RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 TPH1P17752 444 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 PSMC3P17980 439 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 GALNT2Q10471 571 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 CEACAM7Q14002 265 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 GPNMBQ14956 572 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 ANO4Q32M45 955 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 PPM1LQ5SGD2 360 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 LIPMQ5VYY2 423 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 CLEC20AQ6ZU45 233 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 KCNMB4Q86W47 210 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 CROCCP3Q8IVE0 287 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 TSPAN14Q8NG11 270 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 SNRNP27Q8WVK2 155 aaKnown RBP14.85□□□□□ -0.03
PRKN-204ENST00000366896 HIPK3Q9H422 1215 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 ZNF385DQ9H6B1 395 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 WDR55Q9H6Y2 383 aaPredicted RBP14.85□□□□□ -0.03
PRKN-204ENST00000366896 WDR6Q9NNW5 1121 aaKnown RBP14.85□□□□□ -0.03
PRKN-204ENST00000366896 CHRAC1Q9NRG0 131 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 FAIMQ9NVQ4 179 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 CACNG4Q9UBN1 327 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 SNX10Q9Y5X0 201 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 NEMP1O14524 444 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 BCAS2O75934 225 aaPredicted RBP14.85□□□□□ -0.03
PRKN-204ENST00000366896 ZNF26P17031 533 aaPredicted RBP14.85□□□□□ -0.03
PRKN-204ENST00000366896 PRKAA1Q13131 559 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 KIAA0319Q5VV43 1072 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 TWF2Q6IBS0 349 aaKnown RBP14.85□□□□□ -0.03
PRKN-204ENST00000366896 POTEHQ6S545 545 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 SIX6OS1Q8N1H7 587 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 TMEM151AQ8N4L1 468 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 DPF3Q92784 378 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 VPS39Q96JC1 886 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 IARS2Q9NSE4 1012 aaKnown RBP14.85□□□□□ -0.03
PRKN-204ENST00000366896 UBP1Q9NZI7 540 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 SH3GLB1Q9Y371 365 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 RNF11Q9Y3C5 154 aa14.85□□□□□ -0.03
PRKN-204ENST00000366896 TK2O00142 265 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 CACNG3O60359 315 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 NBNO60934 754 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 LRPAP1P30533 357 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 MSX2P35548 267 aaPredicted RBP14.84□□□□□ -0.03
PRKN-204ENST00000366896 RPL14P50914 215 aaKnown RBP14.84□□□□□ -0.03
PRKN-204ENST00000366896 TKTL1P51854 596 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 MAP3K7CLP57077 242 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 TXNL4AP83876 142 aaKnown RBP14.84□□□□□ -0.03
PRKN-204ENST00000366896 DSC3Q14574 896 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 RFTN1Q14699 578 aaPredicted RBP14.84□□□□□ -0.03
PRKN-204ENST00000366896 PGAM4Q8N0Y7 254 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 CCT7Q99832 543 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 KIFC1Q9BW19 673 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 C1QTNF1Q9BXJ1 281 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 RHOJQ9H4E5 214 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 C20orf96Q9NUD7 363 aaPredicted RBP14.84□□□□□ -0.03
PRKN-204ENST00000366896 ZNHIT2Q9UHR6 403 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 FBXW11Q9UKB1 542 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 H0YJX3 145 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 GABRDO14764 452 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 MGEA5O60502 916 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 CLTBP09497 229 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 PTPN1P18031 435 aaKnown RBP14.84□□□□□ -0.03
PRKN-204ENST00000366896 NFKB1P19838 968 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 ME2P23368 584 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 PKNOX1P55347 436 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 LILRA4P59901 499 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 TPI1P60174 286 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 PLOD1Q02809 727 aaPredicted RBP14.84□□□□□ -0.03
PRKN-204ENST00000366896 PPP2R5DQ14738 602 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 SEL1L3Q68CR1 1132 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 GPRIN1Q7Z2K8 1008 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.84□□□□□ -0.03
PRKN-204ENST00000366896 TRIML2Q8N7C3 387 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 ZBTB8BQ8NAP8 495 aaPredicted RBP14.84□□□□□ -0.03
PRKN-204ENST00000366896 RIN3Q8TB24 985 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 PDCD6IPQ8WUM4 868 aaKnown RBP14.84□□□□□ -0.03
PRKN-204ENST00000366896 KLHL32Q96NJ5 620 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 ACE2Q9BYF1 805 aaPredicted RBP14.84□□□□□ -0.03
PRKN-204ENST00000366896 ULBP1Q9BZM6 244 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 MRGBPQ9NV56 204 aa14.84□□□□□ -0.03
PRKN-204ENST00000366896 SCN5AQ14524 2016 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 YJEFN3A6XGL0 299 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 TADA2AO75478 443 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 SAT1P21673 171 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 NMBRP28336 390 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 CDH17Q12864 832 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 CBX3Q13185 183 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 CYTH1Q15438 398 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 WSCD1Q658N2 575 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 NAPEPLDQ6IQ20 393 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 Q6ZNX1 250 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 LINC00523Q86TU6 105 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 CCDC117Q8IWD4 279 aaPredicted RBP14.83□□□□□ -0.04
PRKN-204ENST00000366896 CNTN4Q8IWV2 1026 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 SMYD1Q8NB12 490 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 SMG8Q8ND04 991 aaKnown RBP14.83□□□□□ -0.04
PRKN-204ENST00000366896 STYXQ8WUJ0 223 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 TMIGD2Q96BF3 282 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 RCN3Q96D15 328 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 TEKT5Q96M29 485 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 MED10Q9BTT4 135 aa14.83□□□□□ -0.04
PRKN-204ENST00000366896 CNGB3Q9NQW8 809 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms