RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 A0A1W2PQ72 361 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 OPLAHO14841 1288 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 AXIN1O15169 862 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 IFNGP01579 166 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 SP100P23497 879 aaPredicted RBP12.93□□□□□ -0.34
SMC4-202ENST00000357388 ARFIP1P53367 373 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 PEX6Q13608 980 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 HELQQ8TDG4 1101 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 KAT5Q92993 513 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 HMX1Q9NP08 348 aaPredicted RBP12.93□□□□□ -0.34
SMC4-202ENST00000357388 TRPV5Q9NQA5 729 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 ETNK2Q9NVF9 386 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 DDX43Q9NXZ2 648 aaKnown RBP12.93□□□□□ -0.34
SMC4-202ENST00000357388 FADS3Q9Y5Q0 445 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 USP31Q70CQ4 1352 aa12.93□□□□□ -0.34
SMC4-202ENST00000357388 TSPAN4O14817 238 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 CABYRO75952 493 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 APOL3O95236 402 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 VTNP04004 478 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 PRKAR2AP13861 404 aaKnown RBP12.92□□□□□ -0.34
SMC4-202ENST00000357388 CLK3P49761 638 aaKnown RBP12.92□□□□□ -0.34
SMC4-202ENST00000357388 PRKG2Q13237 762 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 ACOX1Q15067 660 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 FNDC3BQ53EP0 1204 aaKnown RBP12.92□□□□□ -0.34
SMC4-202ENST00000357388 PTCHD4Q6ZW05 846 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 ZNF720Q7Z2F6 126 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 C12orf56Q8IXR9 622 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 SENP6Q9GZR1 1112 aaPredicted RBP12.92□□□□□ -0.34
SMC4-202ENST00000357388 ZSCAN5CA6NGD5 496 aaPredicted RBP12.92□□□□□ -0.34
SMC4-202ENST00000357388 TFECO14948 347 aaPredicted RBP12.92□□□□□ -0.34
SMC4-202ENST00000357388 NDUFS2O75306 463 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 ANXA5P08758 320 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 TIE1P35590 1138 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 MNDAP41218 407 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 HNF4AP41235 474 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 ELP6Q0PNE2 266 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 IL18Q14116 193 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 R3HCC1LQ7Z5L2 792 aaKnown RBP12.92□□□□□ -0.34
SMC4-202ENST00000357388 TXNRD3Q86VQ6 643 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 BSNDQ8WZ55 320 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 RBM4BQ9BQ04 359 aaKnown RBP12.92□□□□□ -0.34
SMC4-202ENST00000357388 RBM4Q9BWF3 364 aaKnown RBP12.92□□□□□ -0.34
SMC4-202ENST00000357388 MKLN1Q9UL63 735 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 CNTNAP2Q9UHC6 1331 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 CHURC1-FNTBB4DL54 471 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 PQBP1O60828 265 aaKnown RBP12.92□□□□□ -0.34
SMC4-202ENST00000357388 SERPINB7O75635 380 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 PCSK2P16519 638 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 NPTX2P47972 431 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 RBBP4Q09028 425 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 ZNHIT3Q15649 155 aaPredicted RBP12.92□□□□□ -0.34
SMC4-202ENST00000357388 PIK3R6Q5UE93 754 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 SLC9A4Q6AI14 798 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 RGL4Q8IZJ4 473 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 SMARCD1Q96GM5 515 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 ELOVL4Q9GZR5 314 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 IFT80Q9P2H3 777 aaPredicted RBP12.92□□□□□ -0.34
SMC4-202ENST00000357388 TAF6LQ9Y6J9 622 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 PRODHO43272 600 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 SCGNO76038 276 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 ITGB6P18564 788 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 SPIBQ01892 262 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 LIPMQ5VYY2 423 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 GPALPP1Q8IXQ4 340 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 C4orf19Q8IY42 314 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 PIH1D2Q8WWB5 315 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 SMURF2Q9HAU4 748 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 RASSF1Q9NS23 344 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 CATSPERZQ9NTU4 200 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 ZMYM5Q9UJ78 669 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 DNPEPQ9ULA0 475 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 EDF1O60869 148 aaKnown RBP12.92□□□□□ -0.34
SMC4-202ENST00000357388 DNAJA2O60884 412 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 MAP3K6O95382 1288 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 IFNA6P05013 189 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 ZNF806P0C7X5 589 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 PRDX6P30041 224 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 RPL22P35268 128 aaKnown RBP12.92□□□□□ -0.34
SMC4-202ENST00000357388 BST1Q10588 318 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 CRY1Q16526 586 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 SELENOMQ8WWX9 145 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 SEMA4DQ92854 862 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 GMCL1Q96IK5 515 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 C12orf66Q96MD2 445 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 ZDHHC15Q96MV8 337 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 BARX2Q9UMQ3 279 aaPredicted RBP12.92□□□□□ -0.34
SMC4-202ENST00000357388 PMF1-BGLAPU3KQ54 211 aa12.92□□□□□ -0.34
SMC4-202ENST00000357388 AP3D1O14617 1153 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 MSCO60682 206 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 ERCC2P18074 760 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 SREBF1P36956 1147 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 TRIM40Q6P9F5 258 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 TUBGCP5Q96RT8 1024 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 ZNF607Q96SK3 696 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 TRMOQ9BU70 441 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 CDH19Q9H159 772 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 DHX33Q9H6R0 707 aaKnown RBP12.91□□□□□ -0.34
SMC4-202ENST00000357388 MED11Q9P086 117 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 RLN1P04808 185 aa12.91□□□□□ -0.34
SMC4-202ENST00000357388 GPR1P46091 355 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms