RNA–Protein interactions for RNA: ENST00000374673.3

HSPG2-201, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 3

Gene HSPG2, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-201ENST00000374673 CEP68Q76N32 757 aa15.14■□□□□ 0.01
HSPG2-201ENST00000374673 ZSWIM9Q86XI8 627 aa15.14■□□□□ 0.01
HSPG2-201ENST00000374673 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.14■□□□□ 0.01
HSPG2-201ENST00000374673 OR2T34Q8NGX1 318 aa15.14■□□□□ 0.01
HSPG2-201ENST00000374673 OR14C36Q8NHC7 312 aa15.14■□□□□ 0.01
HSPG2-201ENST00000374673 CCDC110Q8TBZ0 833 aa15.14■□□□□ 0.01
HSPG2-201ENST00000374673 ATOH1Q92858 354 aaPredicted RBP15.14■□□□□ 0.01
HSPG2-201ENST00000374673 CAPZA3Q96KX2 299 aa15.14■□□□□ 0.01
HSPG2-201ENST00000374673 RBM15Q96T37 977 aaKnown RBP eCLIP15.14■□□□□ 0.01
HSPG2-201ENST00000374673 GPR174Q9BXC1 333 aa15.14■□□□□ 0.01
HSPG2-201ENST00000374673 AP1M1Q9BXS5 423 aa15.14■□□□□ 0.01
HSPG2-201ENST00000374673 PCED1AQ9H1Q7 454 aa15.14■□□□□ 0.01
HSPG2-201ENST00000374673 EPC1Q9H2F5 836 aa15.14■□□□□ 0.01
HSPG2-201ENST00000374673 VPS45Q9NRW7 570 aa15.14■□□□□ 0.01
HSPG2-201ENST00000374673 LRRC72A6NJI9 287 aa15.13■□□□□ 0.01
HSPG2-201ENST00000374673 UPK3BL1B0FP48 263 aa15.13■□□□□ 0.01
HSPG2-201ENST00000374673 UPK3BL2E5RIL1 263 aa15.13■□□□□ 0.01
HSPG2-201ENST00000374673 AREL1O15033 823 aa15.13■□□□□ 0.01
HSPG2-201ENST00000374673 MAP3K13O43283 966 aa15.13■□□□□ 0.01
HSPG2-201ENST00000374673 PHF2O75151 1096 aa15.13■□□□□ 0.01
HSPG2-201ENST00000374673 MT-CYBP00156 380 aaPredicted RBP15.13■□□□□ 0.01
HSPG2-201ENST00000374673 CPP00450 1065 aa15.13■□□□□ 0.01
HSPG2-201ENST00000374673 NBL1P41271 181 aa15.13■□□□□ 0.01
HSPG2-201ENST00000374673 PAFAH1B1P43034 410 aa15.13■□□□□ 0.01
HSPG2-201ENST00000374673 RPL6Q02878 288 aaKnown RBP15.13■□□□□ 0.01
HSPG2-201ENST00000374673 SIM2Q14190 667 aaPredicted RBP15.13■□□□□ 0.01
HSPG2-201ENST00000374673 TTC7BQ86TV6 843 aa15.13■□□□□ 0.01
HSPG2-201ENST00000374673 CADM4Q8NFZ8 388 aa15.13■□□□□ 0.01
HSPG2-201ENST00000374673 SPATA22Q8NHS9 363 aa15.13■□□□□ 0.01
HSPG2-201ENST00000374673 PDCD6IPQ8WUM4 868 aaKnown RBP15.13■□□□□ 0.01
HSPG2-201ENST00000374673 MAGOHBQ96A72 148 aaKnown RBP15.13■□□□□ 0.01
HSPG2-201ENST00000374673 PPP1R2P1Q96PQ5 205 aa15.13■□□□□ 0.01
HSPG2-201ENST00000374673 GORASP1Q9BQQ3 440 aa15.13■□□□□ 0.01
HSPG2-201ENST00000374673 DUSP15Q9H1R2 295 aaPredicted RBP15.13■□□□□ 0.01
HSPG2-201ENST00000374673 PREBQ9HCU5 417 aa15.13■□□□□ 0.01
HSPG2-201ENST00000374673 FAM153AQ9UHL3 310 aa15.13■□□□□ 0.01
HSPG2-201ENST00000374673 PHTF1Q9UMS5 762 aa15.13■□□□□ 0.01
HSPG2-201ENST00000374673 PPIL1Q9Y3C6 166 aa15.13■□□□□ 0.01
HSPG2-201ENST00000374673 ARIH1Q9Y4X5 557 aaPredicted RBP15.13■□□□□ 0.01
HSPG2-201ENST00000374673 PCDHB9Q9Y5E1 797 aa15.13■□□□□ 0.01
HSPG2-201ENST00000374673 FADS3Q9Y5Q0 445 aa15.13■□□□□ 0.01
HSPG2-201ENST00000374673 ABCA7Q8IZY2 2146 aa15.13■□□□□ 0.01
HSPG2-201ENST00000374673 LRRK1Q38SD2 2015 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 SPINT1O43278 529 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 ANXA9O76027 345 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 RHOBTB1O94844 696 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 PRLP01236 227 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 PDHA1P08559 390 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 XPAP23025 273 aaPredicted RBP15.12■□□□□ 0.01
HSPG2-201ENST00000374673 PSMB4P28070 264 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 COILP38432 576 aaPredicted RBP15.12■□□□□ 0.01
HSPG2-201ENST00000374673 KCNJ1P48048 391 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 FNTAP49354 379 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 GEMP55040 296 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 RPL26P61254 145 aaKnown RBP15.12■□□□□ 0.01
HSPG2-201ENST00000374673 LMNB2Q03252 620 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 ELP6Q0PNE2 266 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 MPP3Q13368 585 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 ELF2Q15723 593 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 PARP6Q2NL67 630 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 NEK5Q6P3R8 708 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 TTC27Q6P3X3 843 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 KDELC1Q6UW63 502 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 ARHGEF18Q6ZSZ5 1173 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 LPCAT2Q7L5N7 544 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 KLHDC8BQ8IXV7 354 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 PAF1Q8N7H5 531 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 ATL2Q8NHH9 583 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 PIH1D2Q8WWB5 315 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 OXNAD1Q96HP4 312 aaPredicted RBP15.12■□□□□ 0.01
HSPG2-201ENST00000374673 TRIB3Q96RU7 358 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 SEMA4AQ9H3S1 761 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 C6orf106Q9H6K1 298 aaPredicted RBP15.12■□□□□ 0.01
HSPG2-201ENST00000374673 PCDH9Q9HC56 1237 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 TPX2Q9ULW0 747 aaKnown RBP15.12■□□□□ 0.01
HSPG2-201ENST00000374673 RPL26L1Q9UNX3 145 aaKnown RBP15.12■□□□□ 0.01
HSPG2-201ENST00000374673 CHKBQ9Y259 395 aa15.12■□□□□ 0.01
HSPG2-201ENST00000374673 TBC1D3DA0A087WVF3 549 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 TBC1D3IA0A087WXS9 549 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 TBC1D3EA0A087X179 549 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 TBC1D3KA0A087X1G2 549 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 TBC1D3FA6NER0 549 aaPredicted RBP15.11■□□□□ 0.01
HSPG2-201ENST00000374673 METTL12A8MUP2 240 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 TBC1D3LB9A6J9 549 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 PDE2AO00408 941 aaPredicted RBP15.11■□□□□ 0.01
HSPG2-201ENST00000374673 RIOK3O14730 519 aaKnown RBP15.11■□□□□ 0.01
HSPG2-201ENST00000374673 TSPAN6O43657 245 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 IFNB1P01574 187 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 TBC1D3HP0C7X1 549 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 NFKBIAP25963 317 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 ACTN2P35609 894 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 GRIA4P48058 902 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 CDK18Q07002 472 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 PRPSAP1Q14558 356 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 TMEM52BQ4KMG9 183 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 LRRC73Q5JTD7 316 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 KIAA0895LQ68EN5 471 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 TBC1D3GQ6DHY5 549 aa15.11■□□□□ 0.01
HSPG2-201ENST00000374673 TBC1D3CQ6IPX1 549 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms