RNA–Protein interactions for RNA: ENST00000354241.5

TRIM4-202, Transcript of tripartite motif containing 4, humanhuman

TSL 1 (best) BASIC

Gene TRIM4, Length 1,942 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-202ENST00000354241 IGSF6O95976 241 aa20.69■□□□□ 0.9
TRIM4-202ENST00000354241 PDHA1P08559 390 aa20.69■□□□□ 0.9
TRIM4-202ENST00000354241 ALADP13716 330 aa20.69■□□□□ 0.9
TRIM4-202ENST00000354241 KRT4P19013 534 aa20.69■□□□□ 0.9
TRIM4-202ENST00000354241 CA4P22748 312 aa20.69■□□□□ 0.9
TRIM4-202ENST00000354241 SULT2A1Q06520 285 aa20.69■□□□□ 0.9
TRIM4-202ENST00000354241 TERF2Q15554 542 aa20.69■□□□□ 0.9
TRIM4-202ENST00000354241 CNGA3Q16281 694 aa20.69■□□□□ 0.9
TRIM4-202ENST00000354241 TEDDM1Q5T9Z0 273 aa20.69■□□□□ 0.9
TRIM4-202ENST00000354241 ARMC3Q5W041 872 aa20.69■□□□□ 0.9
TRIM4-202ENST00000354241 ADIPOR2Q86V24 386 aa20.69■□□□□ 0.9
TRIM4-202ENST00000354241 AHI1Q8N157 1196 aa20.69■□□□□ 0.9
TRIM4-202ENST00000354241 RYBPQ8N488 228 aaPredicted RBP20.69■□□□□ 0.9
TRIM4-202ENST00000354241 ANKRD42Q8N9B4 389 aa20.69■□□□□ 0.9
TRIM4-202ENST00000354241 THG1LQ9NWX6 298 aaKnown RBP20.69■□□□□ 0.9
TRIM4-202ENST00000354241 LMCD1Q9NZU5 365 aa20.69■□□□□ 0.9
TRIM4-202ENST00000354241 HS3ST2Q9Y278 367 aa20.69■□□□□ 0.9
TRIM4-202ENST00000354241 CXorf51AA0A1B0GTR3 108 aa20.68■□□□□ 0.9
TRIM4-202ENST00000354241 GOLGA8RI6L899 631 aa20.68■□□□□ 0.9
TRIM4-202ENST00000354241 HOXC11O43248 304 aaPredicted RBP20.68■□□□□ 0.9
TRIM4-202ENST00000354241 PRLP01236 227 aa20.68■□□□□ 0.9
TRIM4-202ENST00000354241 POLR2EP19388 210 aaKnown RBP20.68■□□□□ 0.9
TRIM4-202ENST00000354241 ECT2LQ008S8 904 aa20.68■□□□□ 0.9
TRIM4-202ENST00000354241 ACCSLQ4AC99 568 aa20.68■□□□□ 0.9
TRIM4-202ENST00000354241 DGKKQ5KSL6 1271 aa20.68■□□□□ 0.9
TRIM4-202ENST00000354241 MROH9Q5TGP6 573 aa20.68■□□□□ 0.9
TRIM4-202ENST00000354241 MBLAC2Q68D91 279 aa20.68■□□□□ 0.9
TRIM4-202ENST00000354241 MGARPQ8TDB4 240 aa20.68■□□□□ 0.9
TRIM4-202ENST00000354241 ATP2A3Q93084 1043 aa20.68■□□□□ 0.9
TRIM4-202ENST00000354241 MYADMQ96S97 322 aa20.68■□□□□ 0.9
TRIM4-202ENST00000354241 CPNE1Q99829 537 aa20.68■□□□□ 0.9
TRIM4-202ENST00000354241 ADGRE3Q9BY15 652 aa20.68■□□□□ 0.9
TRIM4-202ENST00000354241 S1PR5Q9H228 398 aa20.68■□□□□ 0.9
TRIM4-202ENST00000354241 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP20.68■□□□□ 0.9
TRIM4-202ENST00000354241 GP5P40197 560 aa20.68■□□□□ 0.9
TRIM4-202ENST00000354241 DGKGP49619 791 aa20.68■□□□□ 0.9
TRIM4-202ENST00000354241 GEN1Q17RS7 908 aa20.68■□□□□ 0.9
TRIM4-202ENST00000354241 KIAA0930Q6ICG6 404 aaPredicted RBP20.68■□□□□ 0.9
TRIM4-202ENST00000354241 C22orf39Q6P5X5 142 aa20.68■□□□□ 0.9
TRIM4-202ENST00000354241 VITQ6UXI7 678 aa20.68■□□□□ 0.9
TRIM4-202ENST00000354241 STRA8Q7Z7C7 330 aa20.68■□□□□ 0.9
TRIM4-202ENST00000354241 DDX51Q8N8A6 666 aaKnown RBP eCLIP20.68■□□□□ 0.9
TRIM4-202ENST00000354241 MTBPQ96DY7 904 aa20.68■□□□□ 0.9
TRIM4-202ENST00000354241 SERAC1Q96JX3 654 aa20.68■□□□□ 0.9
TRIM4-202ENST00000354241 KIF26AQ9ULI4 1882 aaPredicted RBP20.68■□□□□ 0.9
TRIM4-202ENST00000354241 BNIP3LO60238 219 aa20.67■□□□□ 0.9
TRIM4-202ENST00000354241 ZNF821O75541 412 aaPredicted RBP20.67■□□□□ 0.9
TRIM4-202ENST00000354241 F7P08709 466 aaPredicted RBP20.67■□□□□ 0.9
TRIM4-202ENST00000354241 ARCN1P48444 511 aaKnown RBP20.67■□□□□ 0.9
TRIM4-202ENST00000354241 CSNK1DP48730 415 aa20.67■□□□□ 0.9
TRIM4-202ENST00000354241 TMEM215Q68D42 235 aa20.67■□□□□ 0.9
TRIM4-202ENST00000354241 KIAA0907Q7Z7F0 614 aaPredicted RBP20.67■□□□□ 0.9
TRIM4-202ENST00000354241 C12orf40Q86WS4 652 aa20.67■□□□□ 0.9
TRIM4-202ENST00000354241 OR2AP1Q8NGE2 309 aa20.67■□□□□ 0.9
TRIM4-202ENST00000354241 BRSK1Q8TDC3 778 aa20.67■□□□□ 0.9
TRIM4-202ENST00000354241 MYLIPQ8WY64 445 aa20.67■□□□□ 0.9
TRIM4-202ENST00000354241 INTS9Q9NV88 658 aaKnown RBP20.67■□□□□ 0.9
TRIM4-202ENST00000354241 PSD3Q9NYI0 1048 aa20.67■□□□□ 0.9
TRIM4-202ENST00000354241 FBXO10Q9UK96 956 aa20.67■□□□□ 0.9
TRIM4-202ENST00000354241 KCTD3Q9Y597 815 aa20.67■□□□□ 0.9
TRIM4-202ENST00000354241 ARL5AQ9Y689 179 aa20.67■□□□□ 0.9
TRIM4-202ENST00000354241 MROH6A6NGR9 719 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 LDB2O43679 373 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 PAPSS2O95340 614 aaPredicted RBP20.66■□□□□ 0.9
TRIM4-202ENST00000354241 PIGNO95427 931 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 CNTFP26441 200 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 ARNTP27540 789 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 GKP32189 559 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 MAPK8P45983 427 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 SNRPD1P62314 119 aaKnown RBP20.66■□□□□ 0.9
TRIM4-202ENST00000354241 BCL2L1Q07817 233 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 LAMB3Q13751 1172 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 THOC5Q13769 683 aaKnown RBP20.66■□□□□ 0.9
TRIM4-202ENST00000354241 GRTP1Q5TC63 336 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 NLRP9Q7RTR0 991 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 CAMK1DQ8IU85 385 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 PAF1Q8N7H5 531 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 RIPOR3Q96MK2 946 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 NKIRAS1Q9NYS0 192 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 SLCO3A1Q9UIG8 710 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 SMG5Q9UPR3 1016 aaKnown RBP20.66■□□□□ 0.9
TRIM4-202ENST00000354241 PCDHB9Q9Y5E1 797 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 SPO11Q9Y5K1 396 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP20.66■□□□□ 0.9
TRIM4-202ENST00000354241 A6NNZ2 444 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 BUD23O43709 281 aaKnown RBP20.66■□□□□ 0.9
TRIM4-202ENST00000354241 SHOX2O60902 331 aaPredicted RBP20.66■□□□□ 0.9
TRIM4-202ENST00000354241 CISD3P0C7P0 127 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 EPHB1P54762 984 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 MPP2Q14168 576 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 PDGFRLQ15198 375 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 TUBB8Q3ZCM7 444 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 YAF2Q8IY57 180 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 CYB5D2Q8WUJ1 264 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 ISG20Q96AZ6 181 aaKnown RBP20.66■□□□□ 0.9
TRIM4-202ENST00000354241 MYO19Q96H55 970 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 SMIM14Q96QK8 99 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 FAM83CQ9BQN1 747 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 CIPCQ9C0C6 399 aa20.66■□□□□ 0.9
TRIM4-202ENST00000354241 MLXIPLQ9NP71 852 aa20.66■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms