RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 FAM47BQ8NA70 645 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 PCSK9Q8NBP7 692 aaKnown RBP11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 UBE2E3Q969T4 207 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 ZNF487B1APH4 448 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 PGS1Q32NB8 556 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 PLEKHM3Q6ZWE6 761 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 PTGR2Q8N8N7 351 aaPredicted RBP11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 ULBP1Q9BZM6 244 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 SLC39A8Q9C0K1 460 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 TBX10O75333 385 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 FGFR3P22607 806 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 ADRA1BP35368 520 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 MAPKAPK3Q16644 382 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 UBR7Q8N806 425 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 EZH1Q92800 747 aaPredicted RBP11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 RBM4BQ9BQ04 359 aaKnown RBP11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 RBM4Q9BWF3 364 aaKnown RBP11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 POMPQ9Y244 141 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 SLC12A8A0AV02 714 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 LYPLA1O75608 230 aaPredicted RBP11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 ZBTB7AO95365 584 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 HSMCR30P0CW71 290 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 ITGA2P17301 1181 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 DPYSL2Q16555 572 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 ZNF605Q86T29 641 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 SLC41A1Q8IVJ1 513 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 RAD18Q9NS91 495 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 MARCH2Q9P0N8 246 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 VWA7Q9Y334 891 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 PCDHB7Q9Y5E2 793 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 COL1A1P02452 1464 aaPredicted RBP11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 KRT87PA6NCN2 255 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 HGFP14210 728 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 SOAT1P35610 550 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 SEMA5AQ13591 1074 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 SNX6Q9UNH7 406 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 ADCY6O43306 1168 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 IFNGR2P38484 337 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 RAB2BQ8WUD1 216 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 YTHDF1Q9BYJ9 559 aaKnown RBP11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 FADS3Q9Y5Q0 445 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 CACNA1SQ13698 1873 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 ULK1O75385 1050 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 H6PDO95479 791 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 BSNDQ8WZ55 320 aa11.87□□□□□ -0.51
CDC42BPA-202ENST00000366764 PEX2P28328 305 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 ALDH7A1P49419 539 aaKnown RBP11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 CASP12Q6UXS9 341 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 FAM228AQ86W67 206 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 SEC22BO75396 215 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 SEC24AO95486 1093 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 ATAD3BQ5T9A4 648 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 RNF180Q86T96 592 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 NAT8LQ8N9F0 302 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 CLPTM1LQ96KA5 538 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 PNPOQ9NVS9 261 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 PIH1D1Q9NWS0 290 aaKnown RBP11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 YDJCA8MPS7 323 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 CSPG5O95196 566 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 PRKD1Q15139 912 aaPredicted RBP11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 PPP1R26Q5T8A7 1209 aaPredicted RBP11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 CACNA2D2Q9NY47 1150 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 IGSF9Q9P2J2 1179 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 DUSP12Q9UNI6 340 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 MYL12AP19105 171 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 YWHAQP27348 245 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 TNFSF9P41273 254 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 MTTPP55157 894 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 GANCQ8TET4 914 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 GNEQ9Y223 722 aaKnown RBP11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 DYRK1BQ9Y463 629 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 FAM189A1O60320 539 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 ARHGAP17Q68EM7 881 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 OR8H2Q8N162 312 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 IRGQQ8WZA9 623 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 MCRS1Q96EZ8 462 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 TDRD1Q9BXT4 1180 aaKnown RBP11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 ZYG11BQ9C0D3 744 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 NUDT5Q9UKK9 219 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 SMIM11AP58511 58 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 KCNJ11Q14654 390 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 ARHGEF4Q9NR80 690 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 PTGES3LE9PB15 166 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 MATN2O00339 956 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 ZMPSTE24O75844 475 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 CYP3A5P20815 502 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 TPP2P29144 1249 aaPredicted RBP11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 TGM3Q08188 693 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 C9orf57Q5W0N0 161 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 MTG1Q9BT17 334 aaPredicted RBP11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 ZFYVE28Q9HCC9 887 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 SESN1Q9Y6P5 492 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 ALOX15P16050 662 aaPredicted RBP11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 HOXD13P35453 343 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 CD86P42081 329 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 MAPK9P45984 424 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 DLG1Q12959 904 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 FSTL4Q6MZW2 842 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 TMC5Q6UXY8 1006 aa11.86□□□□□ -0.51
CDC42BPA-202ENST00000366764 PAPSS1O43252 624 aaPredicted RBP11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms