RNA–Protein interactions for RNA: ENST00000378133.4

PCDHA1-201, Transcript of protocadherin alpha 1, humanhuman

BASIC

Gene PCDHA1, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA1-201ENST00000378133 ZYG11AQ6WRX3 759 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 HERC6Q8IVU3 1022 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 SPATA6LQ8N4H0 392 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 FAM47BQ8NA70 645 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 TEKT5Q96M29 485 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 GPR22Q99680 433 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 SMOQ99835 787 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 COLEC11Q9BWP8 271 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 UNKQ9C0B0 810 aaKnown RBP16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 PAIP1Q9H074 479 aaKnown RBP16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 WDCPQ9H6R7 721 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 VTI1BQ9UEU0 232 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 OR12D3Q9UGF7 316 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 CLEC11AQ9Y240 323 aa16.75■□□□□ 0.27
PCDHA1-201ENST00000378133 SMIM35A0A1B0GVV1 85 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 HTRA2O43464 458 aaPredicted RBP16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 E2F6O75461 281 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 AHSGP02765 367 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 GABRB3P28472 473 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 CCR3P51677 355 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 HK2P52789 917 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 PHEXP78562 749 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 GALNT2Q10471 571 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 SCAPQ12770 1279 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 ZNF460Q14592 562 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 ZBED5Q49AG3 693 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 ZBTB49Q6ZSB9 765 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 SMG8Q8ND04 991 aaKnown RBP16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 PPWD1Q96BP3 646 aaKnown RBP16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 COX4I2Q96KJ9 171 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 WDR37Q9Y2I8 494 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 RAD54BQ9Y620 910 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 TRIP12Q14669 1992 aaPredicted RBP16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 MYBPHLA2RUH7 354 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 MTSS1O43312 755 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 AXLP30530 894 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 HCAR3P49019 387 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 AIF1P55008 147 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 CDH17Q12864 832 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 ARL13BQ3SXY8 428 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 NCCRP1Q6ZVX7 275 aaPredicted RBP16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 SLC41A1Q8IVJ1 513 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 FSTL5Q8N475 847 aaPredicted RBP16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 SPATA22Q8NHS9 363 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 THAP11Q96EK4 314 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 TSNARE1Q96NA8 513 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 ANKRD60Q9BZ19 345 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 TKTL2Q9H0I9 626 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 SUCOQ9UBS9 1254 aaKnown RBP16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 MID2Q9UJV3 735 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 PCDHGA7Q9Y5G6 932 aa16.74■□□□□ 0.27
PCDHA1-201ENST00000378133 A0A087WXM4 84 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 KCNU1A8MYU2 1149 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 E7ENX8 843 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 SLCO1B7G3V0H7 640 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 PSMD12O00232 456 aaPredicted RBP16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 GABRDO14764 452 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 CABYRO75952 493 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 LRIG2O94898 1065 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 APOA4P06727 396 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 SLC35E2BP0CK96 405 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 HMOX2P30519 316 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 PSMD7P51665 324 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 CTBP1Q13363 440 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 GRAMD4Q6IC98 578 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 ZMIZ2Q8NF64 920 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 LPGAT1Q92604 370 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 RHOJQ9H4E5 214 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 MRPL40Q9NQ50 206 aaKnown RBP16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 INIPQ9NRY2 104 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 PDHXO00330 501 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 PTGESO14684 152 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 TREHO43280 583 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 DDHD2O94830 711 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 CKMT2P17540 419 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 PCBP1Q15365 356 aaKnown RBP eCLIP16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 PRAMEF19Q5SWL8 479 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 CYP2R1Q6VVX0 501 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 DENND6AQ8IWF6 608 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 SLCO4A1Q96BD0 722 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 PCED1BQ96HM7 432 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 OMDQ99983 421 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 BRD8Q9H0E9 1235 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 HIPK3Q9H422 1215 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 IPO11Q9UI26 975 aaKnown RBP16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 CDC14AQ9UNH5 594 aa16.73■□□□□ 0.27
PCDHA1-201ENST00000378133 MT-CYBP00156 380 aaPredicted RBP16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 CSRP3P50461 194 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 CTBSQ01459 385 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 RELAQ04206 551 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 NSUN2Q08J23 767 aaKnown RBP eCLIP16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 NHSL2Q5HYW2 709 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 NAPEPLDQ6IQ20 393 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 GK5Q6ZS86 529 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 ZNF467Q7Z7K2 595 aaPredicted RBP16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 CENPLQ8N0S6 344 aaPredicted RBP16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 LSMEM2Q8N112 164 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 TINF2Q9BSI4 451 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 FTHL17Q9BXU8 183 aa16.72■□□□□ 0.27
PCDHA1-201ENST00000378133 ABHD16BQ9H3Z7 469 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms