RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 FEN1P39748 380 aaKnown RBP16.11■□□□□ 0.17
PTPN11-201ENST00000351677 PPM1JQ5JR12 505 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 LBX2Q6XYB7 198 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 C8orf59Q8N0T1 100 aaPredicted RBP16.11■□□□□ 0.17
PTPN11-201ENST00000351677 LINGO1Q96FE5 620 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 ATP13A3Q9H7F0 1226 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 STK39Q9UEW8 545 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 EFR3BQ9Y2G0 817 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 ULK1O75385 1050 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 LPOP22079 712 aaPredicted RBP16.1■□□□□ 0.17
PTPN11-201ENST00000351677 PTGIRP43119 386 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 TCEA2Q15560 299 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 POTEHQ6S545 545 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 OR6K2Q8NGY2 324 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 EMID1Q96A84 441 aaPredicted RBP16.1■□□□□ 0.17
PTPN11-201ENST00000351677 ZNF558Q96NG5 402 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 NMUR2Q9GZQ4 415 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 PEAK1Q9H792 1746 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 TRAV19A0A0A6YYK7 116 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 AZIN1O14977 448 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 TSPAN1O60635 241 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 CRHR1P34998 444 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 TEX44Q53QW1 395 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 CYP20A1Q6UW02 462 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 FGD2Q7Z6J4 655 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 PYROXD2Q8N2H3 581 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 WRAP73Q9P2S5 460 aaPredicted RBP16.1■□□□□ 0.17
PTPN11-201ENST00000351677 COL1A2P08123 1366 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 FAM25AB3EWG3 89 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 FAM25CB3EWG5 89 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 FAM25GB3EWG6 89 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 POLD2P49005 469 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 CYP2A13Q16696 494 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 NKD2Q969F2 451 aaPredicted RBP16.1■□□□□ 0.17
PTPN11-201ENST00000351677 EGFL7Q9UHF1 273 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 PCDHGC3Q9UN70 934 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 HBS1LQ9Y450 684 aaKnown RBP16.1■□□□□ 0.17
PTPN11-201ENST00000351677 MDM4O15151 490 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 TREHO43280 583 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 MC4RP32245 332 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 INAQ16352 499 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 BRMS1LQ5PSV4 323 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 ZNF605Q86T29 641 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 ECHDC2Q86YB7 292 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 CCDC185Q8N715 623 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 RHOJQ9H4E5 214 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 IGFLR1Q9H665 355 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 CHRAC1Q9NRG0 131 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 CSH1P0DML2 217 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 CSH2P0DML3 217 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 TCF3P15923 654 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 NOS3P29474 1203 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 TARBP2Q15633 366 aaKnown RBP16.1■□□□□ 0.17
PTPN11-201ENST00000351677 FAM151BQ6UXP7 276 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 PROX1Q92786 737 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 FAM192AQ9GZU8 254 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 PCDH12Q9NPG4 1184 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 PCDHB9Q9Y5E1 797 aa16.1■□□□□ 0.17
PTPN11-201ENST00000351677 SNUPNO95149 360 aaKnown RBP16.09■□□□□ 0.17
PTPN11-201ENST00000351677 CLTBP09497 229 aa16.09■□□□□ 0.17
PTPN11-201ENST00000351677 SMAD3P84022 425 aaKnown RBP16.09■□□□□ 0.17
PTPN11-201ENST00000351677 FSTL1Q12841 308 aa16.09■□□□□ 0.17
PTPN11-201ENST00000351677 KRR1Q13601 381 aaKnown RBP16.09■□□□□ 0.17
PTPN11-201ENST00000351677 EPHX4Q8IUS5 362 aa16.09■□□□□ 0.17
PTPN11-201ENST00000351677 CDK20Q8IZL9 346 aa16.09■□□□□ 0.17
PTPN11-201ENST00000351677 DYRK3O43781 588 aa16.09■□□□□ 0.17
PTPN11-201ENST00000351677 RECQL5O94762 991 aaPredicted RBP16.09■□□□□ 0.17
PTPN11-201ENST00000351677 TPSB2P20231 275 aa16.09■□□□□ 0.17
PTPN11-201ENST00000351677 TPSAB1Q15661 275 aa16.09■□□□□ 0.17
PTPN11-201ENST00000351677 ZCCHC8Q6NZY4 707 aaKnown RBP16.09■□□□□ 0.17
PTPN11-201ENST00000351677 CLNKQ7Z7G1 428 aa16.09■□□□□ 0.17
PTPN11-201ENST00000351677 MON1AQ86VX9 555 aa16.09■□□□□ 0.17
PTPN11-201ENST00000351677 CPNE8Q86YQ8 564 aa16.09■□□□□ 0.17
PTPN11-201ENST00000351677 PTCD3Q96EY7 689 aaKnown RBP16.09■□□□□ 0.17
PTPN11-201ENST00000351677 DMAC2Q9NW81 257 aa16.09■□□□□ 0.17
PTPN11-201ENST00000351677 ANKDD1BA6NHY2 528 aa16.09■□□□□ 0.17
PTPN11-201ENST00000351677 TNNI3P19429 210 aa16.09■□□□□ 0.17
PTPN11-201ENST00000351677 AIF1P55008 147 aa16.09■□□□□ 0.17
PTPN11-201ENST00000351677 MBTD1Q05BQ5 628 aa16.09■□□□□ 0.17
PTPN11-201ENST00000351677 PAGE2BQ5JRK9 111 aa16.09■□□□□ 0.17
PTPN11-201ENST00000351677 RNASEH2BQ5TBB1 312 aaKnown RBP16.09■□□□□ 0.17
PTPN11-201ENST00000351677 RHBDF2Q6PJF5 856 aa16.09■□□□□ 0.17
PTPN11-201ENST00000351677 BPIFB6Q8NFQ5 453 aa16.09■□□□□ 0.17
PTPN11-201ENST00000351677 CHKBQ9Y259 395 aa16.09■□□□□ 0.17
PTPN11-201ENST00000351677 DLG5Q8TDM6 1919 aa16.09■□□□□ 0.17
PTPN11-201ENST00000351677 MAP3K13O43283 966 aa16.09■□□□□ 0.17
PTPN11-201ENST00000351677 PRKAR2AP13861 404 aaKnown RBP16.09■□□□□ 0.17
PTPN11-201ENST00000351677 ADSSP30520 456 aa16.09■□□□□ 0.17
PTPN11-201ENST00000351677 PRKAG1P54619 331 aa16.09■□□□□ 0.17
PTPN11-201ENST00000351677 STARD8Q92502 1023 aa16.09■□□□□ 0.17
PTPN11-201ENST00000351677 MTA2O94776 668 aa16.08■□□□□ 0.17
PTPN11-201ENST00000351677 RPN2P04844 631 aa16.08■□□□□ 0.17
PTPN11-201ENST00000351677 PRKCQQ04759 706 aa16.08■□□□□ 0.17
PTPN11-201ENST00000351677 DSG4Q86SJ6 1040 aa16.08■□□□□ 0.17
PTPN11-201ENST00000351677 TSPAN14Q8NG11 270 aa16.08■□□□□ 0.17
PTPN11-201ENST00000351677 DPF3Q92784 378 aa16.08■□□□□ 0.17
PTPN11-201ENST00000351677 CLPTM1LQ96KA5 538 aa16.08■□□□□ 0.17
PTPN11-201ENST00000351677 PPP3R2Q96LZ3 170 aa16.08■□□□□ 0.17
PTPN11-201ENST00000351677 AGO3Q9H9G7 860 aaKnown RBP16.08■□□□□ 0.17
PTPN11-201ENST00000351677 ATXN2Q99700 1313 aaKnown RBP16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms