RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 SERPINB13Q9UIV8 391 aa0.11□□□□□ -2.39
RNU6-54P-201ENST00000365563 CDH22Q9UJ99 828 aa0.11□□□□□ -2.39
RNU6-54P-201ENST00000365563 FBXO4Q9UKT5 387 aa0.11□□□□□ -2.39
RNU6-54P-201ENST00000365563 EXO1Q9UQ84 846 aaKnown RBP0.11□□□□□ -2.39
RNU6-54P-201ENST00000365563 HPSEQ9Y251 543 aa0.11□□□□□ -2.39
RNU6-54P-201ENST00000365563 AMDHD2Q9Y303 409 aa0.11□□□□□ -2.39
RNU6-54P-201ENST00000365563 PYGO1Q9Y3Y4 419 aa0.11□□□□□ -2.39
RNU6-54P-201ENST00000365563 ZNF175Q9Y473 711 aa0.11□□□□□ -2.39
RNU6-54P-201ENST00000365563 PSAT1Q9Y617 370 aa0.11□□□□□ -2.39
RNU6-54P-201ENST00000365563 STK36Q9NRP7 1315 aa0.11□□□□□ -2.39
RNU6-54P-201ENST00000365563 TENM3Q9P273 2699 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 A0A096LPK6 155 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 TRIM49BA6NDI0 452 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 ACOD1A6NK06 481 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 A6NL46 340 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 FAM157AC9JC47 383 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 HNRNPDLO14979 420 aaKnown RBP0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 SYNGR3O43761 229 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 MYCLP1P12525 358 aaPredicted RBP0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 ALADP13716 330 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 ZNF19P17023 458 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 ZFP36L2P47974 494 aaKnown RBP0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 OAZ1P54368 228 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 ARHGAP8P85298 464 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 SHC2P98077 582 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 RHAGQ02094 409 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 SPOCK1Q08629 439 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 GPS1Q13098 491 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 PUM3Q15397 648 aaKnown RBP0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 EFNB3Q15768 340 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 ZNF79Q15937 498 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 P3H1Q32P28 736 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 KIAA1644Q3SXP7 199 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 ZC2HC1CQ53FD0 456 aaPredicted RBP0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 KRTCAP3Q53RY4 240 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 TECRLQ5HYJ1 363 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 TMCO4Q5TGY1 634 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 MANEALQ5VSG8 457 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 EFCAB2Q5VUJ9 269 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 GFRALQ6UXV0 394 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 FRRS1Q6ZNA5 592 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 SHFQ7M4L6 423 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 KRT28Q7Z3Y7 464 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 ZC3HC1Q86WB0 502 aaKnown RBP0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 ODF3L1Q8IXM7 274 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 ZNF611Q8N823 705 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 SUMF1Q8NBK3 374 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 C1orf162Q8NEQ5 155 aaPredicted RBP0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 OR56A3Q8NH54 315 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 SPATA22Q8NHS9 363 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 FCAMRQ8WWV6 532 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 UBXN4Q92575 508 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 ARHGEF26Q96DR7 871 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 PHYHIPLQ96FC7 376 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 SUCLG2Q96I99 432 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 NSMCE3Q96MG7 304 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 NEUROD6Q96NK8 337 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 FRG2BQ96QU4 278 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 POLR3CQ9BUI4 534 aaPredicted RBP0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 MSTO1Q9BUK6 570 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 STK31Q9BXU1 1019 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 YTHDF1Q9BYJ9 559 aaKnown RBP0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 GTPBP4Q9BZE4 634 aaKnown RBP0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 NPFFR1Q9GZQ6 430 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 OSBPL5Q9H0X9 879 aaPredicted RBP0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 CSTL1Q9H114 145 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 UPF3AQ9H1J1 476 aaKnown RBP0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 ATP6V0A4Q9HBG4 840 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 NOX4Q9NPH5 578 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 TYW1Q9NV66 732 aaKnown RBP0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 MCM9Q9NXL9 1143 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 TMEM181Q9P2C4 612 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 SLC9A2Q9UBY0 812 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 RGS17Q9UGC6 210 aaPredicted RBP0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 MUTYHQ9UIF7 546 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 KCNJ14Q9UNX9 436 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 PRAG1Q86YV5 1406 aa0.1□□□□□ -2.39
RNU6-54P-201ENST00000365563 TDRD15B5MCY1 1934 aaKnown RBP0.09□□□□□ -2.39
RNU6-54P-201ENST00000365563 A0A087WW49 117 aa0.09□□□□□ -2.4
RNU6-54P-201ENST00000365563 A0A087X0B3 334 aa0.09□□□□□ -2.4
RNU6-54P-201ENST00000365563 A0A1W2PPR1 153 aa0.09□□□□□ -2.4
RNU6-54P-201ENST00000365563 TNPO2O14787 897 aaKnown RBP0.09□□□□□ -2.4
RNU6-54P-201ENST00000365563 WNT9BO14905 357 aa0.09□□□□□ -2.4
RNU6-54P-201ENST00000365563 TBX3O15119 743 aa0.09□□□□□ -2.4
RNU6-54P-201ENST00000365563 GPR39O43194 453 aa0.09□□□□□ -2.4
RNU6-54P-201ENST00000365563 C22orf31O95567 290 aa0.09□□□□□ -2.4
RNU6-54P-201ENST00000365563 HPP00738 406 aa0.09□□□□□ -2.4
RNU6-54P-201ENST00000365563 ARL14EPLP0DKL9 152 aa0.09□□□□□ -2.4
RNU6-54P-201ENST00000365563 HARSP12081 509 aaKnown RBP0.09□□□□□ -2.4
RNU6-54P-201ENST00000365563 NPR1P16066 1061 aa0.09□□□□□ -2.4
RNU6-54P-201ENST00000365563 ZNF17P17021 662 aa0.09□□□□□ -2.4
RNU6-54P-201ENST00000365563 IGFBP2P18065 325 aa0.09□□□□□ -2.4
RNU6-54P-201ENST00000365563 AKAP5P24588 427 aa0.09□□□□□ -2.4
RNU6-54P-201ENST00000365563 DCTDP32321 178 aa0.09□□□□□ -2.4
RNU6-54P-201ENST00000365563 STX2P32856 288 aa0.09□□□□□ -2.4
RNU6-54P-201ENST00000365563 NR2C2P49116 596 aa0.09□□□□□ -2.4
RNU6-54P-201ENST00000365563 CARSP49589 748 aaKnown RBP0.09□□□□□ -2.4
RNU6-54P-201ENST00000365563 BRWD1-AS2P59051 145 aa0.09□□□□□ -2.4
RNU6-54P-201ENST00000365563 TLE3Q04726 772 aa0.09□□□□□ -2.4
RNU6-54P-201ENST00000365563 PAX8Q06710 450 aa0.09□□□□□ -2.4
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms