RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 HGSNATQ68CP4 663 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 CDC73Q6P1J9 531 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 GJB7Q6PEY0 223 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 PADI6Q6TGC4 694 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 CASP12Q6UXS9 341 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 RIOX2Q8IUF8 465 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 AQP12AQ8IXF9 295 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 CLYBLQ8N0X4 340 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 ATPAF2Q8N5M1 289 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 GALNT11Q8NCW6 608 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 MCPH1Q8NEM0 835 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 OR5T2Q8NGG2 359 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 UTP15Q8TED0 518 aaKnown RBP5.07□□□□□ -1.6
SKP1-202ENST00000353411 SEC14L1Q92503 715 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 ZNF416Q9BWM5 594 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 IKZF3Q9UKT9 509 aa5.07□□□□□ -1.6
SKP1-202ENST00000353411 GAKO14976 1311 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 METTL21EPA6NDL7 271 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 GSG1L2A8MUP6 293 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 KDM4BO94953 1096 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 ZNF682O95780 498 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 PGRP06401 933 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 ZNF37AP17032 561 aaPredicted RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 PTGER2P43116 358 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 RORCP51449 518 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 TFAMQ00059 246 aaKnown RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 PROSER3Q2NL68 480 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 CORO6Q6QEF8 472 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 PIWIL4Q7Z3Z4 852 aaKnown RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 UNC5BQ8IZJ1 945 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 TBC1D19Q8N5T2 526 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 MARCH10Q8NA82 808 aaPredicted RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 COA7Q96BR5 231 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 IDI2Q9BXS1 227 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 ZC3H12CQ9C0D7 883 aaKnown RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 SLC7A5P2Q9GIP4 190 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 RACGAP1Q9H0H5 632 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 EXD2Q9NVH0 621 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 IL20Q9NYY1 176 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 ACTR3BQ9P1U1 418 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 EIF3KQ9UBQ5 218 aaKnown RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 ARHGEF17Q96PE2 2063 aaPredicted RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 A0A087X0B3 334 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 ATP6AP2A0A1C7CYW4 349 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 TPP1O14773 563 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 LIASO43766 372 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 AKAP8O43823 692 aaKnown RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 PIGNO95427 931 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 CYP1A2P05177 515 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 FOSL2P15408 326 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 TNNI3P19429 210 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 LRRC74AQ0VAA2 488 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 STX4Q12846 297 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 CCBE1Q6UXH8 406 aaPredicted RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 NOXA1Q86UR1 476 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 CYP4Z2PQ8N1L4 340 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 SKA2Q8WVK7 121 aaPredicted RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 MSTO1Q9BUK6 570 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 CEPT1Q9Y6K0 416 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 A0A096LPK6 155 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 FAM25EA8MYX2 175 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 NRP2O60462 931 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 MED24O75448 989 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 PSIP1O75475 530 aaKnown RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 HOXD11P31277 338 aaPredicted RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 BCAMP50895 628 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 PSMD4P55036 377 aaKnown RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 AP3S2P59780 193 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 MTM1Q13496 603 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 TNFAIP1Q13829 316 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 SNRNP35Q16560 246 aaKnown RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 LRRC38Q5VT99 294 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 BPHLQ86WA6 291 aaPredicted RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 RELL1Q8IUW5 271 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 OR8K5Q8NH50 307 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 CDC26Q8NHZ8 85 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 ZNF496Q96IT1 587 aaPredicted RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 PFDN5Q99471 154 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 CTRCQ99895 268 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 BIN3Q9NQY0 253 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 EBF1Q9UH73 591 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 LEF1Q9UJU2 399 aaPredicted RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 EVPLQ92817 2033 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 A0A0B4J269 797 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 H0YAE9 185 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 ECDO95905 644 aaPredicted RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 STOMP27105 288 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 PTGIRP43119 386 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 SLC7A2P52569 658 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 PEX3P56589 373 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 NFIAQ12857 509 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 CDKL4Q5MAI5 379 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 DDX59Q5T1V6 619 aaKnown RBP eCLIP5.06□□□□□ -1.6
SKP1-202ENST00000353411 SIGIRRQ6IA17 410 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 SLC44A2Q8IWA5 706 aaPredicted RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 FAM20CQ8IXL6 584 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 LRRC47Q8N1G4 583 aaKnown RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 EFCAB3Q8N7B9 438 aa5.06□□□□□ -1.6
SKP1-202ENST00000353411 FAM120BQ96EK7 910 aaKnown RBP5.06□□□□□ -1.6
SKP1-202ENST00000353411 CDCA5Q96FF9 252 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms