RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 IRF9Q00978 393 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 CDH17Q12864 832 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 USP10Q14694 798 aaKnown RBP8.27□□□□□ -1.09
PTPRR-203ENST00000378778 AMHR2Q16671 573 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 SEZ6Q53EL9 994 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 AGKQ53H12 422 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 GPR107Q5VW38 600 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 EGFLAMQ63HQ2 1017 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 SNRNP48Q6IEG0 339 aaKnown RBP8.27□□□□□ -1.09
PTPRR-203ENST00000378778 PRR23CQ6ZRP0 262 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 GK5Q6ZS86 529 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 PLPPR4Q7Z2D5 763 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 FSTL5Q8N475 847 aaPredicted RBP8.27□□□□□ -1.09
PTPRR-203ENST00000378778 CHST13Q8NET6 341 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 FBXO22Q8NEZ5 403 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 SEPT1Q8WYJ6 367 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 TSPAN17Q96FV3 270 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 BTN2A3PQ96KV6 586 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 UBXN10Q96LJ8 280 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 TSPAN18Q96SJ8 248 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 GLIS2Q9BZE0 524 aaPredicted RBP8.27□□□□□ -1.09
PTPRR-203ENST00000378778 CDT1Q9H211 546 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 MOV10Q9HCE1 1003 aaKnown RBP8.27□□□□□ -1.09
PTPRR-203ENST00000378778 SETD4Q9NVD3 440 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 TLL2Q9Y6L7 1015 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 DICER1Q9UPY3 1922 aaKnown RBP8.27□□□□□ -1.09
PTPRR-203ENST00000378778 EP400Q96L91 3159 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 A0A1B0GTW7 788 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 TNPO2O14787 897 aaKnown RBP8.27□□□□□ -1.09
PTPRR-203ENST00000378778 PFDN6O15212 129 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 DAB1O75553 588 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 AMHP03971 560 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 BCAT1P54687 386 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 CDH15P55291 814 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 BST2Q10589 180 aaKnown RBP8.27□□□□□ -1.09
PTPRR-203ENST00000378778 TMEM132DQ14C87 1099 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 SKIV2LQ15477 1246 aaKnown RBP8.27□□□□□ -1.09
PTPRR-203ENST00000378778 SLC25A52Q3SY17 297 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 PID1Q7Z2X4 250 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 BNIPLQ7Z465 357 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 PROSER1Q86XN7 944 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 AGBL3Q8NEM8 1001 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 BEST2Q8NFU1 509 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 ZSCAN18Q8TBC5 510 aaPredicted RBP8.27□□□□□ -1.09
PTPRR-203ENST00000378778 CANT1Q8WVQ1 401 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 NTAN1Q96AB6 310 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 ZBED3Q96IU2 234 aaPredicted RBP8.27□□□□□ -1.09
PTPRR-203ENST00000378778 GPR78Q96P69 363 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 DCUN1D5Q9BTE7 237 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 HGH1Q9BTY7 390 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 TEX13BQ9BXU2 312 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 RPAP3Q9H6T3 665 aaPredicted RBP8.27□□□□□ -1.09
PTPRR-203ENST00000378778 SLC17A6Q9P2U8 582 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 PACSIN3Q9UKS6 424 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 SLC39A10Q9ULF5 831 aa8.27□□□□□ -1.09
PTPRR-203ENST00000378778 LCTP09848 1927 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 A0A1W2PPW3 197 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 RBM47A0AV96 593 aaKnown RBP8.26□□□□□ -1.09
PTPRR-203ENST00000378778 LACTBL1A8MY62 500 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 PLOD2O00469 737 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 SLC22A1O15245 554 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 MFSD11O43934 449 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 TIPRLO75663 272 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 CSPG5O95196 566 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 HOXB8P17481 243 aaPredicted RBP8.26□□□□□ -1.09
PTPRR-203ENST00000378778 PAMP19021 973 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 MATKP42679 507 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 RPS9P46781 194 aaKnown RBP8.26□□□□□ -1.09
PTPRR-203ENST00000378778 EEFSECP57772 596 aaKnown RBP8.26□□□□□ -1.09
PTPRR-203ENST00000378778 PRAMEP78395 509 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 CTBSQ01459 385 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 GRM3Q14832 879 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 CLPPQ16740 277 aaPredicted RBP8.26□□□□□ -1.09
PTPRR-203ENST00000378778 FAM83EQ2M2I3 478 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 PCID2Q5JVF3 399 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 AGAP9Q5VTM2 703 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 TMEM198Q66K66 360 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 PMF1Q6P1K2 205 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 PARP8Q8N3A8 854 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 AADATQ8N5Z0 425 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 PCDH20Q8N6Y1 951 aaKnown RBP8.26□□□□□ -1.09
PTPRR-203ENST00000378778 RNF148Q8N7C7 305 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 RNF149Q8NC42 400 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 OR52K1Q8NGK4 314 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 RNF139Q8WU17 664 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 STARD8Q92502 1023 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 HDAC2Q92769 488 aaKnown RBP8.26□□□□□ -1.09
PTPRR-203ENST00000378778 HDAC11Q96DB2 347 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 BDH2Q9BUT1 245 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 PCDHAC1Q9H158 963 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 ANLNQ9NQW6 1124 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 KLHL8Q9P2G9 620 aaPredicted RBP8.26□□□□□ -1.09
PTPRR-203ENST00000378778 HMGXB4Q9UGU5 601 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 PLXNA1Q9UIW2 1896 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 H0YIN7 160 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 TK2O00142 265 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 ACOX3O15254 700 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 AQP9O43315 295 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 CACNG3O60359 315 aa8.26□□□□□ -1.09
PTPRR-203ENST00000378778 MRPS14O60783 128 aaKnown RBP8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms