RNA–Protein interactions for RNA: ENST00000359759.8

COL18A1-203, Transcript of collagen type XVIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL18A1, Length 6,586 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-203ENST00000359759 FAM81AQ8TBF8 368 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 CCDC59Q9P031 241 aaKnown RBP16.13■□□□□ 0.17
COL18A1-203ENST00000359759 TELO2Q9Y4R8 837 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 ANKRD63C9JTQ0 380 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 MCIDASD6RGH6 385 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 APOC4-APOC2K7ER74 178 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 CHADO15335 359 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 APOC2P02655 101 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 IQSEC1Q6DN90 963 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 TOR3AQ9H497 397 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 STARD7Q9NQZ5 370 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 GLI2P10070 1586 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 SLC28A1O00337 649 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 POMZP3Q6PJE2 187 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 IL22Q9GZX6 179 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 CRB1P82279 1406 aa16.13■□□□□ 0.17
COL18A1-203ENST00000359759 AMD1P17707 334 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 RIPK1Q13546 671 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 SUZ12Q15022 739 aaKnown RBP16.12■□□□□ 0.17
COL18A1-203ENST00000359759 PARGQ86W56 976 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 OR52K2Q8NGK3 314 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 PNPT1Q8TCS8 783 aaKnown RBP16.12■□□□□ 0.17
COL18A1-203ENST00000359759 CXorf40AQ8TE69 158 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 BAP1Q92560 729 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 PGM2Q96G03 612 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 TDRD1Q9BXT4 1180 aaKnown RBP16.12■□□□□ 0.17
COL18A1-203ENST00000359759 MAPRE3Q9UPY8 281 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 DHRS12A0PJE2 317 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 ITGA2P17301 1181 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 PIK3R6Q5UE93 754 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 RAET1GQ6H3X3 334 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 SULT1C3Q6IMI6 304 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 WDR59Q6PJI9 974 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 ADGRG2Q8IZP9 1017 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 PANX1Q96RD7 426 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 COMMD3-BMI1R4GMX3 469 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 ASTN2O75129 1339 aaPredicted RBP16.12■□□□□ 0.17
COL18A1-203ENST00000359759 PTPN1P18031 435 aaKnown RBP16.12■□□□□ 0.17
COL18A1-203ENST00000359759 SWI5Q1ZZU3 235 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 EARS2Q5JPH6 523 aaKnown RBP16.12■□□□□ 0.17
COL18A1-203ENST00000359759 DEFB132Q7Z7B7 95 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.12■□□□□ 0.17
COL18A1-203ENST00000359759 SFRP1Q8N474 314 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 SAMD3Q8N6K7 520 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 CERS2Q96G23 380 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 QRFPRQ96P65 431 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 TPK1Q9H3S4 243 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 PNPOQ9NVS9 261 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.12■□□□□ 0.173e-7■■■□□ 16
COL18A1-203ENST00000359759 PFDN2Q9UHV9 154 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 ARHGEF33A8MVX0 844 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 PQBP1O60828 265 aaKnown RBP16.12■□□□□ 0.17
COL18A1-203ENST00000359759 SERPINA1P01009 418 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 EIF2S3P41091 472 aaKnown RBP16.12■□□□□ 0.17
COL18A1-203ENST00000359759 RPL5P46777 297 aaKnown RBP16.12■□□□□ 0.17
COL18A1-203ENST00000359759 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP16.12■□□□□ 0.17
COL18A1-203ENST00000359759 KATNAL2Q8IYT4 538 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 NOL11Q9H8H0 719 aaKnown RBP16.12■□□□□ 0.17
COL18A1-203ENST00000359759 MARCH7Q9H992 704 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 GIT1Q9Y2X7 761 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 A0A0X1KG70 313 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 SCN2BO60939 215 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 CTPS1P17812 591 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 S100GP29377 79 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 TTKP33981 857 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 CAPGP40121 348 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 NFIAQ12857 509 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 TRIM28Q13263 835 aaKnown RBP16.12■□□□□ 0.17
COL18A1-203ENST00000359759 NFE2Q16621 373 aaPredicted RBP16.12■□□□□ 0.17
COL18A1-203ENST00000359759 TBCBQ99426 244 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 RASSF1Q9NS23 344 aa16.12■□□□□ 0.17
COL18A1-203ENST00000359759 PGRMC2O15173 223 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 AVILO75366 819 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 ERAL1O75616 437 aaKnown RBP16.11■□□□□ 0.17
COL18A1-203ENST00000359759 AP2A2O94973 939 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 DPEP1P16444 411 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 SEMA5AQ13591 1074 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 AUHQ13825 339 aaKnown RBP16.11■□□□□ 0.17
COL18A1-203ENST00000359759 ALG11Q2TAA5 492 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 STK40Q8N2I9 435 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 CLHC1Q8NHS4 586 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 TCF12Q99081 682 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 DMTF1Q9Y222 760 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 CROCC2H7BZ55 1655 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 FAM172BPA6NC97 362 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 ERN1O75460 977 aaKnown RBP16.11■□□□□ 0.17
COL18A1-203ENST00000359759 ARF3P61204 181 aaPredicted RBP16.11■□□□□ 0.17
COL18A1-203ENST00000359759 ARF1P84077 181 aaKnown RBP16.11■□□□□ 0.17
COL18A1-203ENST00000359759 ATP13A4Q4VNC1 1196 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 C6orf52Q5T4I8 152 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 GK5Q6ZS86 529 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 TXNRD3Q86VQ6 643 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 OSBPL11Q9BXB4 747 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 ZNF180Q9UJW8 692 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 AP3M1Q9Y2T2 418 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 AK5Q9Y6K8 562 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 SERPINA4P29622 427 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 BACE1P56817 501 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 MOXD1Q6UVY6 613 aa16.11■□□□□ 0.17
COL18A1-203ENST00000359759 OR52E6Q96RD3 313 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms