RNA–Protein interactions for RNA: ENST00000370022.9

PRPF38B-202, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 1,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-202ENST00000370022 RBM15Q96T37 977 aaKnown RBP eCLIP15.67■□□□□ 0.13e-7■■■□□ 18.6
PRPF38B-202ENST00000370022 TUBB2BQ9BVA1 445 aa15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 CD93Q9NPY3 652 aa15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 FAM153AQ9UHL3 310 aa15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 TPX2Q9ULW0 747 aaKnown RBP15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 RPL26L1Q9UNX3 145 aaKnown RBP15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 AAR2Q9Y312 384 aaKnown RBP15.67■□□□□ 0.1
PRPF38B-202ENST00000370022 GOLGA6CA6NDK9 693 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 GOLGA6BA6NDN3 693 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 LRRC72A6NJI9 287 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 MAP3K13O43283 966 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 AP1G1O43747 822 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 FZD6O60353 706 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 NDUFS2O75306 463 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 PGLSO95336 258 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 IFNB1P01574 187 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 GOLGA6DP0CG33 693 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 XPAP23025 273 aaPredicted RBP15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 COILP38432 576 aaPredicted RBP15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 ADPRHP54922 357 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 MPP3Q13368 585 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 FAM124AQ86V42 546 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 CADM4Q8NFZ8 388 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 PDCD6IPQ8WUM4 868 aaKnown RBP15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 ZNF592Q92610 1267 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 LRRC45Q96CN5 670 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 RUNDC3BQ96NL0 473 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 ADGRE3Q9BY15 652 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 PREBQ9HCU5 417 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 GOLGA6AQ9NYA3 693 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 PAK5Q9P286 719 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 PHTF1Q9UMS5 762 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 PCDHB9Q9Y5E1 797 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 UPK3BL1B0FP48 263 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 UPK3BL2E5RIL1 263 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 HRO43593 1189 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 SEMA4FO95754 770 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 CPP00450 1065 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 EPOP01588 193 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 ACSL1P33121 698 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 TNNT3P45378 269 aaPredicted RBP15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 KCNJ1P48048 391 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 GEMP55040 296 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 ELP6Q0PNE2 266 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 ERAP2Q6P179 960 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 NEK5Q6P3R8 708 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 OR2T34Q8NGX1 318 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 OR14C36Q8NHC7 312 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 SPATA22Q8NHS9 363 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 PCDH9Q9HC56 1237 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 MBD1Q9UIS9 605 aaPredicted RBP15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 CDC23Q9UJX2 597 aa15.66■□□□□ 0.1
PRPF38B-202ENST00000370022 PLK4O00444 970 aa15.65■□□□□ 0.1
PRPF38B-202ENST00000370022 TSPAN6O43657 245 aa15.65■□□□□ 0.1
PRPF38B-202ENST00000370022 URI1O94763 535 aaPredicted RBP15.65■□□□□ 0.1
PRPF38B-202ENST00000370022 GAS8O95995 478 aa15.65■□□□□ 0.1
PRPF38B-202ENST00000370022 MT-CYBP00156 380 aaPredicted RBP15.65■□□□□ 0.1
PRPF38B-202ENST00000370022 TIMP2P16035 220 aa15.65■□□□□ 0.1
PRPF38B-202ENST00000370022 PSMB4P28070 264 aa15.65■□□□□ 0.1
PRPF38B-202ENST00000370022 FDFT1P37268 417 aa15.65■□□□□ 0.1
PRPF38B-202ENST00000370022 RPL6Q02878 288 aaKnown RBP15.65■□□□□ 0.1
PRPF38B-202ENST00000370022 CDK18Q07002 472 aa15.65■□□□□ 0.1
PRPF38B-202ENST00000370022 CKAP4Q07065 602 aaKnown RBP15.65■□□□□ 0.1
PRPF38B-202ENST00000370022 IHHQ14623 411 aa15.65■□□□□ 0.1
PRPF38B-202ENST00000370022 TTC27Q6P3X3 843 aa15.65■□□□□ 0.1
PRPF38B-202ENST00000370022 CEP68Q76N32 757 aa15.65■□□□□ 0.1
PRPF38B-202ENST00000370022 ZSWIM9Q86XI8 627 aa15.65■□□□□ 0.1
PRPF38B-202ENST00000370022 FAM160A2Q8N612 972 aaPredicted RBP15.65■□□□□ 0.1
PRPF38B-202ENST00000370022 FOXJ1Q92949 421 aa15.65■□□□□ 0.1
PRPF38B-202ENST00000370022 IFT43Q96FT9 208 aa15.65■□□□□ 0.1
PRPF38B-202ENST00000370022 ZC3H10Q96K80 434 aaKnown RBP15.65■□□□□ 0.1
PRPF38B-202ENST00000370022 PPIL1Q9Y3C6 166 aa15.65■□□□□ 0.1
PRPF38B-202ENST00000370022 FADS3Q9Y5Q0 445 aa15.65■□□□□ 0.1
PRPF38B-202ENST00000370022 PLXND1Q9Y4D7 1925 aa15.65■□□□□ 0.1
PRPF38B-202ENST00000370022 PDE2AO00408 941 aaPredicted RBP15.64■□□□□ 0.09
PRPF38B-202ENST00000370022 AREL1O15033 823 aa15.64■□□□□ 0.09
PRPF38B-202ENST00000370022 PSMD3O43242 534 aa15.64■□□□□ 0.09
PRPF38B-202ENST00000370022 RHOBTB1O94844 696 aa15.64■□□□□ 0.09
PRPF38B-202ENST00000370022 GRIA4P48058 902 aa15.64■□□□□ 0.09
PRPF38B-202ENST00000370022 EPHB1P54762 984 aa15.64■□□□□ 0.09
PRPF38B-202ENST00000370022 TAS2R38P59533 333 aa15.64■□□□□ 0.09
PRPF38B-202ENST00000370022 SIM2Q14190 667 aaPredicted RBP15.64■□□□□ 0.09
PRPF38B-202ENST00000370022 ELF2Q15723 593 aa15.64■□□□□ 0.09
PRPF38B-202ENST00000370022 CCDC70Q6NSX1 233 aa15.64■□□□□ 0.09
PRPF38B-202ENST00000370022 USP45Q70EL2 814 aa15.64■□□□□ 0.09
PRPF38B-202ENST00000370022 LPCAT2Q7L5N7 544 aa15.64■□□□□ 0.09
PRPF38B-202ENST00000370022 KLHDC8BQ8IXV7 354 aa15.64■□□□□ 0.09
PRPF38B-202ENST00000370022 FRMD1Q8N878 549 aa15.64■□□□□ 0.09
PRPF38B-202ENST00000370022 PIH1D2Q8WWB5 315 aa15.64■□□□□ 0.09
PRPF38B-202ENST00000370022 SLCO2A1Q92959 643 aa15.64■□□□□ 0.09
PRPF38B-202ENST00000370022 FAM122AQ96E09 287 aa15.64■□□□□ 0.09
PRPF38B-202ENST00000370022 SCRN2Q96FV2 425 aa15.64■□□□□ 0.09
PRPF38B-202ENST00000370022 OXNAD1Q96HP4 312 aaPredicted RBP15.64■□□□□ 0.09
PRPF38B-202ENST00000370022 FEM1CQ96JP0 617 aa15.64■□□□□ 0.09
PRPF38B-202ENST00000370022 GPR174Q9BXC1 333 aa15.64■□□□□ 0.09
PRPF38B-202ENST00000370022 FSD1LQ9BXM9 530 aa15.64■□□□□ 0.09
PRPF38B-202ENST00000370022 DUSP15Q9H1R2 295 aaPredicted RBP15.64■□□□□ 0.09
PRPF38B-202ENST00000370022 EPC1Q9H2F5 836 aa15.64■□□□□ 0.09
PRPF38B-202ENST00000370022 PCYOX1Q9UHG3 505 aa15.64■□□□□ 0.09
PRPF38B-202ENST00000370022 CHKBQ9Y259 395 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms