RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 UBTFL6P0CB48 400 aaPredicted RBP11.84□□□□□ -0.51
PDE6C-201ENST00000371447 BMP1P13497 986 aa11.84□□□□□ -0.51
PDE6C-201ENST00000371447 CYP2C18P33260 490 aa11.84□□□□□ -0.51
PDE6C-201ENST00000371447 ARCN1P48444 511 aaKnown RBP11.84□□□□□ -0.51
PDE6C-201ENST00000371447 RPL14P50914 215 aaKnown RBP11.84□□□□□ -0.51
PDE6C-201ENST00000371447 NSUN2Q08J23 767 aaKnown RBP eCLIP11.84□□□□□ -0.51
PDE6C-201ENST00000371447 MAP3K21Q5TCX8 1036 aa11.84□□□□□ -0.51
PDE6C-201ENST00000371447 LPCAT4Q643R3 524 aa11.84□□□□□ -0.51
PDE6C-201ENST00000371447 LZTR1Q8N653 840 aa11.84□□□□□ -0.51
PDE6C-201ENST00000371447 PPFIBP2Q8ND30 876 aa11.84□□□□□ -0.51
PDE6C-201ENST00000371447 NPAS2Q99743 824 aa11.84□□□□□ -0.51
PDE6C-201ENST00000371447 TRIM62Q9BVG3 475 aa11.84□□□□□ -0.51
PDE6C-201ENST00000371447 HMX1Q9NP08 348 aaPredicted RBP11.84□□□□□ -0.51
PDE6C-201ENST00000371447 SCML2Q9UQR0 700 aa11.84□□□□□ -0.51
PDE6C-201ENST00000371447 PTGDR2Q9Y5Y4 395 aa11.84□□□□□ -0.51
PDE6C-201ENST00000371447 ZFP37Q9Y6Q3 630 aaPredicted RBP11.84□□□□□ -0.51
PDE6C-201ENST00000371447 ARHGEF37A1IGU5 675 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 OAZ2O95190 189 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 KLHL2O95198 593 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 PEX19P40855 299 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 DSC1Q08554 894 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 KLF10Q13118 480 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 PLD1Q13393 1074 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 PPP1R3AQ16821 1122 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 TSNAXIP1Q2TAA8 658 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 HABP4Q5JVS0 413 aaKnown RBP11.83□□□□□ -0.52
PDE6C-201ENST00000371447 LIPMQ5VYY2 423 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 LRRC74BQ6ZQY2 392 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 PCDH20Q8N6Y1 951 aaKnown RBP11.83□□□□□ -0.52
PDE6C-201ENST00000371447 DDX51Q8N8A6 666 aaKnown RBP eCLIP11.83□□□□□ -0.52
PDE6C-201ENST00000371447 DEFB118Q96PH6 123 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 TNFRSF12AQ9NP84 129 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 MTPAPQ9NVV4 582 aaKnown RBP eCLIP11.83□□□□□ -0.52
PDE6C-201ENST00000371447 F5H5T6 163 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 FAM163BP0C2L3 166 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 COX4I1P13073 169 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 GNAZP19086 355 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 CALRP27797 417 aaKnown RBP11.83□□□□□ -0.52
PDE6C-201ENST00000371447 KCNC1P48547 511 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 ALDH7A1P49419 539 aaKnown RBP11.83□□□□□ -0.52
PDE6C-201ENST00000371447 CDKN1CP49918 316 aaPredicted RBP11.83□□□□□ -0.52
PDE6C-201ENST00000371447 CSE1LP55060 971 aaKnown RBP11.83□□□□□ -0.52
PDE6C-201ENST00000371447 CDKN2DP55273 166 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 UGP2Q16851 508 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 INSCQ1MX18 579 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 RABGAP1LQ5R372 815 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 NADSYN1Q6IA69 706 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 RCN3Q96D15 328 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 BTN2A3PQ96KV6 586 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 MUC3BQ9H195 1237 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 SLC25A51Q9H1U9 297 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.83□□□□□ -0.52
PDE6C-201ENST00000371447 TM7SF2O76062 418 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 EOMESO95936 686 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 ZCCHC18P0CG32 403 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 FMO4P31512 558 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 SLC6A4P31645 630 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 ABL2P42684 1182 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 RGRP47804 291 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 SGSHP51688 502 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 SLC34A1Q06495 639 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 TWF1Q12792 350 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 NAB1Q13506 487 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 LBRQ14739 615 aaKnown RBP11.83□□□□□ -0.52
PDE6C-201ENST00000371447 POTEHQ6S545 545 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 SCIMPQ6UWF3 145 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.83□□□□□ -0.52
PDE6C-201ENST00000371447 TSGA13Q96PP4 275 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 CDRT15Q96T59 188 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 TM6SF2Q9BZW4 377 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 TLE6Q9H808 572 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 CREBZFQ9NS37 354 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 NCKIPSDQ9NZQ3 722 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 CCDC167Q9P0B6 97 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 RAD54BQ9Y620 910 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 COMMD10Q9Y6G5 202 aa11.83□□□□□ -0.52
PDE6C-201ENST00000371447 HEATR9A2RTY3 570 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 IGHA2P01877 340 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 RHOQP17081 205 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 TSTD2Q5T7W7 516 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 HECTD2Q5U5R9 776 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 MANEALQ5VSG8 457 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 ACAD11Q709F0 780 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 LPCAT1Q8NF37 534 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 UBE2OQ9C0C9 1292 aaKnown RBP11.82□□□□□ -0.52
PDE6C-201ENST00000371447 ABCG8Q9H221 673 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 ADA2Q9NZK5 511 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 A0A088AWK7 358 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 ZNF195O14628 629 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 HDAC3O15379 428 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 SNAP91O60641 907 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 HNRNPCL1O60812 293 aaKnown RBP11.82□□□□□ -0.52
PDE6C-201ENST00000371447 GOT2P00505 430 aaKnown RBP11.82□□□□□ -0.52
PDE6C-201ENST00000371447 SLC2A3P11169 496 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 SELPP16109 830 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 ITGB6P18564 788 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 TACR2P21452 398 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 HARS2P49590 506 aaKnown RBP11.82□□□□□ -0.52
PDE6C-201ENST00000371447 CDK7P50613 346 aa11.82□□□□□ -0.52
PDE6C-201ENST00000371447 HNRNPDQ14103 355 aaKnown RBP11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms