RNA–Protein interactions for RNA: ENST00000357276.8

SMARCAL1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SMARCAL1, Length 3,271 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-201ENST00000357276 IFRD2Q12894 506 aaPredicted RBP12.21□□□□□ -0.46
SMARCAL1-201ENST00000357276 SOWAHAQ2M3V2 549 aa12.21□□□□□ -0.46
SMARCAL1-201ENST00000357276 AGKQ53H12 422 aa12.21□□□□□ -0.46
SMARCAL1-201ENST00000357276 GTF2IRD2BQ6EKJ0 949 aa12.21□□□□□ -0.46
SMARCAL1-201ENST00000357276 CYHR1Q6ZMK1 362 aa12.21□□□□□ -0.46
SMARCAL1-201ENST00000357276 BNIPLQ7Z465 357 aa12.21□□□□□ -0.46
SMARCAL1-201ENST00000357276 GTF2IRD2Q86UP8 949 aa12.21□□□□□ -0.46
SMARCAL1-201ENST00000357276 CNTN4Q8IWV2 1026 aa12.21□□□□□ -0.46
SMARCAL1-201ENST00000357276 RHOBTB2Q9BYZ6 727 aa12.21□□□□□ -0.46
SMARCAL1-201ENST00000357276 PRDM12Q9H4Q4 367 aa12.21□□□□□ -0.46
SMARCAL1-201ENST00000357276 TNFRSF12AQ9NP84 129 aa12.21□□□□□ -0.46
SMARCAL1-201ENST00000357276 IARS2Q9NSE4 1012 aaKnown RBP12.21□□□□□ -0.46
SMARCAL1-201ENST00000357276 NME7Q9Y5B8 376 aa12.21□□□□□ -0.46
SMARCAL1-201ENST00000357276 PLXNA1Q9UIW2 1896 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 ERI2A8K979 691 aaKnown RBP12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 GOLGA8TH3BQL2 631 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 WNT10BO00744 389 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 NME4O00746 187 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 UBDO15205 165 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 CNOT3O75175 753 aaKnown RBP12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 ARSAP15289 507 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 CYP2B6P20813 491 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 PTPN3P26045 913 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 TMED10P49755 219 aaKnown RBP12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 PGGT1BP53609 377 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 TNFAIP1Q13829 316 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 DEPDC1Q5TB30 811 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 XAF1Q6GPH4 301 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 CCDC80Q76M96 950 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 FUNDC1Q8IVP5 155 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 MFSD6LQ8IWD5 586 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 ADGRG5Q8IZF4 528 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 CLEC4CQ8WTT0 213 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 MLPHQ9BV36 600 aaPredicted RBP12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 RMI1Q9H9A7 625 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 CCDC167Q9P0B6 97 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 GIT1Q9Y2X7 761 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 CPQQ9Y646 472 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 DHRS12A0PJE2 317 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 USP12O75317 370 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 MBL2P11226 248 aaPredicted RBP12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 LRPAP1P30533 357 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 ARL4AP40617 200 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 NPY2RP49146 381 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 PPP1R3AQ16821 1122 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 TBCELQ5QJ74 424 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 CERCAMQ5T4B2 595 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 TMTC4Q5T4D3 741 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 RETREG3Q86VR2 466 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 C7orf31Q8N865 590 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 PAPD5Q8NDF8 572 aaKnown RBP12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 ALPK1Q96QP1 1244 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 CSF3RQ99062 836 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 ASB7Q9H672 318 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 CHRAC1Q9NRG0 131 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 ATAD3AQ9NVI7 634 aa12.2□□□□□ -0.46
SMARCAL1-201ENST00000357276 CLOCKO15516 846 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 CLIC3O95833 236 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 STAT5BP51692 787 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 MBTD1Q05BQ5 628 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 GALNT1Q10472 559 aaPredicted RBP12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 TRAF2Q12933 501 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 CCNYL2Q5T2Q4 361 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 ZNF773Q6PK81 442 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 CDR2LQ86X02 465 aaPredicted RBP12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 KLHDC8BQ8IXV7 354 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 USP33Q8TEY7 942 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 ZNF347Q96SE7 839 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 MRPL46Q9H2W6 279 aaKnown RBP12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 SEPT3Q9UH03 358 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 PSME2Q9UL46 239 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 OAZ3Q9UMX2 235 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 ACOT9Q9Y305 439 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 MTF2Q9Y483 593 aaPredicted RBP12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 H0Y858 1186 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 MYL3P08590 195 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 IQCF3P0C7M6 154 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 UBA1P22314 1058 aaKnown RBP12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 FASP25445 335 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 GNA12Q03113 381 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 NME3Q13232 169 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 USP10Q14694 798 aaKnown RBP12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 GALNT18Q6P9A2 607 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 LARP4Q71RC2 724 aaKnown RBP eCLIP12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 CEP97Q8IW35 865 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 NETO2Q8NC67 525 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 NLGN2Q8NFZ4 835 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 RAB2BQ8WUD1 216 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 TAMM41Q96BW9 452 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 EFHD2Q96C19 240 aaPredicted RBP12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 SCYL1Q96KG9 808 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 CGREF1Q99674 301 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 KIFC1Q9BW19 673 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 TLR9Q9NR96 1032 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 FAM49BQ9NUQ9 324 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 SMPD3Q9NY59 655 aaPredicted RBP12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 MAP10Q9P2G4 905 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 DNMT3BQ9UBC3 853 aaKnown RBP12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 BBIP1A8MTZ0 92 aa12.19□□□□□ -0.46
SMARCAL1-201ENST00000357276 KPNA4O00629 521 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms