RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 SPATC1LQ9H0A9 340 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 SNX25Q9H3E2 840 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 SMARCAD1Q9H4L7 1026 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 GOLGA2P5Q9HBQ8 144 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 ERGIC3Q9Y282 383 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 ATP11BQ9Y2G3 1177 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 SNX10Q9Y5X0 201 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 TLL2Q9Y6L7 1015 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 WDR81Q562E7 1941 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 FAM149AA5PLN7 773 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 GRID2O43424 1007 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 HBP1O60381 514 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 TIPRLO75663 272 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 DDHD2O94830 711 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 MPOP05164 745 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 TGFB3P10600 412 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 ERCC2P18074 760 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 NFKB1P19838 968 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 PRKACBP22694 351 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 GNL1P36915 607 aaPredicted RBP8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 PTPN9P43378 593 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 MAPK10P53779 464 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 PSME3P61289 254 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 MPP1Q00013 466 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 PRPSAP1Q14558 356 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 MOGQ16653 247 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 MGAT5BQ3V5L5 792 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 USP43Q70EL4 1123 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 CYS1Q717R9 158 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 SLC26A9Q7LBE3 791 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 PIGZQ86VD9 579 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 PSTKQ8IV42 348 aaKnown RBP8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 ZNF786Q8N393 782 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 FAM47BQ8NA70 645 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 TBC1D15Q8TC07 691 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 EXT2Q93063 718 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 FTHL17Q9BXU8 183 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 HIPK3Q9H422 1215 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 LRRC4Q9HBW1 653 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 ZFYVE28Q9HCC9 887 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 ZBTB26Q9HCK0 441 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 MRGBPQ9NV56 204 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 GMPR2Q9P2T1 348 aaKnown RBP8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 PCDHGA3Q9Y5H0 932 aa8.31□□□□□ -1.08
CDC42SE1-201ENST00000357235 EVPLQ92817 2033 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 IGKV6-21A0A0C4DH24 114 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 ZCWPW2A0A1B0GU75 182 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 ZNF839A8K0R7 811 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 HACD1B0YJ81 288 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 GIPC1O14908 333 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 CLASP2O75122 1294 aaKnown RBP8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 GMNNO75496 209 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 PTPN3P26045 913 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 MATKP42679 507 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 BMXP51813 675 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 BCAT1P54687 386 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 SLC12A2P55011 1212 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 CSE1LP55060 971 aaKnown RBP8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 TPI1P60174 286 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 TSPY1Q01534 308 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 ARHGEF6Q15052 776 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 PPP1R3AQ16821 1122 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 ANO4Q32M45 955 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 ZBTB49Q6ZSB9 765 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 FRA10AC1Q70Z53 315 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 HERC6Q8IVU3 1022 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 SIX6OS1Q8N1H7 587 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 OR9I1Q8NGQ6 314 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 SPATA22Q8NHS9 363 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 LPGAT1Q92604 370 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 ELMO2Q96JJ3 720 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 SLC29A1Q99808 456 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 MED10Q9BTT4 135 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 ERAP1Q9NZ08 941 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 MOSPD1Q9UJG1 213 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 CDH7Q9ULB5 785 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 FZD10Q9ULW2 581 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 DLX3O60479 287 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 BCAS2O75934 225 aaPredicted RBP8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 H6PDO95479 791 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 CLIC3O95833 236 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 HNRNPFP52597 415 aaKnown RBP8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 CSHL1Q14406 222 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 TMTC4Q5T4D3 741 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 HFE2Q6ZVN8 426 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 OTOP3Q7RTS5 596 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 NT5DC4Q86YG4 428 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 ANKRD52Q8NB46 1076 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 IPMKQ8NFU5 416 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 RNF34Q969K3 372 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 RMND5BQ96G75 393 aaPredicted RBP8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 MED30Q96HR3 178 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 POMKQ9H5K3 350 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 PIGVQ9NUD9 493 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 DAPK2Q9UIK4 370 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 ACOT9Q9Y305 439 aa8.3□□□□□ -1.08
CDC42SE1-201ENST00000357235 RNF103-CHMP3A0A140T963 221 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 LOC105371267A0A1B0GV96 52 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 TCAF2A6NFQ2 919 aa8.29□□□□□ -1.08
CDC42SE1-201ENST00000357235 ZNF701M0R085 212 aaPredicted RBP8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms