RNA–Protein interactions for RNA: ENST00000377199.3

TRIM27-202, Transcript of tripartite motif containing 27, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM27, Length 2,967 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM27-202ENST00000377199 RSPH1Q8WYR4 309 aa16.37■□□□□ 0.21
TRIM27-202ENST00000377199 PSMG2Q969U7 264 aa16.37■□□□□ 0.21
TRIM27-202ENST00000377199 PKP2Q99959 881 aa16.37■□□□□ 0.21
TRIM27-202ENST00000377199 NELFEP18615 380 aaKnown RBP16.37■□□□□ 0.21
TRIM27-202ENST00000377199 ARSDP51689 593 aa16.37■□□□□ 0.21
TRIM27-202ENST00000377199 PRAMEP78395 509 aa16.37■□□□□ 0.21
TRIM27-202ENST00000377199 SULT2A1Q06520 285 aa16.37■□□□□ 0.21
TRIM27-202ENST00000377199 CNPY1Q3B7I2 92 aa16.37■□□□□ 0.21
TRIM27-202ENST00000377199 LIN52Q52LA3 116 aa16.37■□□□□ 0.21
TRIM27-202ENST00000377199 ALFQ53S48 1182 aa16.37■□□□□ 0.21
TRIM27-202ENST00000377199 FAM171BQ6P995 826 aa16.37■□□□□ 0.21
TRIM27-202ENST00000377199 THEM5Q8N1Q8 247 aa16.37■□□□□ 0.21
TRIM27-202ENST00000377199 HDAC10Q969S8 669 aa16.37■□□□□ 0.21
TRIM27-202ENST00000377199 ATP6V1E2Q96A05 226 aa16.37■□□□□ 0.21
TRIM27-202ENST00000377199 TSPAN18Q96SJ8 248 aa16.37■□□□□ 0.21
TRIM27-202ENST00000377199 MRPL57Q9BQC6 102 aaKnown RBP16.37■□□□□ 0.21
TRIM27-202ENST00000377199 CLIC5Q9NZA1 410 aa16.37■□□□□ 0.21
TRIM27-202ENST00000377199 GIT1Q9Y2X7 761 aa16.37■□□□□ 0.21
TRIM27-202ENST00000377199 PTGDR2Q9Y5Y4 395 aa16.37■□□□□ 0.21
TRIM27-202ENST00000377199 A8MT66 165 aa16.36■□□□□ 0.21
TRIM27-202ENST00000377199 PSMD3O43242 534 aa16.36■□□□□ 0.21
TRIM27-202ENST00000377199 HUNKP57058 714 aa16.36■□□□□ 0.21
TRIM27-202ENST00000377199 YWHAHQ04917 246 aaPredicted RBP16.36■□□□□ 0.21
TRIM27-202ENST00000377199 RARS2Q5T160 578 aaKnown RBP16.36■□□□□ 0.21
TRIM27-202ENST00000377199 PIK3R6Q5UE93 754 aa16.36■□□□□ 0.21
TRIM27-202ENST00000377199 C2CD4AQ8NCU7 369 aaPredicted RBP16.36■□□□□ 0.21
TRIM27-202ENST00000377199 CEP70Q8NHQ1 597 aa16.36■□□□□ 0.21
TRIM27-202ENST00000377199 BLOC1S5Q8TDH9 187 aa16.36■□□□□ 0.21
TRIM27-202ENST00000377199 SLC45A3Q96JT2 553 aa16.36■□□□□ 0.21
TRIM27-202ENST00000377199 B3GALT6Q96L58 329 aa16.36■□□□□ 0.21
TRIM27-202ENST00000377199 MRPL1Q9BYD6 325 aaKnown RBP16.36■□□□□ 0.21
TRIM27-202ENST00000377199 SENP6Q9GZR1 1112 aaPredicted RBP16.36■□□□□ 0.21
TRIM27-202ENST00000377199 SP110Q9HB58 689 aa16.36■□□□□ 0.21
TRIM27-202ENST00000377199 GMPR2Q9P2T1 348 aaKnown RBP16.36■□□□□ 0.21
TRIM27-202ENST00000377199 VTI1BQ9UEU0 232 aa16.36■□□□□ 0.21
TRIM27-202ENST00000377199 TCAF2A6NFQ2 919 aa16.36■□□□□ 0.21
TRIM27-202ENST00000377199 ATP5F1P24539 256 aaPredicted RBP16.36■□□□□ 0.21
TRIM27-202ENST00000377199 GPR162Q16538 588 aa16.36■□□□□ 0.21
TRIM27-202ENST00000377199 RANBP10Q6VN20 620 aa16.36■□□□□ 0.21
TRIM27-202ENST00000377199 CUZD1Q86UP6 607 aa16.36■□□□□ 0.21
TRIM27-202ENST00000377199 PGAM4Q8N0Y7 254 aa16.36■□□□□ 0.21
TRIM27-202ENST00000377199 TTC9BQ8N6N2 239 aa16.36■□□□□ 0.21
TRIM27-202ENST00000377199 IRGQQ8WZA9 623 aa16.36■□□□□ 0.21
TRIM27-202ENST00000377199 NMD3Q96D46 503 aaKnown RBP16.36■□□□□ 0.21
TRIM27-202ENST00000377199 TSGA13Q96PP4 275 aa16.36■□□□□ 0.21
TRIM27-202ENST00000377199 TRAPPC9Q96Q05 1148 aa16.36■□□□□ 0.21
TRIM27-202ENST00000377199 CENPKQ9BS16 269 aa16.36■□□□□ 0.21
TRIM27-202ENST00000377199 IGSF5Q9NSI5 407 aa16.36■□□□□ 0.21
TRIM27-202ENST00000377199 MARCH4Q9P2E8 410 aaPredicted RBP16.36■□□□□ 0.21
TRIM27-202ENST00000377199 NOD1Q9Y239 953 aa16.36■□□□□ 0.21
TRIM27-202ENST00000377199 AP3B1O00203 1094 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 GPR182O15218 404 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 PEX1O43933 1283 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 RPL9P32969 192 aaKnown RBP16.35■□□□□ 0.21
TRIM27-202ENST00000377199 ADRA1AP35348 466 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 MAP3K21Q5TCX8 1036 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 RTL3Q8N8U3 475 aaKnown RBP16.35■□□□□ 0.21
TRIM27-202ENST00000377199 TRPV1Q8NER1 839 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 PDCD6IPQ8WUM4 868 aaKnown RBP16.35■□□□□ 0.21
TRIM27-202ENST00000377199 CNDP1Q96KN2 507 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 TREX1Q9NSU2 369 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 UXTQ9UBK9 157 aaPredicted RBP16.35■□□□□ 0.21
TRIM27-202ENST00000377199 PRPF19Q9UMS4 504 aaKnown RBP16.35■□□□□ 0.21
TRIM27-202ENST00000377199 E7ENX8 843 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 PPP6CO00743 305 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 AKR1A1P14550 325 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 KCNC1P48547 511 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 SERPINH1P50454 418 aaKnown RBP16.35■□□□□ 0.21
TRIM27-202ENST00000377199 HNRNPDQ14103 355 aaKnown RBP16.35■□□□□ 0.21
TRIM27-202ENST00000377199 FASTKQ14296 549 aaKnown RBP16.35■□□□□ 0.21
TRIM27-202ENST00000377199 MARC1Q5VT66 337 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 PIWIL4Q7Z3Z4 852 aaKnown RBP16.35■□□□□ 0.21
TRIM27-202ENST00000377199 LRRC14BA6NHZ5 514 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 UBDO15205 165 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 B4GALT3O60512 393 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 CHN2P52757 468 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 CDKN2DP55273 166 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 FRG1Q14331 258 aaKnown RBP16.35■□□□□ 0.21
TRIM27-202ENST00000377199 IHHQ14623 411 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 HECTD2Q5U5R9 776 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 IL23RQ5VWK5 629 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 RAP1GAP2Q684P5 730 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 KLC3Q6P597 504 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 ZNF280BQ86YH2 543 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 HAPLN3Q96S86 360 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 UBAP1Q9NZ09 502 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 ACTL7AQ9Y615 435 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 AP4B1Q9Y6B7 739 aa16.35■□□□□ 0.21
TRIM27-202ENST00000377199 SLCO1B7G3V0H7 640 aa16.34■□□□□ 0.21
TRIM27-202ENST00000377199 FGF10O15520 208 aaPredicted RBP16.34■□□□□ 0.21
TRIM27-202ENST00000377199 IPO13O94829 963 aaKnown RBP16.34■□□□□ 0.21
TRIM27-202ENST00000377199 SIX3O95343 332 aaPredicted RBP16.34■□□□□ 0.21
TRIM27-202ENST00000377199 PRSS56P0CW18 603 aa16.34■□□□□ 0.21
TRIM27-202ENST00000377199 RGS2P41220 211 aa16.34■□□□□ 0.21
TRIM27-202ENST00000377199 PSME3P61289 254 aa16.34■□□□□ 0.21
TRIM27-202ENST00000377199 USP46P62068 366 aa16.34■□□□□ 0.21
TRIM27-202ENST00000377199 TRIM32Q13049 653 aa16.34■□□□□ 0.21
TRIM27-202ENST00000377199 GALNT3Q14435 633 aa16.34■□□□□ 0.21
TRIM27-202ENST00000377199 OGFRL1Q5TC84 451 aaPredicted RBP16.34■□□□□ 0.21
TRIM27-202ENST00000377199 AGAP9Q5VTM2 703 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms