RNA–Protein interactions for RNA: ENST00000370818.7

GPC3-201, Transcript of glypican 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC3, Length 2,568 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC3-201ENST00000370818 KDELC1Q6UW63 502 aa12.93□□□□□ -0.34
GPC3-201ENST00000370818 CCDC117Q8IWD4 279 aaPredicted RBP12.93□□□□□ -0.34
GPC3-201ENST00000370818 SCUBE1Q8IWY4 988 aa12.93□□□□□ -0.34
GPC3-201ENST00000370818 SNRNP27Q8WVK2 155 aaKnown RBP12.93□□□□□ -0.34
GPC3-201ENST00000370818 VWCEQ96DN2 955 aa12.93□□□□□ -0.34
GPC3-201ENST00000370818 IMP4Q96G21 291 aaKnown RBP12.93□□□□□ -0.34
GPC3-201ENST00000370818 VPS39Q96JC1 886 aa12.93□□□□□ -0.34
GPC3-201ENST00000370818 PPP1R2P1Q96PQ5 205 aa12.93□□□□□ -0.34
GPC3-201ENST00000370818 FSD1LQ9BXM9 530 aa12.93□□□□□ -0.34
GPC3-201ENST00000370818 SAGE1Q9NXZ1 904 aa12.93□□□□□ -0.34
GPC3-201ENST00000370818 PAIP2BQ9ULR5 123 aaKnown RBP12.93□□□□□ -0.34
GPC3-201ENST00000370818 DOCK4Q8N1I0 1966 aa12.93□□□□□ -0.34
GPC3-201ENST00000370818 FNDC1Q4ZHG4 1894 aaPredicted RBP12.93□□□□□ -0.34
GPC3-201ENST00000370818 BPTFQ12830 3046 aa12.93□□□□□ -0.34
GPC3-201ENST00000370818 ESRRAP11474 423 aaPredicted RBP12.93□□□□□ -0.34
GPC3-201ENST00000370818 FGF3P11487 239 aaPredicted RBP12.93□□□□□ -0.34
GPC3-201ENST00000370818 VARSP26640 1264 aaKnown RBP12.93□□□□□ -0.34
GPC3-201ENST00000370818 GABRB3P28472 473 aa12.93□□□□□ -0.34
GPC3-201ENST00000370818 OR1D2P34982 312 aa12.93□□□□□ -0.34
GPC3-201ENST00000370818 CSRP3P50461 194 aa12.93□□□□□ -0.34
GPC3-201ENST00000370818 RENBPP51606 427 aa12.93□□□□□ -0.34
GPC3-201ENST00000370818 WNT3AP56704 352 aa12.93□□□□□ -0.34
GPC3-201ENST00000370818 MAXP61244 160 aa12.93□□□□□ -0.34
GPC3-201ENST00000370818 KRT72Q14CN4 511 aa12.93□□□□□ -0.34
GPC3-201ENST00000370818 ESRP1Q6NXG1 681 aaKnown RBP12.93□□□□□ -0.34
GPC3-201ENST00000370818 POTEHQ6S545 545 aa12.93□□□□□ -0.34
GPC3-201ENST00000370818 SKA1Q96BD8 255 aa12.93□□□□□ -0.34
GPC3-201ENST00000370818 PABPC5Q96DU9 382 aaKnown RBP12.93□□□□□ -0.34
GPC3-201ENST00000370818 RPRD1AQ96P16 312 aaPredicted RBP12.93□□□□□ -0.34
GPC3-201ENST00000370818 TTC1Q99614 292 aa12.93□□□□□ -0.34
GPC3-201ENST00000370818 RNF208Q9H0X6 261 aa12.93□□□□□ -0.34
GPC3-201ENST00000370818 CWH43Q9H720 699 aa12.93□□□□□ -0.34
GPC3-201ENST00000370818 NT5MQ9NPB1 228 aa12.93□□□□□ -0.34
GPC3-201ENST00000370818 FBXO6Q9NRD1 293 aaPredicted RBP12.93□□□□□ -0.34
GPC3-201ENST00000370818 ZDHHC7Q9NXF8 308 aa12.93□□□□□ -0.34
GPC3-201ENST00000370818 NDE1Q9NXR1 346 aa12.93□□□□□ -0.34
GPC3-201ENST00000370818 SLC2A6Q9UGQ3 507 aa12.93□□□□□ -0.34
GPC3-201ENST00000370818 TCAF1Q9Y4C2 921 aa12.93□□□□□ -0.34
GPC3-201ENST00000370818 MAGEC1O60732 1142 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 DNAJC6O75061 913 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 MMP2P08253 660 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 MNX1P50219 401 aaPredicted RBP12.92□□□□□ -0.34
GPC3-201ENST00000370818 BTG3Q14201 252 aaPredicted RBP12.92□□□□□ -0.34
GPC3-201ENST00000370818 MARC1Q5VT66 337 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 SLC39A5Q6ZMH5 540 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 CLEC14AQ86T13 490 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 ZC3HC1Q86WB0 502 aaKnown RBP12.92□□□□□ -0.34
GPC3-201ENST00000370818 ARID3BQ8IVW6 561 aaPredicted RBP12.92□□□□□ -0.34
GPC3-201ENST00000370818 CNTN4Q8IWV2 1026 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 TEX26Q8N6G2 289 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 FAM161BQ96MY7 647 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 ATP13A1Q9HD20 1204 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 TREX1Q9NSU2 369 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 A0A096LPK6 155 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 MAGEB3O15480 346 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 TIMM44O43615 452 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 ITM2AO43736 263 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 VAPBO95292 243 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 BAG2O95816 211 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 C2P06681 752 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 CCL5P13501 91 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 ZNF24P17028 368 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 ERFP50548 548 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 IRF9Q00978 393 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 TLE2Q04725 743 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 STX3Q13277 289 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 MED21Q13503 144 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 GRM3Q14832 879 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 POLD3Q15054 466 aaPredicted RBP12.92□□□□□ -0.34
GPC3-201ENST00000370818 PCSK7Q16549 785 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 USP41Q3LFD5 358 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 DNAJC14Q6Y2X3 702 aaPredicted RBP12.92□□□□□ -0.34
GPC3-201ENST00000370818 B3GNT6Q6ZMB0 384 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 ATG14Q6ZNE5 492 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 PDSS2Q86YH6 399 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 C10orf107Q8IVU9 208 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 PGBD5Q8N414 524 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 PTCD2Q8WV60 388 aaKnown RBP12.92□□□□□ -0.34
GPC3-201ENST00000370818 IGSF21Q96ID5 467 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 PANX3Q96QZ0 392 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 GPR22Q99680 433 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 SP110Q9HB58 689 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 ARNT2Q9HBZ2 717 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 MRM3Q9HC36 420 aaKnown RBP12.92□□□□□ -0.34
GPC3-201ENST00000370818 THAP1Q9NVV9 213 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 COPG2Q9UBF2 871 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 PPM1HQ9ULR3 514 aa12.92□□□□□ -0.34
GPC3-201ENST00000370818 HBS1LQ9Y450 684 aaKnown RBP12.92□□□□□ -0.34
GPC3-201ENST00000370818 RAMP2O60895 175 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 AHSGP02765 367 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 ACVRL1P37023 503 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 GALK1P51570 392 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 AP2B1P63010 937 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 DSC2Q02487 901 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 TNK2Q07912 1038 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 MSLNQ13421 630 aaPredicted RBP12.91□□□□□ -0.34
GPC3-201ENST00000370818 TMED1Q13445 227 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 CYLC2Q14093 348 aaPredicted RBP12.91□□□□□ -0.34
GPC3-201ENST00000370818 RIPOR1Q6ZS17 1223 aa12.91□□□□□ -0.34
GPC3-201ENST00000370818 DENND6AQ8IWF6 608 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms