RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 ICMTO60725 284 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 SRP72O76094 671 aaKnown RBP13.01□□□□□ -0.33
PRPF4-201ENST00000374198 MPOP05164 745 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 ERVK-10P10266 1014 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 NAMPTP43490 491 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 SLC7A2P52569 658 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 STX1BP61266 288 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 POLD3Q15054 466 aaPredicted RBP13.01□□□□□ -0.33
PRPF4-201ENST00000374198 CTF1Q16619 201 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 FAM45BPQ6NSW5 357 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 NEK10Q6ZWH5 1172 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 LACC1Q8IV20 430 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 AQP12AQ8IXF9 295 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 SPARTQ8N0X7 666 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 ANKRD52Q8NB46 1076 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 GMCL1P1Q8NEA9 526 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 PIK3C3Q8NEB9 887 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 FAM45AQ8TCE6 357 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 ATXN7L3BQ96GX2 97 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 CPNE1Q99829 537 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 MTMR12Q9C0I1 747 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 ZNF408Q9H9D4 720 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 KCNH7Q9NS40 1196 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 GPSM3Q9Y4H4 160 aa13.01□□□□□ -0.33
PRPF4-201ENST00000374198 TAF4O00268 1085 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 VWA5AO00534 786 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 TNPO2O14787 897 aaKnown RBP13□□□□□ -0.33
PRPF4-201ENST00000374198 MRASO14807 208 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 MYCLP1P12525 358 aaPredicted RBP13□□□□□ -0.33
PRPF4-201ENST00000374198 PGAM1P18669 254 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 PSMA4P25789 261 aaKnown RBP13□□□□□ -0.33
PRPF4-201ENST00000374198 AXLP30530 894 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 CASP3P42574 277 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 NAGLUP54802 743 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 SLC13A2Q13183 592 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 AGKQ53H12 422 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 PITRM1Q5JRX3 1037 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 C8orf82Q6P1X6 216 aaPredicted RBP13□□□□□ -0.33
PRPF4-201ENST00000374198 ZYG11AQ6WRX3 759 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 CCDC81Q6ZN84 652 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 CYP4V2Q6ZWL3 525 aaPredicted RBP13□□□□□ -0.33
PRPF4-201ENST00000374198 SPPL2CQ8IUH8 684 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 LSMEM2Q8N112 164 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 GOLM1Q8NBJ4 401 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 HDAC10Q969S8 669 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 MUS81Q96NY9 551 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 PGAP2Q9UHJ9 254 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 CYTH4Q9UIA0 394 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 MID2Q9UJV3 735 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 RABL2BQ9UNT1 228 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 TMEM88BA6NKF7 163 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 H0YAE9 185 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 SDHDO14521 159 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 TEX28O15482 410 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 KCNA2P16389 499 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 SOX10P56693 466 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 GNG2P59768 71 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 YWHAEP62258 255 aaKnown RBP13□□□□□ -0.33
PRPF4-201ENST00000374198 FKBP1AP62942 108 aaKnown RBP13□□□□□ -0.33
PRPF4-201ENST00000374198 SEMA5AQ13591 1074 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 FASTKQ14296 549 aaKnown RBP13□□□□□ -0.33
PRPF4-201ENST00000374198 SNX17Q15036 470 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 SULF1Q8IWU6 871 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 C4orf19Q8IY42 314 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 REM2Q8IYK8 340 aaPredicted RBP13□□□□□ -0.33
PRPF4-201ENST00000374198 OR6Q1Q8NGQ2 317 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 ARNTL2Q8WYA1 636 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 SPATA17Q96L03 361 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 RBBP8Q99708 897 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 ACE2Q9BYF1 805 aaPredicted RBP13□□□□□ -0.33
PRPF4-201ENST00000374198 TRIM15Q9C019 465 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 ASNSD1Q9NWL6 643 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 CCDC167Q9P0B6 97 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 GMIPQ9P107 970 aa13□□□□□ -0.33
PRPF4-201ENST00000374198 XYLBO75191 536 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 FYNP06241 537 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 GSNP06396 782 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 MLNP12872 115 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 PRKACBP22694 351 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 IL4RP24394 825 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 CD40LGP29965 261 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 SPRP35270 261 aaPredicted RBP12.99□□□□□ -0.33
PRPF4-201ENST00000374198 SESN2P58004 480 aaPredicted RBP12.99□□□□□ -0.33
PRPF4-201ENST00000374198 XYLT1Q86Y38 959 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 ERO1BQ86YB8 467 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 CDKL3Q8IVW4 592 aaPredicted RBP12.99□□□□□ -0.33
PRPF4-201ENST00000374198 SLC38A6Q8IZM9 456 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 ASCC1Q8N9N2 400 aaKnown RBP12.99□□□□□ -0.33
PRPF4-201ENST00000374198 OR5B17Q8NGF7 314 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 MYRFLQ96LU7 910 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 CAB39LQ9H9S4 337 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.99□□□□□ -0.33
PRPF4-201ENST00000374198 CISHQ9NSE2 258 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 TRPC5OSA6NMA1 111 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 KCNK2O95069 426 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 C2P06681 752 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 SNRPB2P08579 225 aaKnown RBP12.99□□□□□ -0.33
PRPF4-201ENST00000374198 CRHBPP24387 322 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 MGAT1P26572 445 aa12.99□□□□□ -0.33
PRPF4-201ENST00000374198 LRPAP1P30533 357 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms