RNA–Protein interactions for RNA: ENST00000379143.9

PCNA-201, Transcript of proliferating cell nuclear antigen, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCNA, Length 1,344 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNA-201ENST00000379143 ZNF148Q9UQR1 794 aa12.03□□□□□ -0.48
PCNA-201ENST00000379143 R3HDM2Q9Y2K5 976 aaKnown RBP12.03□□□□□ -0.48
PCNA-201ENST00000379143 SAR1BQ9Y6B6 198 aa12.03□□□□□ -0.48
PCNA-201ENST00000379143 TBC1D3DA0A087WVF3 549 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 TBC1D3IA0A087WXS9 549 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 TBC1D3EA0A087X179 549 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 TBC1D3KA0A087X1G2 549 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 GOLGA6L10A0A0M3HER8 536 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 TBC1D3FA6NER0 549 aaPredicted RBP12.02□□□□□ -0.49
PCNA-201ENST00000379143 C5orf60A6NFR6 353 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 TBC1D3LB9A6J9 549 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 TSPAN6O43657 245 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 OPHN1O60890 802 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 GJB3O75712 270 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 TUBB4AP04350 444 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 ITGAVP06756 1048 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 TBC1D3HP0C7X1 549 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 BCKDHBP21953 392 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 CASQ1P31415 396 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 NUDT1P36639 197 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 RPL26P61254 145 aaKnown RBP12.02□□□□□ -0.49
PCNA-201ENST00000379143 ELP6Q0PNE2 266 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 SIX1Q15475 284 aaPredicted RBP12.02□□□□□ -0.49
PCNA-201ENST00000379143 OASLQ15646 514 aaKnown RBP12.02□□□□□ -0.49
PCNA-201ENST00000379143 UGP2Q16851 508 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 ARMC12Q5T9G4 340 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 TBC1D3GQ6DHY5 549 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 LAIR1Q6GTX8 287 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 TBC1D3CQ6IPX1 549 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 ERAP2Q6P179 960 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 TMEFF1Q8IYR6 380 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 TBC1D3Q8IZP1 549 aaPredicted RBP12.02□□□□□ -0.49
PCNA-201ENST00000379143 C17orf53Q8N3J3 647 aaPredicted RBP12.02□□□□□ -0.49
PCNA-201ENST00000379143 PDCD6IPQ8WUM4 868 aaKnown RBP12.02□□□□□ -0.49
PCNA-201ENST00000379143 C1orf54Q8WWF1 131 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 ATG4AQ8WYN0 398 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 SPATA13Q96N96 652 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 FCRL5Q96RD9 977 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 TMEM121Q9BTD3 319 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 USP29Q9HBJ7 922 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 VPS45Q9NRW7 570 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 RNF14Q9UBS8 474 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 RPL26L1Q9UNX3 145 aaKnown RBP12.02□□□□□ -0.49
PCNA-201ENST00000379143 SMG5Q9UPR3 1016 aaKnown RBP12.02□□□□□ -0.49
PCNA-201ENST00000379143 DRG1Q9Y295 367 aaKnown RBP12.02□□□□□ -0.49
PCNA-201ENST00000379143 PCDHB9Q9Y5E1 797 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 PCDHGC4Q9Y5F7 938 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 RAI2Q9Y5P3 530 aa12.02□□□□□ -0.49
PCNA-201ENST00000379143 KMT2BQ9UMN6 2715 aaPredicted RBP12.01□□□□□ -0.49
PCNA-201ENST00000379143 TTC24A2A3L6 582 aaPredicted RBP12.01□□□□□ -0.49
PCNA-201ENST00000379143 FAM47DPA6NHR8 397 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 METTL12A8MUP2 240 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 UPK3BL1B0FP48 263 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 UPK3BL2E5RIL1 263 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 PLK4O00444 970 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 NEMP1O14524 444 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 ANXA9O76027 345 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 PGLSO95336 258 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 CPP00450 1065 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 LMNAP02545 664 aaKnown RBP12.01□□□□□ -0.49
PCNA-201ENST00000379143 MMP2P08253 660 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 TIMP2P16035 220 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 ACTN2P35609 894 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 CD86P42081 329 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 TNNT3P45378 269 aaPredicted RBP12.01□□□□□ -0.49
PCNA-201ENST00000379143 CCR5P51681 352 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 TAS2R38P59533 333 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 SKOR1P84550 965 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 LMNB2Q03252 620 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 NIPAL4Q0D2K0 466 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 TRAF2Q12933 501 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 PRPSAP1Q14558 356 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 P3H1Q32P28 736 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 WDR45BQ5MNZ6 344 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 ANKRD20A2Q5SQ80 823 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 ANKRD20A1Q5TYW2 823 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 ANKRD20A3Q5VUR7 823 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 LYSMD4Q5XG99 296 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 KIAA0895LQ68EN5 471 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 KIAA1161Q6NSJ0 714 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 TRIM69Q86WT6 500 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.01□□□□□ -0.49
PCNA-201ENST00000379143 COG1Q8WTW3 980 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 LRRC45Q96CN5 670 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 RTP4Q96DX8 246 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 FEM1CQ96JP0 617 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 HSPA12BQ96MM6 686 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 TDRD1Q9BXT4 1180 aaKnown RBP12.01□□□□□ -0.49
PCNA-201ENST00000379143 ADGRE3Q9BY15 652 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 GBA3Q9H227 469 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 C10orf88Q9H8K7 445 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 RSPH14Q9UHP6 348 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 PHTF1Q9UMS5 762 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 PCDHGA5Q9Y5G8 931 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 FADS3Q9Y5Q0 445 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 ANKRD36A6QL64 1941 aa12.01□□□□□ -0.49
PCNA-201ENST00000379143 EP300Q09472 2414 aaPredicted RBP12.01□□□□□ -0.49
PCNA-201ENST00000379143 GOLGA6CA6NDK9 693 aa12□□□□□ -0.49
PCNA-201ENST00000379143 GOLGA6BA6NDN3 693 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms