RNA–Protein interactions for RNA: ENST00000354534.10

SCN8A-201, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCN8A, Length 11,556 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-201ENST00000354534 JAZF1Q86VZ6 243 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 NOA1Q8NC60 698 aaKnown RBP8.08□□□□□ -1.12
SCN8A-201ENST00000354534 ATG4AQ8WYN0 398 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 ZNF512BQ96KM6 892 aaPredicted RBP8.08□□□□□ -1.12
SCN8A-201ENST00000354534 PI4K2AQ9BTU6 479 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 CBX6O95503 412 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 VARSP26640 1264 aaKnown RBP8.08□□□□□ -1.12
SCN8A-201ENST00000354534 PRKCDQ05655 676 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 SFRP1Q8N474 314 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 CPT1CQ8TCG5 803 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 SH3RF3Q8TEJ3 882 aaPredicted RBP8.08□□□□□ -1.12
SCN8A-201ENST00000354534 CBWD1Q9BRT8 395 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 CDC42EP4Q9H3Q1 356 aaKnown RBP8.08□□□□□ -1.12
SCN8A-201ENST00000354534 PCDHGB3Q9Y5G1 929 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 RPA1P27694 616 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 MARSP56192 900 aaKnown RBP8.08□□□□□ -1.12
SCN8A-201ENST00000354534 DLG4P78352 724 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 AARDQ4LEZ3 155 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 KCNV1Q6PIU1 500 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 POMZP3Q6PJE2 187 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 JPH1Q9HDC5 661 aaPredicted RBP8.08□□□□□ -1.12
SCN8A-201ENST00000354534 SLC38A7Q9NVC3 462 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 YARS2Q9Y2Z4 477 aaKnown RBP8.08□□□□□ -1.12
SCN8A-201ENST00000354534 OR10H1Q9Y4A9 318 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 KIF28PB7ZC32 967 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 NMT1P30419 496 aaKnown RBP8.08□□□□□ -1.12
SCN8A-201ENST00000354534 IL6STP40189 918 aaPredicted RBP8.08□□□□□ -1.12
SCN8A-201ENST00000354534 SNRPFP62306 86 aaKnown RBP8.08□□□□□ -1.12
SCN8A-201ENST00000354534 ITGA7Q13683 1181 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 GRM4Q14833 912 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 ZCCHC23Q6ZST2 131 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 BEND5Q7L4P6 421 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 CACUL1Q86Y37 369 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 OXR1Q8N573 874 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 GALNT11Q8NCW6 608 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 NXPE2Q96DL1 559 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 NARFQ9UHQ1 456 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 MRPL42Q9Y6G3 142 aaKnown RBP8.08□□□□□ -1.12
SCN8A-201ENST00000354534 RP1L1Q8IWN7 2480 aaPredicted RBP8.08□□□□□ -1.12
SCN8A-201ENST00000354534 PER1O15534 1290 aaPredicted RBP8.08□□□□□ -1.12
SCN8A-201ENST00000354534 PGRP06401 933 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 HNF4AP41235 474 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 USP11P51784 963 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 FAM83HQ6ZRV2 1179 aaPredicted RBP8.08□□□□□ -1.12
SCN8A-201ENST00000354534 GPSM1Q86YR5 675 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 AADATQ8N5Z0 425 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 SYN2Q92777 582 aaPredicted RBP8.08□□□□□ -1.12
SCN8A-201ENST00000354534 PNPLA3Q9NST1 481 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 SOHLH2Q9NX45 425 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP8.08□□□□□ -1.12
SCN8A-201ENST00000354534 PSME2Q9UL46 239 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 CPSF4LA6NMK7 179 aaKnown RBP8.08□□□□□ -1.12
SCN8A-201ENST00000354534 PP2D1A8MPX8 630 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 XKRYO14609 159 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 TSPAN3O60637 253 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 SLC2A3P11169 496 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 CSTF1Q05048 431 aaKnown RBP8.08□□□□□ -1.12
SCN8A-201ENST00000354534 MOGSQ13724 837 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 SPIN3Q5JUX0 258 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 FAM92BQ6ZTR7 304 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 SNX20Q7Z614 316 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 TPCN2Q8NHX9 752 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 EZH1Q92800 747 aaPredicted RBP8.08□□□□□ -1.12
SCN8A-201ENST00000354534 CRYL1Q9Y2S2 319 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 IFT52Q9Y366 437 aa8.08□□□□□ -1.12
SCN8A-201ENST00000354534 SLC28A2O43868 658 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 FESP07332 822 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 ANPEPP15144 967 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 RPL5P46777 297 aaKnown RBP8.07□□□□□ -1.12
SCN8A-201ENST00000354534 PAN2Q504Q3 1202 aaKnown RBP8.07□□□□□ -1.12
SCN8A-201ENST00000354534 UBXN11Q5T124 520 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 ARPINQ7Z6K5 226 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 NXNL1Q96CM4 212 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 RGCCQ9H4X1 137 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 AP3M1Q9Y2T2 418 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 FKBP7Q9Y680 259 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 U3KQV3 271 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 SMAD9O15198 467 aaKnown RBP8.07□□□□□ -1.12
SCN8A-201ENST00000354534 SCN2BO60939 215 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 CYP2C9P11712 490 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 TLE2Q04725 743 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 BNIP1Q12981 228 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 ARMC5Q96C12 935 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 B3GNT4Q9C0J1 378 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 TRPV4Q9HBA0 871 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 GIN1Q9NXP7 522 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 NPIPA7E9PJI5 369 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 NPIPA8P0DM63 369 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 AZGP1P25311 298 aaKnown RBP8.07□□□□□ -1.12
SCN8A-201ENST00000354534 RNF151Q2KHN1 245 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 KLHL26Q53HC5 615 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 EIF5AL1Q6IS14 154 aaKnown RBP8.07□□□□□ -1.12
SCN8A-201ENST00000354534 TPGS1Q6ZTW0 290 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 SLFN11Q7Z7L1 901 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 TMED9Q9BVK6 235 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 MAGEE1Q9HCI5 957 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 E9PAM4 449 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 ANXA5P08758 320 aa8.07□□□□□ -1.12
SCN8A-201ENST00000354534 CRKLP46109 303 aaKnown RBP8.07□□□□□ -1.12
SCN8A-201ENST00000354534 CHAF1BQ13112 559 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms