RNA–Protein interactions for RNA: ENST00000366595.7

NID1-202, Transcript of nidogen 1, humanhuman

TSL 1 (best) BASIC

Gene NID1, Length 5,412 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-202ENST00000366595 NOL11Q9H8H0 719 aaKnown RBP16.85■□□□□ 0.29
NID1-202ENST00000366595 GPRC5CQ9NQ84 441 aa16.85■□□□□ 0.29
NID1-202ENST00000366595 EFR3BQ9Y2G0 817 aa16.85■□□□□ 0.29
NID1-202ENST00000366595 CARNS1A5YM72 827 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 RGS10O43665 173 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 MPZL2O60487 215 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 ARF4P18085 180 aaPredicted RBP16.84■□□□□ 0.29
NID1-202ENST00000366595 MAGEA2P43356 314 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 PRKAG1P54619 331 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 ADIGQ0VDE8 80 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 CREG2Q8IUH2 290 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 ZNF214Q9UL59 606 aaPredicted RBP16.84■□□□□ 0.29
NID1-202ENST00000366595 OR10H1Q9Y4A9 318 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 GPR75-ASB3A0A0A6YYF3 556 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 RBMXL2O75526 392 aaKnown RBP16.84■□□□□ 0.29
NID1-202ENST00000366595 KRT33AO76009 404 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 BST1Q10588 318 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 TTMPQ5BVD1 217 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 TUBA3EQ6PEY2 450 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 CRTC3Q6UUV7 619 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 ZC3H10Q96K80 434 aaKnown RBP16.84■□□□□ 0.29
NID1-202ENST00000366595 SPG21Q9NZD8 308 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 MICAL2O94851 1124 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 HGFP14210 728 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 NDST1P52848 882 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 RIPPLY1Q0D2K3 151 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 ELP6Q0PNE2 266 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 EIF2S3LQ2VIR3 472 aaKnown RBP16.84■□□□□ 0.29
NID1-202ENST00000366595 HECTD3Q5T447 861 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 C16orf46Q6P387 395 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 FRMD7Q6ZUT3 714 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 C1GALT1C1Q96EU7 318 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 AHCYL2Q96HN2 611 aaKnown RBP16.84■□□□□ 0.29
NID1-202ENST00000366595 POPDC2Q9HBU9 364 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 TRNAU1APQ9NX07 287 aaKnown RBP16.84■□□□□ 0.29
NID1-202ENST00000366595 TELO2Q9Y4R8 837 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 FADS3Q9Y5Q0 445 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 H3BNH8 94 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 GCATO75600 419 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 TGDSO95455 350 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 AXLP30530 894 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 CLCN3P51790 818 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 KCNJ2P63252 427 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 TUBA3CQ13748 450 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 CWF19L1Q69YN2 538 aaKnown RBP16.84■□□□□ 0.29
NID1-202ENST00000366595 APTXQ7Z2E3 356 aaKnown RBP16.84■□□□□ 0.29
NID1-202ENST00000366595 METTL3Q86U44 580 aaKnown RBP16.84■□□□□ 0.29
NID1-202ENST00000366595 MINDY2Q8NBR6 621 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 FBXO10Q9UK96 956 aa16.84■□□□□ 0.29
NID1-202ENST00000366595 GNB5O14775 395 aa16.83■□□□□ 0.29
NID1-202ENST00000366595 SLC6A2P23975 617 aa16.83■□□□□ 0.29
NID1-202ENST00000366595 RPS12P25398 132 aaKnown RBP16.83■□□□□ 0.29
NID1-202ENST00000366595 RBL1P28749 1068 aa16.83■□□□□ 0.29
NID1-202ENST00000366595 MIPP30301 263 aa16.83■□□□□ 0.29
NID1-202ENST00000366595 PPP2R2BQ00005 443 aa16.83■□□□□ 0.29
NID1-202ENST00000366595 CBX3Q13185 183 aa16.83■□□□□ 0.29
NID1-202ENST00000366595 MEA1Q16626 185 aa16.83■□□□□ 0.29
NID1-202ENST00000366595 THAP5Q7Z6K1 395 aa16.83■□□□□ 0.29
NID1-202ENST00000366595 DSELQ8IZU8 1212 aa16.83■□□□□ 0.29
NID1-202ENST00000366595 SLC34A3Q8N130 599 aa16.83■□□□□ 0.29
NID1-202ENST00000366595 LRRC20Q8TCA0 184 aa16.83■□□□□ 0.29
NID1-202ENST00000366595 C12orf66Q96MD2 445 aa16.83■□□□□ 0.29
NID1-202ENST00000366595 SENP6Q9GZR1 1112 aaPredicted RBP16.83■□□□□ 0.29
NID1-202ENST00000366595 IQCMA0A1B0GVH7 501 aa16.83■□□□□ 0.29
NID1-202ENST00000366595 SMCO3A2RU48 225 aa16.83■□□□□ 0.29
NID1-202ENST00000366595 ZSCAN5CA6NGD5 496 aaPredicted RBP16.83■□□□□ 0.29
NID1-202ENST00000366595 ORC5O43913 435 aa16.83■□□□□ 0.29
NID1-202ENST00000366595 TRMUO75648 421 aaKnown RBP16.83■□□□□ 0.29
NID1-202ENST00000366595 PRLP01236 227 aa16.83■□□□□ 0.29
NID1-202ENST00000366595 DRD4P21917 467 aa16.83■□□□□ 0.29
NID1-202ENST00000366595 KDELR1P24390 212 aa16.83■□□□□ 0.29
NID1-202ENST00000366595 PPP4CP60510 307 aa16.83■□□□□ 0.29
NID1-202ENST00000366595 RAB10P61026 200 aa16.83■□□□□ 0.29
NID1-202ENST00000366595 ZPBP2Q6X784 338 aa16.83■□□□□ 0.29
NID1-202ENST00000366595 SPAG16Q8N0X2 631 aa16.83■□□□□ 0.29
NID1-202ENST00000366595 FAM47BQ8NA70 645 aa16.83■□□□□ 0.29
NID1-202ENST00000366595 OR10H5Q8NGA6 315 aa16.83■□□□□ 0.29
NID1-202ENST00000366595 KCND1Q9NSA2 647 aa16.83■□□□□ 0.29
NID1-202ENST00000366595 CIDEBQ9UHD4 219 aa16.83■□□□□ 0.29
NID1-202ENST00000366595 A0A0B4J269 797 aa16.83■□□□□ 0.28
NID1-202ENST00000366595 TRIM3O75382 744 aaPredicted RBP16.83■□□□□ 0.28
NID1-202ENST00000366595 MAPK9P45984 424 aa16.83■□□□□ 0.28
NID1-202ENST00000366595 PTPN5P54829 565 aa16.83■□□□□ 0.28
NID1-202ENST00000366595 TNFAIP8L1Q8WVP5 186 aa16.83■□□□□ 0.28
NID1-202ENST00000366595 ERMAPQ96PL5 475 aaPredicted RBP16.83■□□□□ 0.28
NID1-202ENST00000366595 PANX1Q96RD7 426 aa16.83■□□□□ 0.28
NID1-202ENST00000366595 UMODL1Q5DID0 1318 aa16.83■□□□□ 0.28
NID1-202ENST00000366595 MCIDASD6RGH6 385 aa16.83■□□□□ 0.28
NID1-202ENST00000366595 NR4A1P22736 598 aa16.83■□□□□ 0.28
NID1-202ENST00000366595 TFAP2DQ7Z6R9 452 aa16.83■□□□□ 0.28
NID1-202ENST00000366595 C17orf50Q8WW18 174 aa16.83■□□□□ 0.28
NID1-202ENST00000366595 TMCO6Q96DC7 493 aa16.83■□□□□ 0.28
NID1-202ENST00000366595 RBM4BQ9BQ04 359 aaKnown RBP16.83■□□□□ 0.28
NID1-202ENST00000366595 RBM4Q9BWF3 364 aaKnown RBP16.83■□□□□ 0.28
NID1-202ENST00000366595 MROH8Q9H579 483 aa16.83■□□□□ 0.28
NID1-202ENST00000366595 IFT80Q9P2H3 777 aaPredicted RBP16.83■□□□□ 0.28
NID1-202ENST00000366595 MAN2B2Q9Y2E5 1009 aa16.83■□□□□ 0.28
NID1-202ENST00000366595 GAKO14976 1311 aa16.83■□□□□ 0.28
NID1-202ENST00000366595 RFXANKO14593 260 aa16.83■□□□□ 0.28
NID1-202ENST00000366595 FTH1P02794 183 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms