RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 ZNF787Q6DD87 383 aa9.75□□□□□ -0.85
IFT88-203ENST00000389373 GDPD4Q6W3E5 623 aa9.75□□□□□ -0.85
IFT88-203ENST00000389373 FAM183BPQ6ZVS7 135 aa9.75□□□□□ -0.85
IFT88-203ENST00000389373 IRF2BP1Q8IU81 584 aa9.75□□□□□ -0.85
IFT88-203ENST00000389373 PASD1Q8IV76 773 aa9.75□□□□□ -0.85
IFT88-203ENST00000389373 UNC5BQ8IZJ1 945 aa9.75□□□□□ -0.85
IFT88-203ENST00000389373 ATL2Q8NHH9 583 aa9.75□□□□□ -0.85
IFT88-203ENST00000389373 APOBEC4Q8WW27 367 aaKnown RBP9.75□□□□□ -0.85
IFT88-203ENST00000389373 CCDC74BQ96LY2 380 aa9.75□□□□□ -0.85
IFT88-203ENST00000389373 WDR92Q96MX6 357 aa9.75□□□□□ -0.85
IFT88-203ENST00000389373 NUDT22Q9BRQ3 303 aa9.75□□□□□ -0.85
IFT88-203ENST00000389373 B3GNT4Q9C0J1 378 aa9.75□□□□□ -0.85
IFT88-203ENST00000389373 SUDS3Q9H7L9 328 aaPredicted RBP9.75□□□□□ -0.85
IFT88-203ENST00000389373 GPN2Q9H9Y4 310 aaPredicted RBP9.75□□□□□ -0.85
IFT88-203ENST00000389373 ACP6Q9NPH0 428 aa9.75□□□□□ -0.85
IFT88-203ENST00000389373 PIGVQ9NUD9 493 aa9.75□□□□□ -0.85
IFT88-203ENST00000389373 SLC39A1Q9NY26 324 aa9.75□□□□□ -0.85
IFT88-203ENST00000389373 RCOR1Q9UKL0 485 aa9.75□□□□□ -0.85
IFT88-203ENST00000389373 TP53TG5Q9Y2B4 290 aa9.75□□□□□ -0.85
IFT88-203ENST00000389373 B3GALT1Q9Y5Z6 326 aa9.75□□□□□ -0.85
IFT88-203ENST00000389373 SCN8AQ9UQD0 1980 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 TEX15Q9BXT5 2789 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 IGHV5-10-1A0A0J9YXX1 117 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 TRIM49BA6NDI0 452 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 RHPN2P1A8MT19 583 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 AREL1O15033 823 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 POP4O95707 220 aaKnown RBP9.74□□□□□ -0.85
IFT88-203ENST00000389373 CPNE6O95741 557 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 ZSCAN22P10073 491 aaPredicted RBP9.74□□□□□ -0.85
IFT88-203ENST00000389373 TFE3P19532 575 aaPredicted RBP9.74□□□□□ -0.85
IFT88-203ENST00000389373 COL8A1P27658 744 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 GNA15P30679 374 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 CSTF2P33240 577 aaKnown RBP eCLIP9.74□□□□□ -0.85
IFT88-203ENST00000389373 ACVRL1P37023 503 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 USP8P40818 1118 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 CD97P48960 835 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 PMS1P54277 932 aaKnown RBP9.74□□□□□ -0.85
IFT88-203ENST00000389373 MAZP56270 477 aaKnown RBP9.74□□□□□ -0.85
IFT88-203ENST00000389373 GNA12Q03113 381 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 DEUP1Q05D60 604 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 CDC20Q12834 499 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 HLTFQ14527 1009 aaKnown RBP eCLIP9.74□□□□□ -0.85
IFT88-203ENST00000389373 WSCD2Q2TBF2 565 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 BRMS1LQ5PSV4 323 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 KCTD16Q68DU8 428 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 SPECC1LQ69YQ0 1117 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 OGFOD3Q6PK18 319 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 C11orf57Q6ZUT1 292 aaPredicted RBP9.74□□□□□ -0.85
IFT88-203ENST00000389373 KDELC2Q7Z4H8 507 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 HEATR4Q86WZ0 1026 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 FAM129CQ86XR2 697 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 ZNF683Q8IZ20 524 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 EFCAB3Q8N7B9 438 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 NETO2Q8NC67 525 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 EHBP1Q8NDI1 1231 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 CCDC112Q8NEF3 446 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 CCL4L1Q8NHW4 92 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 SSC4DQ8WTU2 575 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 OR1E3Q8WZA6 343 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 KIAA1143Q96AT1 154 aaPredicted RBP9.74□□□□□ -0.85
IFT88-203ENST00000389373 PDXPQ96GD0 296 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 SLC45A3Q96JT2 553 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 KREMEN1Q96MU8 473 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 HAPLN3Q96S86 360 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 CPXM1Q96SM3 734 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 RBM15Q96T37 977 aaKnown RBP eCLIP9.74□□□□□ -0.85
IFT88-203ENST00000389373 ZMYND15Q9H091 742 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 UBE2TQ9NPD8 197 aaPredicted RBP9.74□□□□□ -0.85
IFT88-203ENST00000389373 MRPL40Q9NQ50 206 aaKnown RBP9.74□□□□□ -0.85
IFT88-203ENST00000389373 ASNSD1Q9NWL6 643 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 ARHGEF38Q9NXL2 777 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 HPSEQ9Y251 543 aa9.74□□□□□ -0.85
IFT88-203ENST00000389373 LRRK1Q38SD2 2015 aa9.73□□□□□ -0.85
IFT88-203ENST00000389373 LOC101059948A0A1B0GTJ6 334 aa9.73□□□□□ -0.85
IFT88-203ENST00000389373 FAM170AA1A519 330 aa9.73□□□□□ -0.85
IFT88-203ENST00000389373 EFCAB7A8K855 629 aa9.73□□□□□ -0.85
IFT88-203ENST00000389373 K7EM74 188 aa9.73□□□□□ -0.85
IFT88-203ENST00000389373 CAPN5O15484 640 aaPredicted RBP9.73□□□□□ -0.85
IFT88-203ENST00000389373 NUDT21O43809 227 aaKnown RBP9.73□□□□□ -0.85
IFT88-203ENST00000389373 DAB1O75553 588 aa9.73□□□□□ -0.85
IFT88-203ENST00000389373 CD160O95971 181 aa9.73□□□□□ -0.85
IFT88-203ENST00000389373 TIMP2P16035 220 aa9.73□□□□□ -0.85
IFT88-203ENST00000389373 OAS2P29728 719 aaKnown RBP9.73□□□□□ -0.85
IFT88-203ENST00000389373 CXCR3P49682 368 aa9.73□□□□□ -0.85
IFT88-203ENST00000389373 GCNT1Q02742 428 aa9.73□□□□□ -0.85
IFT88-203ENST00000389373 RAD51Q06609 339 aa9.73□□□□□ -0.85
IFT88-203ENST00000389373 ATP1A1-AS1Q5TC04 95 aa9.73□□□□□ -0.85
IFT88-203ENST00000389373 NKAIN2Q5VXU1 208 aa9.73□□□□□ -0.85
IFT88-203ENST00000389373 ATL3Q6DD88 541 aa9.73□□□□□ -0.85
IFT88-203ENST00000389373 FOXR2Q6PJQ5 311 aa9.73□□□□□ -0.85
IFT88-203ENST00000389373 ZNF783Q6ZMS7 281 aa9.73□□□□□ -0.85
IFT88-203ENST00000389373 KRBA2Q6ZNG9 492 aa9.73□□□□□ -0.85
IFT88-203ENST00000389373 ZNF354CQ86Y25 554 aa9.73□□□□□ -0.85
IFT88-203ENST00000389373 WDTC1Q8N5D0 677 aa9.73□□□□□ -0.85
IFT88-203ENST00000389373 OR2AP1Q8NGE2 309 aa9.73□□□□□ -0.85
IFT88-203ENST00000389373 LMO3Q8TAP4 145 aa9.73□□□□□ -0.85
IFT88-203ENST00000389373 ISG20Q96AZ6 181 aaKnown RBP9.73□□□□□ -0.85
IFT88-203ENST00000389373 OSBPL1AQ9BXW6 950 aa9.73□□□□□ -0.85
IFT88-203ENST00000389373 ZYG11BQ9C0D3 744 aa9.73□□□□□ -0.85
IFT88-203ENST00000389373 TMEM168Q9H0V1 697 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms