RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 OVOS1Q6IE37 1185 aa5.41□□□□□ -1.54
CDC42BPA-204ENST00000366767 ZYG11AQ6WRX3 759 aa5.41□□□□□ -1.54
CDC42BPA-204ENST00000366767 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-204ENST00000366767 RRM2BQ7LG56 351 aa5.41□□□□□ -1.54
CDC42BPA-204ENST00000366767 WDTC1Q8N5D0 677 aa5.41□□□□□ -1.54
CDC42BPA-204ENST00000366767 DGCR14Q96DF8 476 aaKnown RBP5.41□□□□□ -1.54
CDC42BPA-204ENST00000366767 OTUB1Q96FW1 271 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-204ENST00000366767 CDRT15Q96T59 188 aa5.41□□□□□ -1.54
CDC42BPA-204ENST00000366767 DENND2DQ9H6A0 471 aaPredicted RBP5.41□□□□□ -1.54
CDC42BPA-204ENST00000366767 PCDH12Q9NPG4 1184 aa5.41□□□□□ -1.54
CDC42BPA-204ENST00000366767 DDX60LQ5H9U9 1706 aaKnown RBP5.41□□□□□ -1.54
CDC42BPA-204ENST00000366767 KCNK1O00180 336 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 VPS26AO75436 327 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 PROZP22891 400 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 OR1G1P47890 313 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 LGALS3BPQ08380 585 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 PAFAH1B3Q15102 231 aaKnown RBP5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 TCHHL1Q5QJ38 904 aaPredicted RBP5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 C11orf88Q6PI97 169 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 UTS2BQ765I0 119 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 C16orf62Q7Z3J2 963 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 SZRD1Q7Z422 152 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 NAT14Q8WUY8 206 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 HOPXQ9BPY8 73 aaPredicted RBP5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 WDR12Q9GZL7 423 aaKnown RBP5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 NMUR2Q9GZQ4 415 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 ABCB10Q9NRK6 738 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 ZSCAN32Q9NX65 697 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 CNTN3Q9P232 1028 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 FAM32AQ9Y421 112 aaKnown RBP5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 PTPRJQ12913 1337 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 SMIM28A0A1B0GU29 152 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 PRR5-ARHGAP8B1AHC4 643 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 C2P06681 752 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 SNRPB2P08579 225 aaKnown RBP5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 CES1P23141 567 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 ALDH1A3P47895 512 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 TUFMP49411 452 aaKnown RBP5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 IST1P53990 364 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 ARHGAP8P85298 464 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 FASTKQ14296 549 aaKnown RBP5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 FUT11Q495W5 492 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 TBCELQ5QJ74 424 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 ISLR2Q6UXK2 745 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 RTP4Q96DX8 246 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 SERHL2Q9H4I8 314 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 SERHLQ9NQF3 203 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 FBXO6Q9NRD1 293 aaPredicted RBP5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 RBPJLQ9UBG7 517 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 PSMD13Q9UNM6 376 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 EIF3LQ9Y262 564 aaKnown RBP5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 MTF2Q9Y483 593 aaPredicted RBP5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 KLHL33A6NCF5 533 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 NPHS1O60500 1241 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 PEX11AO75192 247 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 VAPBO95292 243 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 NFKB1P19838 968 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 TALDO1P37837 337 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 GRIA4P48058 902 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 OLR1P78380 273 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 IL5RAQ01344 420 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 SMARCB1Q12824 385 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 FRG1Q14331 258 aaKnown RBP5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 ALYREFQ86V81 257 aaKnown RBP5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 RBM15BQ8NDT2 890 aaKnown RBP5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 LRRC20Q8TCA0 184 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 SPOCK2Q92563 424 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 RORBQ92753 470 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 POLR1EQ9GZS1 481 aaKnown RBP5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 VPS45Q9NRW7 570 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 TAS2R13Q9NYV9 303 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 DTLQ9NZJ0 730 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 POLG2Q9UHN1 485 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 MYO1DO94832 1006 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 SERPINF2P08697 491 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 UQCRBP14927 111 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 CCR3P51677 355 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 QPRTQ15274 297 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 ANKS6Q68DC2 871 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 TXNDC11Q6PKC3 985 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 RPRD1AQ96P16 312 aaPredicted RBP5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 ADGRE3Q9BY15 652 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 OXCT2Q9BYC2 517 aaPredicted RBP5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 GDAP2Q9NXN4 497 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 EHD3Q9NZN3 535 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 RNF112Q9ULX5 631 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 TRIM17Q9Y577 477 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 COL24A1Q17RW2 1714 aa5.4□□□□□ -1.54
CDC42BPA-204ENST00000366767 NINQ8N4C6 2090 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 AVILO75366 819 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 CSDE1O75534 798 aaKnown RBP5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 STBD1O95210 358 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 SP100P23497 879 aaPredicted RBP5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 CCNFP41002 786 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 TBX4P57082 545 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 GBE1Q04446 702 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 BNIP2Q12982 314 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 MAP2K5Q13163 448 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 POU6F1Q14863 301 aa5.4□□□□□ -1.55
CDC42BPA-204ENST00000366767 ZSWIM7Q19AV6 140 aa5.4□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms