPS1-203ENST00000391855 KCNK3O14649 394 aa12.76□□□□□ -0.37
GGPS1-203ENST00000391855 PPP1R12AO14974 1030 aaPredicted RBP12.76□□□□□ -0.37
GGPS1-203ENST00000391855 PJA2O43164 708 aa12.76□□□□□ -0.37
GGPS1-203ENST00000391855 MMP20O60882 483 aa12.76□□□□□ -0.37
GGPS1-203ENST00000391855 CPP00450 1065 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms