RNA–Protein interactions for RNA: ENST00000380805.6

GMDS-201, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 1,743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-201ENST00000380805 LAMA2P24043 3122 aaKnown RBP19.38■□□□□ 0.69
GMDS-201ENST00000380805 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP19.38■□□□□ 0.69
GMDS-201ENST00000380805 GREM1O60565 184 aa19.38■□□□□ 0.69
GMDS-201ENST00000380805 SBK3P0C264 359 aa19.38■□□□□ 0.69
GMDS-201ENST00000380805 PSMA3P25788 255 aa19.38■□□□□ 0.69
GMDS-201ENST00000380805 ARRB2P32121 409 aa19.38■□□□□ 0.69
GMDS-201ENST00000380805 CLCN5P51795 746 aa19.38■□□□□ 0.69
GMDS-201ENST00000380805 NSUN2Q08J23 767 aaKnown RBP eCLIP19.38■□□□□ 0.69
GMDS-201ENST00000380805 ZNF177Q13360 481 aaPredicted RBP19.38■□□□□ 0.69
GMDS-201ENST00000380805 ZYG11AQ6WRX3 759 aa19.38■□□□□ 0.69
GMDS-201ENST00000380805 ATG14Q6ZNE5 492 aa19.38■□□□□ 0.69
GMDS-201ENST00000380805 CILP2Q8IUL8 1156 aa19.38■□□□□ 0.69
GMDS-201ENST00000380805 SLC41A1Q8IVJ1 513 aa19.38■□□□□ 0.69
GMDS-201ENST00000380805 FAM217AQ8IXS0 508 aa19.38■□□□□ 0.69
GMDS-201ENST00000380805 STYXQ8WUJ0 223 aa19.38■□□□□ 0.69
GMDS-201ENST00000380805 WBP2Q969T9 261 aa19.38■□□□□ 0.69
GMDS-201ENST00000380805 PTCD3Q96EY7 689 aaKnown RBP19.38■□□□□ 0.69
GMDS-201ENST00000380805 IFT43Q96FT9 208 aa19.38■□□□□ 0.69
GMDS-201ENST00000380805 GPR78Q96P69 363 aa19.38■□□□□ 0.69
GMDS-201ENST00000380805 ZBP1Q9H171 429 aa19.38■□□□□ 0.69
GMDS-201ENST00000380805 TLE6Q9H808 572 aa19.38■□□□□ 0.69
GMDS-201ENST00000380805 FBXO6Q9NRD1 293 aaPredicted RBP19.38■□□□□ 0.69
GMDS-201ENST00000380805 OXSMQ9NWU1 459 aa19.38■□□□□ 0.69
GMDS-201ENST00000380805 ACOT9Q9Y305 439 aa19.38■□□□□ 0.69
GMDS-201ENST00000380805 ASB3Q9Y575 518 aa19.38■□□□□ 0.69
GMDS-201ENST00000380805 CEP290O15078 2479 aa19.38■□□□□ 0.69
GMDS-201ENST00000380805 A0A087X1B8 175 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 TTC24A2A3L6 582 aaPredicted RBP19.37■□□□□ 0.69
GMDS-201ENST00000380805 FCHO1O14526 889 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 TEX28O15482 410 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 PHGDHO43175 533 aaKnown RBP19.37■□□□□ 0.69
GMDS-201ENST00000380805 NDST3O95803 873 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 KRT16P08779 473 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 ACRP10323 421 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 AQP5P55064 265 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 ITGA9Q13797 1035 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 TSNAXIP1Q2TAA8 658 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 PABPC1LQ4VXU2 614 aaKnown RBP19.37■□□□□ 0.69
GMDS-201ENST00000380805 Q6ZNB5 142 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 RAPH1Q70E73 1250 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 CEP97Q8IW35 865 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 PARP9Q8IXQ6 854 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 TMEM199Q8N511 208 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 SREK1Q8WXA9 508 aaKnown RBP19.37■□□□□ 0.69
GMDS-201ENST00000380805 CINPQ9BW66 212 aaPredicted RBP19.37■□□□□ 0.69
GMDS-201ENST00000380805 ZNF334Q9HCZ1 680 aaPredicted RBP19.37■□□□□ 0.69
GMDS-201ENST00000380805 HAO1Q9UJM8 370 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 TRIM33Q9UPN9 1127 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 DNAJC16Q9Y2G8 782 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 ARIH1Q9Y4X5 557 aaPredicted RBP19.37■□□□□ 0.69
GMDS-201ENST00000380805 E2F8A0AVK6 867 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 TRIM13O60858 407 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 LYPLA1O75608 230 aaPredicted RBP19.37■□□□□ 0.69
GMDS-201ENST00000380805 GJB3O75712 270 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 KLHL2O95198 593 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 CBX6O95503 412 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 LINC00271P0C7V0 271 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 TAS2R39P59534 338 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 FAM117BQ6P1L5 589 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 C16orf59Q7L2K0 433 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 KIF2BQ8N4N8 673 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 GPR150Q8NGU9 434 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 BRSK1Q8TDC3 778 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 ADAMTS19Q8TE59 1207 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 PPP4R1Q8TF05 950 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 TSNARE1Q96NA8 513 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 RAB3IPQ96QF0 476 aaPredicted RBP19.37■□□□□ 0.69
GMDS-201ENST00000380805 OMDQ99983 421 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 SORCS3Q9UPU3 1222 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 SSX2IPQ9Y2D8 614 aa19.37■□□□□ 0.69
GMDS-201ENST00000380805 ANKRD36A6QL64 1941 aa19.36■□□□□ 0.69
GMDS-201ENST00000380805 C2orf71A6NGG8 1288 aa19.36■□□□□ 0.69
GMDS-201ENST00000380805 PALM2-AKAP2B1ALY0 433 aaPredicted RBP19.36■□□□□ 0.69
GMDS-201ENST00000380805 CTSAP10619 480 aa19.36■□□□□ 0.69
GMDS-201ENST00000380805 PTPN4P29074 926 aa19.36■□□□□ 0.69
GMDS-201ENST00000380805 ZBTB16Q05516 673 aa19.36■□□□□ 0.69
GMDS-201ENST00000380805 TUBB3Q13509 450 aa19.36■□□□□ 0.69
GMDS-201ENST00000380805 AUTS2Q8WXX7 1259 aa19.36■□□□□ 0.69
GMDS-201ENST00000380805 UTP4Q969X6 686 aaKnown RBP19.36■□□□□ 0.69
GMDS-201ENST00000380805 NMUR2Q9GZQ4 415 aa19.36■□□□□ 0.69
GMDS-201ENST00000380805 TASP1Q9H6P5 420 aa19.36■□□□□ 0.69
GMDS-201ENST00000380805 DNAJC28Q9NX36 388 aa19.36■□□□□ 0.69
GMDS-201ENST00000380805 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP19.36■□□□□ 0.69
GMDS-201ENST00000380805 RANBP2P49792 3224 aaKnown RBP19.36■□□□□ 0.69
GMDS-201ENST00000380805 CAPN14A8MX76 684 aa19.35■□□□□ 0.69
GMDS-201ENST00000380805 ZNF195O14628 629 aa19.35■□□□□ 0.69
GMDS-201ENST00000380805 AURKAO14965 403 aa19.35■□□□□ 0.69
GMDS-201ENST00000380805 INSIG1O15503 277 aa19.35■□□□□ 0.69
GMDS-201ENST00000380805 CCDC22O60826 627 aa19.35■□□□□ 0.69
GMDS-201ENST00000380805 WISP3O95389 354 aaPredicted RBP19.35■□□□□ 0.69
GMDS-201ENST00000380805 SERPINA6P08185 405 aa19.35■□□□□ 0.69
GMDS-201ENST00000380805 MBL2P11226 248 aaPredicted RBP19.35■□□□□ 0.69
GMDS-201ENST00000380805 RGRP47804 291 aa19.35■□□□□ 0.69
GMDS-201ENST00000380805 ARSDP51689 593 aa19.35■□□□□ 0.69
GMDS-201ENST00000380805 CYTH1Q15438 398 aa19.35■□□□□ 0.69
GMDS-201ENST00000380805 TBCCQ15814 346 aa19.35■□□□□ 0.69
GMDS-201ENST00000380805 LIPMQ5VYY2 423 aa19.35■□□□□ 0.69
GMDS-201ENST00000380805 LRRC8EQ6NSJ5 796 aa19.35■□□□□ 0.69
GMDS-201ENST00000380805 CNSTQ6PJW8 725 aa19.35■□□□□ 0.69
GMDS-201ENST00000380805 ALYREFQ86V81 257 aaKnown RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms