RNA–Protein interactions for RNA: ENST00000380992.5

TSSC4-202, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TSSC4, Length 992 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-202ENST00000380992 PCDH18Q9HCL0 1135 aa16.63■□□□□ 0.25
TSSC4-202ENST00000380992 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.63■□□□□ 0.25
TSSC4-202ENST00000380992 LHX3Q9UBR4 397 aa16.63■□□□□ 0.25
TSSC4-202ENST00000380992 UBA2Q9UBT2 640 aaPredicted RBP16.63■□□□□ 0.25
TSSC4-202ENST00000380992 IGF2RP11717 2491 aa16.63■□□□□ 0.25
TSSC4-202ENST00000380992 ANKRD36A6QL64 1941 aa16.62■□□□□ 0.25
TSSC4-202ENST00000380992 MYLKQ15746 1914 aa16.62■□□□□ 0.25
TSSC4-202ENST00000380992 LRRK1Q38SD2 2015 aa16.62■□□□□ 0.25
TSSC4-202ENST00000380992 ARHGAP42A6NI28 874 aa16.62■□□□□ 0.25
TSSC4-202ENST00000380992 NEMP1O14524 444 aa16.62■□□□□ 0.25
TSSC4-202ENST00000380992 RAD51BO15315 384 aa16.62■□□□□ 0.25
TSSC4-202ENST00000380992 SPINT1O43278 529 aa16.62■□□□□ 0.25
TSSC4-202ENST00000380992 PIAS2O75928 621 aa16.62■□□□□ 0.25
TSSC4-202ENST00000380992 CDC25BP30305 580 aa16.62■□□□□ 0.25
TSSC4-202ENST00000380992 MAN1A1P33908 653 aa16.62■□□□□ 0.25
TSSC4-202ENST00000380992 PFN3P60673 137 aa16.62■□□□□ 0.25
TSSC4-202ENST00000380992 HNRNPKP61978 463 aaKnown RBP eCLIP16.62■□□□□ 0.25
TSSC4-202ENST00000380992 NSUN2Q08J23 767 aaKnown RBP eCLIP16.62■□□□□ 0.25
TSSC4-202ENST00000380992 DNAJC3Q13217 504 aa16.62■□□□□ 0.25
TSSC4-202ENST00000380992 DHRS13Q6UX07 377 aa16.62■□□□□ 0.25
TSSC4-202ENST00000380992 TP53INP2Q8IXH6 220 aa16.62■□□□□ 0.25
TSSC4-202ENST00000380992 CCDC170Q8IYT3 715 aa16.62■□□□□ 0.25
TSSC4-202ENST00000380992 LZTR1Q8N653 840 aa16.62■□□□□ 0.25
TSSC4-202ENST00000380992 PDCD7Q8N8D1 485 aaKnown RBP16.62■□□□□ 0.25
TSSC4-202ENST00000380992 NETO2Q8NC67 525 aa16.62■□□□□ 0.25
TSSC4-202ENST00000380992 ZNF641Q96N77 438 aaPredicted RBP16.62■□□□□ 0.25
TSSC4-202ENST00000380992 CSPG4P5Q96PW8 444 aa16.62■□□□□ 0.25
TSSC4-202ENST00000380992 MYOCQ99972 504 aa16.62■□□□□ 0.25
TSSC4-202ENST00000380992 SLC39A8Q9C0K1 460 aa16.62■□□□□ 0.25
TSSC4-202ENST00000380992 ETNK2Q9NVF9 386 aa16.62■□□□□ 0.25
TSSC4-202ENST00000380992 KNTC1P50748 2209 aa16.61■□□□□ 0.25
TSSC4-202ENST00000380992 TSPAN11A1L157 253 aa16.61■□□□□ 0.25
TSSC4-202ENST00000380992 NEMP2A6NFY4 417 aa16.61■□□□□ 0.25
TSSC4-202ENST00000380992 SOWAHDA6NJG2 315 aa16.61■□□□□ 0.25
TSSC4-202ENST00000380992 J3KR12 359 aa16.61■□□□□ 0.25
TSSC4-202ENST00000380992 RIOK3O14730 519 aaKnown RBP16.61■□□□□ 0.25
TSSC4-202ENST00000380992 CSF2P04141 144 aa16.61■□□□□ 0.25
TSSC4-202ENST00000380992 CD48P09326 243 aa16.61■□□□□ 0.25
TSSC4-202ENST00000380992 GIMD1P0DJR0 217 aa16.61■□□□□ 0.25
TSSC4-202ENST00000380992 TIMP2P16035 220 aa16.61■□□□□ 0.25
TSSC4-202ENST00000380992 AMPD1P23109 780 aa16.61■□□□□ 0.25
TSSC4-202ENST00000380992 PAPOLAP51003 745 aaKnown RBP16.61■□□□□ 0.25
TSSC4-202ENST00000380992 YPEL5P62699 121 aa16.61■□□□□ 0.25
TSSC4-202ENST00000380992 FZD2Q14332 565 aa16.61■□□□□ 0.25
TSSC4-202ENST00000380992 RFTN1Q14699 578 aaPredicted RBP16.61■□□□□ 0.25
TSSC4-202ENST00000380992 TMEM52BQ4KMG9 183 aa16.61■□□□□ 0.25
TSSC4-202ENST00000380992 TMEM139Q8IV31 216 aa16.61■□□□□ 0.25
TSSC4-202ENST00000380992 RFFLQ8WZ73 363 aa16.61■□□□□ 0.25
TSSC4-202ENST00000380992 CELF6Q96J87 481 aaKnown RBP16.61■□□□□ 0.25
TSSC4-202ENST00000380992 TUBGCP5Q96RT8 1024 aa16.61■□□□□ 0.25
TSSC4-202ENST00000380992 C1QTNF7Q9BXJ2 289 aa16.61■□□□□ 0.25
TSSC4-202ENST00000380992 SUV39H2Q9H5I1 410 aa16.61■□□□□ 0.25
TSSC4-202ENST00000380992 GRPEL1Q9HAV7 217 aa16.61■□□□□ 0.25
TSSC4-202ENST00000380992 TFR2Q9UP52 801 aa16.61■□□□□ 0.25
TSSC4-202ENST00000380992 CSNK1G3Q9Y6M4 447 aa16.61■□□□□ 0.25
TSSC4-202ENST00000380992 GOLGA4Q13439 2230 aaKnown RBP16.61■□□□□ 0.25
TSSC4-202ENST00000380992 CHD6Q8TD26 2715 aa16.61■□□□□ 0.25
TSSC4-202ENST00000380992 TRABD2BA6NFA1 517 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 H3BRJ5 948 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 TRIM38O00635 465 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 SCAMP1O15126 338 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 DAPK3O43293 454 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 SIGLEC6O43699 453 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 SDC3O75056 442 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 TM7SF2O76062 418 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 HNF1BP35680 557 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 MAGEA1P43355 309 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 E2F1Q01094 437 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 IL10RBQ08334 325 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 ELP6Q0PNE2 266 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 MMRN1Q13201 1228 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 PTK2BQ14289 1009 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 MESDQ14696 234 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 AGERQ15109 404 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 UGP2Q16851 508 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 HS1BP3Q53T59 392 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 RAD9BQ6WBX8 426 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 TMTC1Q8IUR5 882 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 RHOT2Q8IXI1 618 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 FAM181AQ8N9Y4 354 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 DUSP23Q9BVJ7 150 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 USP29Q9HBJ7 922 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 UCKL1Q9NWZ5 548 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 NLGN3Q9NZ94 848 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 LCMT1Q9UIC8 334 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 GGT7Q9UJ14 662 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 REXO2Q9Y3B8 237 aaKnown RBP16.6■□□□□ 0.25
TSSC4-202ENST00000380992 PCDHA13Q9Y5I0 950 aa16.6■□□□□ 0.25
TSSC4-202ENST00000380992 EPN1Q9Y6I3 576 aaPredicted RBP16.6■□□□□ 0.25
TSSC4-202ENST00000380992 DSPP15924 2871 aaKnown RBP16.6■□□□□ 0.25
TSSC4-202ENST00000380992 PALMO75781 387 aa16.59■□□□□ 0.25
TSSC4-202ENST00000380992 ALPPL2P10696 532 aa16.59■□□□□ 0.25
TSSC4-202ENST00000380992 CKMT1AP12532 417 aa16.59■□□□□ 0.25
TSSC4-202ENST00000380992 NME1P15531 152 aaKnown RBP16.59■□□□□ 0.25
TSSC4-202ENST00000380992 ARHGAP25P42331 645 aa16.59■□□□□ 0.25
TSSC4-202ENST00000380992 HADHBP55084 474 aaKnown RBP16.59■□□□□ 0.25
TSSC4-202ENST00000380992 CDH6P55285 790 aa16.59■□□□□ 0.25
TSSC4-202ENST00000380992 DPYSL3Q14195 570 aa16.59■□□□□ 0.25
TSSC4-202ENST00000380992 HADHQ16836 314 aaKnown RBP16.59■□□□□ 0.25
TSSC4-202ENST00000380992 TMCO4Q5TGY1 634 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms