RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 UBFD1O14562 309 aaKnown RBP10.21□□□□□ -0.78
PTPRA-203ENST00000356147 EI24O14681 340 aa10.21□□□□□ -0.78
PTPRA-203ENST00000356147 H2AFYO75367 372 aaKnown RBP10.21□□□□□ -0.78
PTPRA-203ENST00000356147 CAPNS1P04632 268 aa10.21□□□□□ -0.78
PTPRA-203ENST00000356147 USP17L7P0C7H9 530 aa10.21□□□□□ -0.78
PTPRA-203ENST00000356147 UGT1A1P22309 533 aa10.21□□□□□ -0.78
PTPRA-203ENST00000356147 UGT1A4P22310 534 aa10.21□□□□□ -0.78
PTPRA-203ENST00000356147 ARNTP27540 789 aa10.21□□□□□ -0.78
PTPRA-203ENST00000356147 UGT1A3P35503 534 aa10.21□□□□□ -0.78
PTPRA-203ENST00000356147 UGT1A5P35504 534 aa10.21□□□□□ -0.78
PTPRA-203ENST00000356147 TKTL1P51854 596 aa10.21□□□□□ -0.78
PTPRA-203ENST00000356147 TRAF2Q12933 501 aa10.21□□□□□ -0.78
PTPRA-203ENST00000356147 RFTN1Q14699 578 aaPredicted RBP10.21□□□□□ -0.78
PTPRA-203ENST00000356147 HERC3Q15034 1050 aa10.21□□□□□ -0.78
PTPRA-203ENST00000356147 OSTM1Q86WC4 334 aa10.21□□□□□ -0.78
PTPRA-203ENST00000356147 FUNDC1Q8IVP5 155 aa10.21□□□□□ -0.78
PTPRA-203ENST00000356147 SIX6OS1Q8N1H7 587 aa10.21□□□□□ -0.78
PTPRA-203ENST00000356147 PELI3Q8N2H9 469 aa10.21□□□□□ -0.78
PTPRA-203ENST00000356147 MAGEE2Q8TD90 523 aaPredicted RBP10.21□□□□□ -0.78
PTPRA-203ENST00000356147 SGCDQ92629 289 aa10.21□□□□□ -0.78
PTPRA-203ENST00000356147 PBXIP1Q96AQ6 731 aa10.21□□□□□ -0.78
PTPRA-203ENST00000356147 KLRG1Q96E93 195 aa10.21□□□□□ -0.78
PTPRA-203ENST00000356147 C12orf42Q96LP6 360 aa10.21□□□□□ -0.78
PTPRA-203ENST00000356147 ANKRD60Q9BZ19 345 aa10.21□□□□□ -0.78
PTPRA-203ENST00000356147 ULBP1Q9BZM6 244 aa10.21□□□□□ -0.78
PTPRA-203ENST00000356147 GBA3Q9H227 469 aa10.21□□□□□ -0.78
PTPRA-203ENST00000356147 EVLQ9UI08 416 aaPredicted RBP10.21□□□□□ -0.78
PTPRA-203ENST00000356147 MID2Q9UJV3 735 aa10.21□□□□□ -0.78
PTPRA-203ENST00000356147 SLC8A2Q9UPR5 921 aa10.21□□□□□ -0.78
PTPRA-203ENST00000356147 PARP14Q460N5 1801 aa10.21□□□□□ -0.78
PTPRA-203ENST00000356147 BRCA2P51587 3418 aa10.21□□□□□ -0.78
PTPRA-203ENST00000356147 TCRBV3S1A0A5B6 114 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 TTC24A2A3L6 582 aaPredicted RBP10.2□□□□□ -0.78
PTPRA-203ENST00000356147 H3BMQ9 156 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 RECQL4O94761 1208 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 SLC4A1P02730 911 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 APOA4P06727 396 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 YBX3P16989 372 aaKnown RBP eCLIP10.2□□□□□ -0.783e-7■■□□□ 13.1
PTPRA-203ENST00000356147 BDNFP23560 247 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 EEF1B2P24534 225 aaKnown RBP10.2□□□□□ -0.78
PTPRA-203ENST00000356147 NOS2P35228 1153 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 KCNC1P48547 511 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 RAB39AQ14964 217 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 PAFAH1B3Q15102 231 aaKnown RBP10.2□□□□□ -0.78
PTPRA-203ENST00000356147 C9orf57Q5W0N0 161 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 Q6ZNX1 250 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 GPRIN1Q7Z2K8 1008 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 ZDHHC17Q8IUH5 632 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 ANKRD49Q8WVL7 239 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 COG8Q96MW5 612 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 KCNA7Q96RP8 456 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 NPY6RQ99463 290 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 SEPHS2Q99611 448 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 RHOBTB2Q9BYZ6 727 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 LTB4R2Q9NPC1 389 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 ERAP1Q9NZ08 941 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 PADI4Q9UM07 663 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 CORINQ9Y5Q5 1042 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 TRPC5OSA6NMA1 111 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 A8MT66 165 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 ZNF487B1APH4 448 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 INPP4BO15327 924 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 FYNP06241 537 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 ALDOCP09972 364 aaKnown RBP10.2□□□□□ -0.78
PTPRA-203ENST00000356147 SNX16P57768 344 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 TNK2Q07912 1038 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 CDH17Q12864 832 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 TGFBIQ15582 683 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 FBXO47Q5MNV8 452 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 OTUD3Q5T2D3 398 aaPredicted RBP10.2□□□□□ -0.78
PTPRA-203ENST00000356147 NANOGP8Q6NSW7 305 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 C16orf87Q6PH81 154 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 PIM3Q86V86 326 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 SNX29P2Q8IUI4 249 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 CMTR2Q8IYT2 770 aaKnown RBP10.2□□□□□ -0.78
PTPRA-203ENST00000356147 DNAJB14Q8TBM8 379 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 TRPM4Q8TD43 1214 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 AFG1LQ8WV93 481 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 WNT8BQ93098 351 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 TCF12Q99081 682 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 MCMBPQ9BTE3 642 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 EFHD1Q9BUP0 239 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 NPLQ9BXD5 320 aaPredicted RBP10.2□□□□□ -0.78
PTPRA-203ENST00000356147 BRD8Q9H0E9 1235 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 UPF3AQ9H1J1 476 aaKnown RBP10.2□□□□□ -0.78
PTPRA-203ENST00000356147 ALG9Q9H6U8 611 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 RPF2Q9H7B2 306 aaKnown RBP10.2□□□□□ -0.78
PTPRA-203ENST00000356147 CD300AQ9UGN4 299 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 A0A087WXM4 84 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 SLCO1B7G3V0H7 640 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 K7EPI3 171 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 CLOCKO15516 846 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 SIX3O95343 332 aaPredicted RBP10.2□□□□□ -0.78
PTPRA-203ENST00000356147 FUCA1P04066 466 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 LGALS2P05162 132 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 NUP107P57740 925 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 PLIN5Q00G26 463 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 SOX4Q06945 474 aaPredicted RBP10.2□□□□□ -0.78
PTPRA-203ENST00000356147 MERTKQ12866 999 aa10.2□□□□□ -0.78
PTPRA-203ENST00000356147 PLA2G4EQ3MJ16 856 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms