RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 NTRK1P04629 796 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 TYMPP19971 482 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 RALGDSQ12967 914 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 INTS11Q5TA45 600 aaKnown RBP17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 DENND5AQ6IQ26 1287 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 CDC73Q6P1J9 531 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 KIAA0408Q6ZU52 694 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 NEK10Q6ZWH5 1172 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 PROSER1Q86XN7 944 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 CYP4X1Q8N118 509 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 LENG8Q96PV6 779 aaPredicted RBP17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 YIPF2Q9BWQ6 316 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 KLHL1Q9NR64 748 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 STXBP5LQ9Y2K9 1186 aa17.25■□□□□ 0.35
PTP4A1-201ENST00000370651 A0A0J9YYE9 177 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 FKBP1AP62942 108 aaKnown RBP17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 TIGD2Q4W5G0 525 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 KIAA0319LQ8IZA0 1049 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 C12orf29Q8N999 325 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 LPGAT1Q92604 370 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 LENG9Q96B70 501 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 BCLAF3A2AJT9 711 aaKnown RBP17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 ULK1O75385 1050 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 RPL38P63173 70 aaKnown RBP17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 WSCD1Q658N2 575 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 MAB21L3Q8N8X9 362 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 OR2T34Q8NGX1 318 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 OR2T3Q8NH03 318 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 SERAC1Q96JX3 654 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 SLC4A9Q96Q91 983 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 CPXM1Q96SM3 734 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 EBF3Q9H4W6 596 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 ZFP14Q9HCL3 533 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 POLD2P49005 469 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 CDK20Q8IZL9 346 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 CACTIN-AS1Q8N1I8 211 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 BANPQ8N9N5 519 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 SLC7A5P2Q9GIP4 190 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 RNF19AQ9NV58 838 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 MAGEL2Q9UJ55 1249 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 SPACA6W5XKT8 324 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 SLC26A3P40879 764 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 WDR4P57081 412 aaKnown RBP17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 EGFLAMQ63HQ2 1017 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 PLD5Q8N7P1 536 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 CNTD1Q8N815 330 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 NETO2Q8NC67 525 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 C10orf82Q8WW14 230 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 VWA7Q9Y334 891 aa17.24■□□□□ 0.35
PTP4A1-201ENST00000370651 SH3BGRLO75368 114 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 RPLP2P05387 115 aaKnown RBP17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 ANXA5P08758 320 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 PRDX6P30041 224 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 AQP4P55087 323 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 PLCL1Q15111 1095 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 SLCO6A1Q86UG4 719 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 DEPDC4Q8N2C3 294 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 UCMAQ8WVF2 138 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 ZFYVE28Q9HCC9 887 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 NOCTQ9UK39 431 aaKnown RBP17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 H3BMM5 538 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 FFAR3O14843 346 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 GPR42O15529 346 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 ZBTB14O43829 449 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 CCT3P49368 545 aaKnown RBP17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 PTPRNQ16849 979 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 CERCAMQ5T4B2 595 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 FKBP1CQ5VVH2 108 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 HPS1Q92902 700 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 YDJCA8MPS7 323 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 WNT10BO00744 389 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 SLC22A3O75751 556 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 SNHG28P0DPA3 235 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 COL6A2P12110 1019 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 CLK2P49760 499 aaKnown RBP17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 KLHL12Q53G59 568 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 SATL1Q86VE3 508 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 LRRC49Q8IUZ0 686 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 PLIN3O60664 434 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 ZBTB11O95625 1053 aaPredicted RBP17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 SLURP2P0DP57 97 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 ALFQ53S48 1182 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 PPM1JQ5JR12 505 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 CHMP1BQ7LBR1 199 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 POP5Q969H6 163 aaKnown RBP17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 REPS1Q96D71 796 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 PGLYRP2Q96PD5 576 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 TRIM39Q9HCM9 518 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 GTF2A1LQ9UNN4 478 aa17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 SAMHD1Q9Y3Z3 626 aaKnown RBP17.23■□□□□ 0.35
PTP4A1-201ENST00000370651 CCDC182A6NF36 153 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 PSMA3P25788 255 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 HOXA10P31260 410 aaPredicted RBP17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 ATP6V0D1P61421 351 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 IRF8Q02556 426 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 NPY5RQ15761 445 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 ZSWIM7Q19AV6 140 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 RALGPS1Q5JS13 557 aa17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 PPP1R26Q5T8A7 1209 aaPredicted RBP17.22■□□□□ 0.35
PTP4A1-201ENST00000370651 EIF3MQ7L2H7 374 aaKnown RBP17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms