RNA–Protein interactions for RNA: ENST00000375167.1

H2AFX-201, Transcript of H2A histone family member X, humanhuman

TSL 2

Gene H2AFX, Length 1,373 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H2AFX-201ENST00000375167 PDXKO00764 312 aa17.65■□□□□ 0.42
H2AFX-201ENST00000375167 SMAD6O43541 496 aaKnown RBP17.65■□□□□ 0.42
H2AFX-201ENST00000375167 SNAP91O60641 907 aa17.65■□□□□ 0.42
H2AFX-201ENST00000375167 MAN1A1P33908 653 aa17.65■□□□□ 0.42
H2AFX-201ENST00000375167 NOP2P46087 812 aaKnown RBP17.65■□□□□ 0.42
H2AFX-201ENST00000375167 PEX5P50542 639 aa17.65■□□□□ 0.42
H2AFX-201ENST00000375167 VAMP7P51809 220 aa17.65■□□□□ 0.42
H2AFX-201ENST00000375167 PMS2P54278 862 aa17.65■□□□□ 0.42
H2AFX-201ENST00000375167 INPP5JQ15735 1006 aaPredicted RBP17.65■□□□□ 0.42
H2AFX-201ENST00000375167 MCEMP1Q8IX19 187 aa17.65■□□□□ 0.42
H2AFX-201ENST00000375167 ATL2Q8NHH9 583 aa17.65■□□□□ 0.42
H2AFX-201ENST00000375167 SMARCE1Q969G3 411 aa17.65■□□□□ 0.42
H2AFX-201ENST00000375167 FAM149B1Q96BN6 582 aa17.65■□□□□ 0.42
H2AFX-201ENST00000375167 RBM15Q96T37 977 aaKnown RBP eCLIP17.65■□□□□ 0.423e-7■■■□□ 15.9
H2AFX-201ENST00000375167 PRMT1Q99873 361 aaKnown RBP17.65■□□□□ 0.42
H2AFX-201ENST00000375167 KCTD10Q9H3F6 313 aa17.65■□□□□ 0.42
H2AFX-201ENST00000375167 RUBCNLQ9H714 662 aa17.65■□□□□ 0.42
H2AFX-201ENST00000375167 MMRN2Q9H8L6 949 aa17.65■□□□□ 0.42
H2AFX-201ENST00000375167 KLQ9UEF7 1012 aa17.65■□□□□ 0.42
H2AFX-201ENST00000375167 VPS51Q9UID3 782 aa17.65■□□□□ 0.42
H2AFX-201ENST00000375167 OAS3Q9Y6K5 1087 aaKnown RBP17.65■□□□□ 0.42
H2AFX-201ENST00000375167 B4GAT1O43505 415 aa17.64■□□□□ 0.41
H2AFX-201ENST00000375167 FYNP06241 537 aa17.64■□□□□ 0.41
H2AFX-201ENST00000375167 TRIM49P0CI25 452 aa17.64■□□□□ 0.41
H2AFX-201ENST00000375167 TRIM49CP0CI26 452 aa17.64■□□□□ 0.41
H2AFX-201ENST00000375167 VARSP26640 1264 aaKnown RBP17.64■□□□□ 0.41
H2AFX-201ENST00000375167 ALDH4A1P30038 563 aa17.64■□□□□ 0.41
H2AFX-201ENST00000375167 ABL2P42684 1182 aa17.64■□□□□ 0.41
H2AFX-201ENST00000375167 LIMK2P53671 638 aa17.64■□□□□ 0.41
H2AFX-201ENST00000375167 OR1D5P58170 312 aa17.64■□□□□ 0.41
H2AFX-201ENST00000375167 SRP54P61011 504 aaKnown RBP17.64■□□□□ 0.41
H2AFX-201ENST00000375167 NADK2Q4G0N4 442 aa17.64■□□□□ 0.41
H2AFX-201ENST00000375167 ENPP7Q6UWV6 458 aa17.64■□□□□ 0.41
H2AFX-201ENST00000375167 TAF8Q7Z7C8 310 aa17.64■□□□□ 0.41
H2AFX-201ENST00000375167 GUF1Q8N442 669 aaKnown RBP17.64■□□□□ 0.41
H2AFX-201ENST00000375167 TMEM174Q8WUU8 243 aa17.64■□□□□ 0.41
H2AFX-201ENST00000375167 HEPHQ9BQS7 1158 aa17.64■□□□□ 0.41
H2AFX-201ENST00000375167 GTPBP4Q9BZE4 634 aaKnown RBP17.64■□□□□ 0.41
H2AFX-201ENST00000375167 O00370 1275 aa17.63■□□□□ 0.41
H2AFX-201ENST00000375167 GABBR2O75899 941 aa17.63■□□□□ 0.41
H2AFX-201ENST00000375167 ENDOD1O94919 500 aa17.63■□□□□ 0.41
H2AFX-201ENST00000375167 NR3C1P04150 777 aa17.63■□□□□ 0.41
H2AFX-201ENST00000375167 PGDP52209 483 aa17.63■□□□□ 0.41
H2AFX-201ENST00000375167 PRR30Q53SZ7 412 aaPredicted RBP17.63■□□□□ 0.41
H2AFX-201ENST00000375167 FBXL22Q6P050 247 aa17.63■□□□□ 0.41
H2AFX-201ENST00000375167 PMF1Q6P1K2 205 aa17.63■□□□□ 0.41
H2AFX-201ENST00000375167 RTP4Q96DX8 246 aa17.63■□□□□ 0.41
H2AFX-201ENST00000375167 TRIM62Q9BVG3 475 aa17.63■□□□□ 0.41
H2AFX-201ENST00000375167 MIS12Q9H081 205 aa17.63■□□□□ 0.41
H2AFX-201ENST00000375167 DPEP2Q9H4A9 486 aa17.63■□□□□ 0.41
H2AFX-201ENST00000375167 MBNL1Q9NR56 388 aaKnown RBP17.63■□□□□ 0.41
H2AFX-201ENST00000375167 MAPK8IP1Q9UQF2 711 aa17.63■□□□□ 0.41
H2AFX-201ENST00000375167 MRPS18BQ9Y676 258 aaKnown RBP17.63■□□□□ 0.41
H2AFX-201ENST00000375167 CSMD2Q7Z408 3487 aa17.62■□□□□ 0.41
H2AFX-201ENST00000375167 SPG11Q96JI7 2443 aa17.62■□□□□ 0.41
H2AFX-201ENST00000375167 RHPN2P1A8MT19 583 aa17.62■□□□□ 0.41
H2AFX-201ENST00000375167 SART1O43290 800 aaKnown RBP17.62■□□□□ 0.41
H2AFX-201ENST00000375167 CLDN11O75508 207 aa17.62■□□□□ 0.41
H2AFX-201ENST00000375167 TM7SF2O76062 418 aa17.62■□□□□ 0.41
H2AFX-201ENST00000375167 TNFP01375 233 aa17.62■□□□□ 0.41
H2AFX-201ENST00000375167 PPP3CAQ08209 521 aa17.62■□□□□ 0.41
H2AFX-201ENST00000375167 NFATC4Q14934 902 aa17.62■□□□□ 0.41
H2AFX-201ENST00000375167 ZNF658Q5TYW1 1059 aaPredicted RBP17.62■□□□□ 0.41
H2AFX-201ENST00000375167 SPECC1LQ69YQ0 1117 aa17.62■□□□□ 0.41
H2AFX-201ENST00000375167 LINGO4Q6UY18 593 aa17.62■□□□□ 0.41
H2AFX-201ENST00000375167 SFTPA2Q8IWL1 248 aa17.62■□□□□ 0.41
H2AFX-201ENST00000375167 OR4D9Q8NGE8 314 aa17.62■□□□□ 0.41
H2AFX-201ENST00000375167 KIAA1524Q8TCG1 905 aa17.62■□□□□ 0.41
H2AFX-201ENST00000375167 PSMB7Q99436 277 aa17.62■□□□□ 0.41
H2AFX-201ENST00000375167 SPRY4Q9C004 299 aa17.62■□□□□ 0.41
H2AFX-201ENST00000375167 OCIAD1Q9NX40 245 aa17.62■□□□□ 0.41
H2AFX-201ENST00000375167 TBC1D30Q9Y2I9 924 aa17.62■□□□□ 0.41
H2AFX-201ENST00000375167 ARHGEF17Q96PE2 2063 aaPredicted RBP17.61■□□□□ 0.41
H2AFX-201ENST00000375167 INPP4BO15327 924 aa17.61■□□□□ 0.41
H2AFX-201ENST00000375167 CALUO43852 315 aaPredicted RBP17.61■□□□□ 0.41
H2AFX-201ENST00000375167 VDRP11473 427 aa17.61■□□□□ 0.41
H2AFX-201ENST00000375167 PTMSP20962 102 aa17.61■□□□□ 0.41
H2AFX-201ENST00000375167 STAT5AP42229 794 aa17.61■□□□□ 0.41
H2AFX-201ENST00000375167 IRF4Q15306 451 aa17.61■□□□□ 0.41
H2AFX-201ENST00000375167 DCAF4L2Q8NA75 395 aa17.61■□□□□ 0.41
H2AFX-201ENST00000375167 TP53I13Q8NBR0 393 aaPredicted RBP17.61■□□□□ 0.41
H2AFX-201ENST00000375167 SLC35F5Q8WV83 523 aa17.61■□□□□ 0.41
H2AFX-201ENST00000375167 PDXPQ96GD0 296 aa17.61■□□□□ 0.41
H2AFX-201ENST00000375167 ZDHHC6Q9H6R6 413 aa17.61■□□□□ 0.41
H2AFX-201ENST00000375167 TMEM8AQ9HCN3 771 aa17.61■□□□□ 0.41
H2AFX-201ENST00000375167 ITGB1BP2Q9UKP3 347 aa17.61■□□□□ 0.41
H2AFX-201ENST00000375167 TRAF3IP3Q9Y228 551 aa17.61■□□□□ 0.41
H2AFX-201ENST00000375167 C16orf96A6NNT2 1141 aa17.6■□□□□ 0.41
H2AFX-201ENST00000375167 STK17BO94768 372 aa17.6■□□□□ 0.41
H2AFX-201ENST00000375167 RHOCP08134 193 aa17.6■□□□□ 0.41
H2AFX-201ENST00000375167 THRAP10827 490 aa17.6■□□□□ 0.41
H2AFX-201ENST00000375167 SLC2A3P11169 496 aa17.6■□□□□ 0.41
H2AFX-201ENST00000375167 DNA2P51530 1060 aa17.6■□□□□ 0.41
H2AFX-201ENST00000375167 IRAK1P51617 712 aa17.6■□□□□ 0.41
H2AFX-201ENST00000375167 CCNHP51946 323 aaPredicted RBP17.6■□□□□ 0.41
H2AFX-201ENST00000375167 ERV3-1Q14264 604 aa17.6■□□□□ 0.41
H2AFX-201ENST00000375167 COBLL1Q53SF7 1204 aa17.6■□□□□ 0.41
H2AFX-201ENST00000375167 ZRANB3Q5FWF4 1079 aa17.6■□□□□ 0.41
H2AFX-201ENST00000375167 SYPL2Q5VXT5 272 aa17.6■□□□□ 0.41
H2AFX-201ENST00000375167 CEACAM20Q6UY09 585 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms