RNA–Protein interactions for RNA: ENST00000378043.8

BEST1-201, Transcript of bestrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BEST1, Length 2,740 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-201ENST00000378043 RSPH1Q8WYR4 309 aa11.02□□□□□ -0.65
BEST1-201ENST00000378043 NCSTNQ92542 709 aa11.02□□□□□ -0.65
BEST1-201ENST00000378043 UBXN10Q96LJ8 280 aa11.02□□□□□ -0.65
BEST1-201ENST00000378043 SYT17Q9BSW7 474 aa11.02□□□□□ -0.65
BEST1-201ENST00000378043 COPS7BQ9H9Q2 264 aaPredicted RBP11.02□□□□□ -0.65
BEST1-201ENST00000378043 ARNT2Q9HBZ2 717 aa11.02□□□□□ -0.65
BEST1-201ENST00000378043 ATP13A1Q9HD20 1204 aa11.02□□□□□ -0.65
BEST1-201ENST00000378043 IPO11Q9UI26 975 aaKnown RBP11.02□□□□□ -0.65
BEST1-201ENST00000378043 LAMA2P24043 3122 aaKnown RBP11.02□□□□□ -0.65
BEST1-201ENST00000378043 C15orf38-AP3S2A0A0A6YYH1 394 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 A8MT66 165 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 PABPC4LP0CB38 370 aaKnown RBP11.01□□□□□ -0.65
BEST1-201ENST00000378043 SMIM18P0DKX4 95 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 PLK1P53350 603 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 PFKPQ01813 784 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 MGAT3Q09327 533 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 PPP1R3AQ16821 1122 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 RASIP1Q5U651 963 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 PIK3R6Q5UE93 754 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 OVOS1Q6IE37 1185 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 CYHR1Q6ZMK1 362 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 ARPINQ7Z6K5 226 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 METTL23Q86XA0 190 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 RNF135Q8IUD6 432 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 MFN1Q8IWA4 741 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 MARVELD2Q8N4S9 558 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 TMA16Q96EY4 203 aaKnown RBP11.01□□□□□ -0.65
BEST1-201ENST00000378043 PKP2Q99959 881 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 SPON1Q9HCB6 807 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 GTSE1Q9NYZ3 720 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 FIS1Q9Y3D6 152 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 PCDHGA7Q9Y5G6 932 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 TRPC5OSA6NMA1 111 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 ZNF623O75123 536 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 IPO13O94829 963 aaKnown RBP11.01□□□□□ -0.65
BEST1-201ENST00000378043 PAMP19021 973 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 HDCP19113 662 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 TCN1P20061 433 aaPredicted RBP11.01□□□□□ -0.65
BEST1-201ENST00000378043 CD52P31358 61 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 HTR7P34969 479 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 LEPRP48357 1165 aaKnown RBP11.01□□□□□ -0.65
BEST1-201ENST00000378043 KCNC1P48547 511 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 MLLT6P55198 1093 aaPredicted RBP11.01□□□□□ -0.65
BEST1-201ENST00000378043 MAXP61244 160 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 SATB1Q01826 763 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 GK3PQ14409 553 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 TIGD7Q6NT04 549 aaPredicted RBP11.01□□□□□ -0.65
BEST1-201ENST00000378043 ZFP1Q6P2D0 407 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 TMEM207Q6UWW9 146 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 KIAA0408Q6ZU52 694 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 TRPV1Q8NER1 839 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 TRIM62Q9BVG3 475 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 PRKD2Q9BZL6 878 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 PADI3Q9ULW8 664 aa11.01□□□□□ -0.65
BEST1-201ENST00000378043 J3KR12 359 aa11□□□□□ -0.65
BEST1-201ENST00000378043 CCL22O00626 93 aa11□□□□□ -0.65
BEST1-201ENST00000378043 FBP2O00757 339 aa11□□□□□ -0.65
BEST1-201ENST00000378043 UBFD1O14562 309 aaKnown RBP11□□□□□ -0.65
BEST1-201ENST00000378043 CRTAMO95727 393 aa11□□□□□ -0.65
BEST1-201ENST00000378043 MMP2P08253 660 aa11□□□□□ -0.65
BEST1-201ENST00000378043 OR4Q2P0C623 313 aa11□□□□□ -0.65
BEST1-201ENST00000378043 CCDC166P0CW27 439 aa11□□□□□ -0.65
BEST1-201ENST00000378043 HAPLN1P10915 354 aaPredicted RBP11□□□□□ -0.65
BEST1-201ENST00000378043 SLC10A7Q0GE19 358 aa11□□□□□ -0.65
BEST1-201ENST00000378043 SLC14A2Q15849 920 aa11□□□□□ -0.65
BEST1-201ENST00000378043 C11orf91Q3C1V1 193 aa11□□□□□ -0.65
BEST1-201ENST00000378043 GNASQ5JWF2 1037 aa11□□□□□ -0.65
BEST1-201ENST00000378043 ISLR2Q6UXK2 745 aa11□□□□□ -0.65
BEST1-201ENST00000378043 LDB1Q86U70 411 aaPredicted RBP11□□□□□ -0.65
BEST1-201ENST00000378043 SERINC5Q86VE9 423 aa11□□□□□ -0.65
BEST1-201ENST00000378043 TMEM126BQ8IUX1 230 aa11□□□□□ -0.65
BEST1-201ENST00000378043 ZNF683Q8IZ20 524 aa11□□□□□ -0.65
BEST1-201ENST00000378043 PCDH20Q8N6Y1 951 aaKnown RBP11□□□□□ -0.65
BEST1-201ENST00000378043 TMEM102Q8N9M5 508 aaPredicted RBP11□□□□□ -0.65
BEST1-201ENST00000378043 IMP4Q96G21 291 aaKnown RBP11□□□□□ -0.65
BEST1-201ENST00000378043 SH3GL3Q99963 347 aa11□□□□□ -0.65
BEST1-201ENST00000378043 CENPKQ9BS16 269 aa11□□□□□ -0.65
BEST1-201ENST00000378043 SLC25A51Q9H1U9 297 aa11□□□□□ -0.65
BEST1-201ENST00000378043 MEAF6Q9HAF1 191 aa11□□□□□ -0.65
BEST1-201ENST00000378043 A0A1W2PQH9 124 aa11□□□□□ -0.65
BEST1-201ENST00000378043 TTC24A2A3L6 582 aaPredicted RBP11□□□□□ -0.65
BEST1-201ENST00000378043 IQCA1LA6NCM1 817 aa11□□□□□ -0.65
BEST1-201ENST00000378043 RNASEH2AO75792 299 aaKnown RBP11□□□□□ -0.65
BEST1-201ENST00000378043 WISP3O95389 354 aaPredicted RBP11□□□□□ -0.65
BEST1-201ENST00000378043 PMLP29590 882 aa11□□□□□ -0.65
BEST1-201ENST00000378043 GRIK1P39086 918 aa11□□□□□ -0.65
BEST1-201ENST00000378043 ARSDP51689 593 aa11□□□□□ -0.65
BEST1-201ENST00000378043 SLC12A2P55011 1212 aa11□□□□□ -0.65
BEST1-201ENST00000378043 LRP8Q14114 963 aa11□□□□□ -0.65
BEST1-201ENST00000378043 FAM83EQ2M2I3 478 aa11□□□□□ -0.65
BEST1-201ENST00000378043 RARS2Q5T160 578 aaKnown RBP11□□□□□ -0.65
BEST1-201ENST00000378043 SATL1Q86VE3 508 aa11□□□□□ -0.65
BEST1-201ENST00000378043 SNX31Q8N9S9 440 aa11□□□□□ -0.65
BEST1-201ENST00000378043 PHF21BQ96EK2 531 aa11□□□□□ -0.65
BEST1-201ENST00000378043 LRGUKQ96M69 825 aa11□□□□□ -0.65
BEST1-201ENST00000378043 KLHL5Q96PQ7 755 aa11□□□□□ -0.65
BEST1-201ENST00000378043 TBC1D13Q9NVG8 400 aa11□□□□□ -0.65
BEST1-201ENST00000378043 HTTP42858 3142 aa11□□□□□ -0.65
BEST1-201ENST00000378043 HEATR9A2RTY3 570 aa11□□□□□ -0.65
BEST1-201ENST00000378043 E7ENX8 843 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms