RNA–Protein interactions for RNA: ENST00000384622.1

RNU6-540P-201, Transcript of RNA, U6 small nuclear 540, pseudogene, humanhuman

BASIC

Gene RNU6-540P, Length 101 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-540P-201ENST00000384622 ZSCAN32Q9NX65 697 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 TNNQ9UQP3 1299 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 TNFSF13BQ9Y275 285 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 PCDHB2Q9Y5E7 798 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 ITPR2Q14571 2701 aa-0.59□□□□□ -2.5
RNU6-540P-201ENST00000384622 C3orf70A6NLC5 250 aaPredicted RBP-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 SLCO1B7G3V0H7 640 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 J3QKU1 62 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 SOCS3O14543 225 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 AHSGP02765 367 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 HMBSP08397 361 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 PLA2G4BP0C869 781 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 TMEM225BP0DP42 221 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 CHRNA5P30532 468 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 PGDP52209 483 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 IL10RAQ13651 578 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 SIRPB2Q5JXA9 342 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 STXBP5Q5T5C0 1151 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 IRGCQ6NXR0 463 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 KLHL24Q6TFL4 600 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 SH2D5Q6ZV89 423 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 INTS8Q75QN2 995 aaKnown RBP-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 DPP9Q86TI2 863 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 METTL16Q86W50 562 aaKnown RBP-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 CCDC25Q86WR0 208 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 KMT5CQ86Y97 462 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 DDX51Q8N8A6 666 aaKnown RBP eCLIP-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 SEMA4DQ92854 862 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 GPR78Q96P69 363 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 SLC2A13Q96QE2 648 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 TBX15Q96SF7 602 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 FAM110AQ9BQ89 295 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 STK33Q9BYT3 514 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 PANK2Q9BZ23 570 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 PLEKHA5Q9HAU0 1116 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 GNB4Q9HAV0 340 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 XPO5Q9HAV4 1204 aaKnown RBP eCLIP-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 MTPAPQ9NVV4 582 aaKnown RBP eCLIP-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 DNAJC28Q9NX36 388 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 ADPRHL2Q9NX46 363 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 RIMKLBQ9ULI2 386 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 PAM16Q9Y3D7 125 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 AKAP13Q12802 2813 aa-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 GCN1Q92616 2671 aaKnown RBP-0.6□□□□□ -2.51
RNU6-540P-201ENST00000384622 STK36Q9NRP7 1315 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 LYSTQ99698 3801 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 MAP1AP78559 2803 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 CCDC194A0A1B0GVG4 234 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 FAM227AF5H4B4 570 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 CCDC188H7C350 402 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 KRT33AO76009 404 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 RASAL1O95294 804 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 VNN2O95498 520 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 C22orf31O95567 290 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 HPP00738 406 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 ZNF44P15621 663 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 ELK1P19419 428 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 SDSP20132 328 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 MDKP21741 143 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 MATN1P21941 496 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 IGHMBP2P38935 993 aaKnown RBP-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 ADCYAP1R1P41586 468 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 UCP3P55916 312 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 KCNJ10P78508 379 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 EXOSC9Q06265 439 aaKnown RBP-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 TBL3Q12788 808 aaKnown RBP-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 ODF1Q14990 250 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 OASLQ15646 514 aaKnown RBP-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 KIAA1644Q3SXP7 199 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 FNDC3BQ53EP0 1204 aaKnown RBP-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 ARMCX5Q6P1M9 558 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 ABI3BPQ7Z7G0 1075 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 ZNF589Q86UQ0 364 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 ODF3L1Q8IXM7 274 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 CMIPQ8IY22 773 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 MAML2Q8IZL2 1156 aaPredicted RBP-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 PRSS33Q8NF86 280 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 SPATA22Q8NHS9 363 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 GIPC2Q8TF65 315 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 APPBP2Q92624 585 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 CDCA5Q96FF9 252 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 SCRN2Q96FV2 425 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 P2RX7Q99572 595 aaKnown RBP-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 BCL2L13Q9BXK5 485 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 ACBD3Q9H3P7 528 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 PPANQ9NQ55 473 aaKnown RBP-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 ZNF229Q9UJW7 825 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 PSAT1Q9Y617 370 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 ITPR3Q14573 2671 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 CELSR1Q9NYQ6 3014 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 HSPG2P98160 4391 aa-0.61□□□□□ -2.51
RNU6-540P-201ENST00000384622 CEP295Q9C0D2 2601 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 ZNF840PA6NDX5 716 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 AGPSO00116 658 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 CD3EAPO15446 510 aaKnown RBP-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 NDUFS7O75251 213 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 PARP1P09874 1014 aaKnown RBP-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 GYS1P13807 737 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 TGM2P21980 687 aa-0.62□□□□□ -2.51
RNU6-540P-201ENST00000384622 ALDH1B1P30837 517 aa-0.62□□□□□ -2.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms