RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 A0A0J9YYE9 177 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 SYCE1LA8MT33 242 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 M0QZ92 97 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 AURKAO14965 403 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 MAN1A2O60476 641 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 SIX3O95343 332 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-203ENST00000358528 CHEK2O96017 543 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 HGFP14210 728 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 ATP6V1B2P21281 511 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 GRIK1P39086 918 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 GRM5P41594 1212 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 DPP6P42658 865 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 GHRHRQ02643 423 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 PPP1R8Q12972 351 aaKnown RBP6.62□□□□□ -1.35
CSDE1-203ENST00000358528 SQLEQ14534 574 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 MAPK11Q15759 364 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 SGO1Q5FBB7 561 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 STEAP4Q687X5 459 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 CCDC81Q6ZN84 652 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 CNTD1Q8N815 330 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 PTGR2Q8N8N7 351 aaPredicted RBP6.62□□□□□ -1.35
CSDE1-203ENST00000358528 BPIFB6Q8NFQ5 453 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 RMDN1Q96DB5 314 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 FBXL20Q96IG2 436 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 HAPLN3Q96S86 360 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 TCF12Q99081 682 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 MRPL57Q9BQC6 102 aaKnown RBP6.62□□□□□ -1.35
CSDE1-203ENST00000358528 DUSP16Q9BY84 665 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 UNC93B1Q9H1C4 597 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 TXNRD2Q9NNW7 524 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 RGS18Q9NS28 235 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 GID8Q9NWU2 228 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 IGSF9Q9P2J2 1179 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 EBF1Q9UH73 591 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 CDC14AQ9UNH5 594 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 PHF24Q9UPV7 400 aa6.62□□□□□ -1.35
CSDE1-203ENST00000358528 GOLGA4Q13439 2230 aaKnown RBP6.62□□□□□ -1.35
CSDE1-203ENST00000358528 KIAA1217Q5T5P2 1943 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 IGKV6D-21A0A0A0MT36 114 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 A0A1W2PPW3 197 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 C7orf72A4D263 438 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 PRORSD1PA6NEY8 169 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 H3BMM5 538 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 ALDH1A2O94788 518 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 ZBTB11O95625 1053 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-203ENST00000358528 SLC25A27O95847 323 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 GSRP00390 522 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 PROZP22891 400 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 GLDCP23378 1020 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 HMOX2P30519 316 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 GEMP55040 296 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 BNIP3Q12983 259 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 ITGA7Q13683 1181 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 FRG1Q14331 258 aaKnown RBP6.61□□□□□ -1.35
CSDE1-203ENST00000358528 PRAMEF19Q5SWL8 479 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 STXBP5Q5T5C0 1151 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 PKN3Q6P5Z2 889 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 POTEHQ6S545 545 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 TMEM26Q6ZUK4 368 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 ERO1BQ86YB8 467 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 MIB1Q86YT6 1006 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 CAMK1DQ8IU85 385 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 TMCO5AQ8N6Q1 288 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 NPWQ8N729 165 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 CDC26Q8NHZ8 85 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 GFM2Q969S9 779 aaKnown RBP6.61□□□□□ -1.35
CSDE1-203ENST00000358528 VPS33AQ96AX1 596 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 SENP8Q96LD8 212 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 KCTD14Q9BQ13 255 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-203ENST00000358528 MLPHQ9BV36 600 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-203ENST00000358528 COLEC11Q9BWP8 271 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 NACA2Q9H009 215 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 GBA3Q9H227 469 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 CXorf21Q9HAI6 301 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 SPON1Q9HCB6 807 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 SELENONQ9NZV5 590 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 FADS3Q9Y5Q0 445 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 DGKBQ9Y6T7 804 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 AHDC1Q5TGY3 1603 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-203ENST00000358528 ZCWPW2A0A1B0GU75 182 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 MYBPHLA2RUH7 354 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 PLOD2O00469 737 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 SDHDO14521 159 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 DENRO43583 198 aaKnown RBP6.61□□□□□ -1.35
CSDE1-203ENST00000358528 SNX2O60749 519 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 DAB1O75553 588 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 GABBR2O75899 941 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 B3GAT3O94766 335 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 RBP1P09455 135 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 GNAO1P09471 354 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 LTA4HP09960 611 aaKnown RBP6.61□□□□□ -1.35
CSDE1-203ENST00000358528 SLC35E2BP0CK96 405 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 CDH2P19022 906 aaPredicted RBP6.61□□□□□ -1.35
CSDE1-203ENST00000358528 RPS12P25398 132 aaKnown RBP6.61□□□□□ -1.35
CSDE1-203ENST00000358528 GLUD2P49448 558 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 TMED10P49755 219 aaKnown RBP6.61□□□□□ -1.35
CSDE1-203ENST00000358528 NDST2P52849 883 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 OCA2Q04671 838 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 IMPG1Q17R60 797 aa6.61□□□□□ -1.35
CSDE1-203ENST00000358528 TRIM16LQ309B1 348 aa6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms