RNA–Protein interactions for RNA: ENST00000371817.7

COL5A1-201, Transcript of collagen type V alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL5A1, Length 8,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-201ENST00000371817 RPTORQ8N122 1335 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 PNPLA4P41247 253 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 FAM13CQ8NE31 585 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 PAK6Q9NQU5 681 aaPredicted RBP15.35■□□□□ 0.05
COL5A1-201ENST00000371817 C9IYK1 514 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 SLC22A1O15245 554 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 CCNDBP1O95273 360 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 PTX3P26022 381 aaPredicted RBP15.35■□□□□ 0.05
COL5A1-201ENST00000371817 GJA9P57773 515 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 NIPAL1Q6NVV3 410 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 ATL1Q8WXF7 558 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 CD101Q93033 1021 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 ZNF639Q9UID6 485 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 KIAA1257Q9ULG3 409 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 SUV39H1O43463 412 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 RPL3P39023 403 aaKnown RBP15.35■□□□□ 0.05
COL5A1-201ENST00000371817 SSTP61278 116 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 GALNT5Q7Z7M9 940 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 DSELQ8IZU8 1212 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 DNAJC1Q96KC8 554 aaKnown RBP15.35■□□□□ 0.05
COL5A1-201ENST00000371817 PCDHA11Q9Y5I1 949 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 EML1O00423 815 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 GATBO75879 557 aaKnown RBP15.35■□□□□ 0.05
COL5A1-201ENST00000371817 NTRK1P04629 796 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 UGT2B4P06133 528 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 ABL2P42684 1182 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 MTFMTQ96DP5 389 aaKnown RBP15.35■□□□□ 0.05
COL5A1-201ENST00000371817 BLOC1S4Q9NUP1 217 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 CDH22Q9UJ99 828 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 ZSCAN5BA6NJL1 495 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 JCHAINP01591 159 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 ABHD2P08910 425 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 BCAT1P54687 386 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 C1QBPQ07021 282 aaKnown RBP15.35■□□□□ 0.05
COL5A1-201ENST00000371817 NKX1-1Q15270 411 aaPredicted RBP15.35■□□□□ 0.05
COL5A1-201ENST00000371817 SPERTQ8NA61 448 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 MGME1Q9BQP7 344 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 C17orf75Q9HAS0 396 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 MPZL2O60487 215 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 ITGB3P05106 788 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 ERP29P30040 261 aaKnown RBP15.35■□□□□ 0.05
COL5A1-201ENST00000371817 RPL4P36578 427 aaKnown RBP15.35■□□□□ 0.05
COL5A1-201ENST00000371817 TAS2R41P59536 307 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 DCDC1P59894 354 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 NFIAQ12857 509 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 PPIL2Q13356 520 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 ATXN3LQ9H3M9 355 aa15.35■□□□□ 0.05
COL5A1-201ENST00000371817 CHADO15335 359 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 EPORP19235 508 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 MAGEA8P43361 318 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 PRKG2Q13237 762 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 ALG11Q2TAA5 492 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 EFCAB3Q8N7B9 438 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 GATAD2BQ8WXI9 593 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 MSANTD3Q96H12 275 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 ZNF607Q96SK3 696 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 ADGRE2Q9UHX3 823 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 PACSIN3Q9UKS6 424 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 ITGA11Q9UKX5 1188 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 SH3D21A4FU49 640 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 F5H6K3 240 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 ARL3P36405 182 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 NAGLUP54802 743 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 KLRC3Q07444 240 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 INSCQ1MX18 579 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 ARSHQ5FYA8 562 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 SLC44A5Q8NCS7 719 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 RIT2Q99578 217 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 FNDC11Q9BVV2 318 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 CDK12Q9NYV4 1490 aaPredicted RBP15.34■□□□□ 0.05
COL5A1-201ENST00000371817 C21orf2O43822 256 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 IFNGP01579 166 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 PABPC1LQ4VXU2 614 aaKnown RBP15.34■□□□□ 0.05
COL5A1-201ENST00000371817 KLHDC10Q6PID8 442 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 SRFBP1Q8NEF9 429 aaKnown RBP15.34■□□□□ 0.05
COL5A1-201ENST00000371817 FATE1Q969F0 183 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 MRPL57Q9BQC6 102 aaKnown RBP15.34■□□□□ 0.05
COL5A1-201ENST00000371817 BBIP1A8MTZ0 92 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 CD40LGP29965 261 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 AUHQ13825 339 aaKnown RBP15.34■□□□□ 0.05
COL5A1-201ENST00000371817 AHSA2Q719I0 299 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 MAGI2Q86UL8 1455 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 RRN3P2A6NIE6 340 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 HDAC3O15379 428 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 NR4A1P22736 598 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 CRKLP46109 303 aaKnown RBP15.34■□□□□ 0.05
COL5A1-201ENST00000371817 EMC2Q15006 297 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 UBE2J2Q8N2K1 259 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 STOML3Q8TAV4 291 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 ANKRA2Q9H9E1 313 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 DHX15O43143 795 aaKnown RBP15.34■□□□□ 0.05
COL5A1-201ENST00000371817 RPLP0P05388 317 aaKnown RBP15.34■□□□□ 0.05
COL5A1-201ENST00000371817 PEPDP12955 493 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 PRKACAP17612 351 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 TRIM40Q6P9F5 258 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 OR5J2Q8NH18 312 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 HTR3CQ8WXA8 447 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 XPNPEP3Q9NQH7 507 aa15.34■□□□□ 0.05
COL5A1-201ENST00000371817 IFT80Q9P2H3 777 aaPredicted RBP15.34■□□□□ 0.05
COL5A1-201ENST00000371817 DNPEPQ9ULA0 475 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms