RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 SNTG2Q9NY99 539 aa18.81■□□□□ 0.6
SCARF1-202ENST00000348987 CCDC167Q9P0B6 97 aa18.81■□□□□ 0.6
SCARF1-202ENST00000348987 VTI1BQ9UEU0 232 aa18.81■□□□□ 0.6
SCARF1-202ENST00000348987 BPTFQ12830 3046 aa18.8■□□□□ 0.6
SCARF1-202ENST00000348987 BCL10O95999 233 aa18.8■□□□□ 0.6
SCARF1-202ENST00000348987 MPOP05164 745 aa18.8■□□□□ 0.6
SCARF1-202ENST00000348987 HSPA1AP0DMV8 641 aaKnown RBP18.8■□□□□ 0.6
SCARF1-202ENST00000348987 HSPA1BP0DMV9 641 aaKnown RBP18.8■□□□□ 0.6
SCARF1-202ENST00000348987 REP15Q6BDI9 236 aa18.8■□□□□ 0.6
SCARF1-202ENST00000348987 DHFR2Q86XF0 187 aa18.8■□□□□ 0.6
SCARF1-202ENST00000348987 HMGCLL1Q8TB92 370 aa18.8■□□□□ 0.6
SCARF1-202ENST00000348987 SLC39A3Q9BRY0 314 aa18.8■□□□□ 0.6
SCARF1-202ENST00000348987 CD300AQ9UGN4 299 aa18.8■□□□□ 0.6
SCARF1-202ENST00000348987 MAGED2Q9UNF1 606 aaPredicted RBP18.8■□□□□ 0.6
SCARF1-202ENST00000348987 FIS1Q9Y3D6 152 aa18.8■□□□□ 0.6
SCARF1-202ENST00000348987 MDM4O15151 490 aa18.8■□□□□ 0.6
SCARF1-202ENST00000348987 LCP1P13796 627 aa18.8■□□□□ 0.6
SCARF1-202ENST00000348987 TMEM151AQ8N4L1 468 aa18.8■□□□□ 0.6
SCARF1-202ENST00000348987 OR6B3Q8NGW1 331 aa18.8■□□□□ 0.6
SCARF1-202ENST00000348987 SLC7A14Q8TBB6 771 aa18.8■□□□□ 0.6
SCARF1-202ENST00000348987 HPS1Q92902 700 aa18.8■□□□□ 0.6
SCARF1-202ENST00000348987 QKIQ96PU8 341 aaKnown RBP eCLIP18.8■□□□□ 0.6
SCARF1-202ENST00000348987 C1orf50Q9BV19 199 aa18.8■□□□□ 0.6
SCARF1-202ENST00000348987 DTLQ9NZJ0 730 aa18.8■□□□□ 0.6
SCARF1-202ENST00000348987 CLOCKO15516 846 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 GOT1P17174 413 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 LMO2P25791 158 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 ADORA2BP29275 332 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 POLR2IP36954 125 aaKnown RBP18.79■□□□□ 0.6
SCARF1-202ENST00000348987 ZNF484Q5JVG2 852 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 ZNF618Q5T7W0 954 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 CADM3Q8N126 398 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 CSPG4P5Q96PW8 444 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 KCTD15Q96SI1 283 aaPredicted RBP18.79■□□□□ 0.6
SCARF1-202ENST00000348987 TBCBQ99426 244 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 NANOGQ9H9S0 305 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 SUN2Q9UH99 717 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 VPS51Q9UID3 782 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 ADAM28Q9UKQ2 775 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 KIAA1257Q9ULG3 409 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 AP4E1Q9UPM8 1137 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 ST14Q9Y5Y6 855 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 CPQQ9Y646 472 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 A0A0A0MRY4 1105 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 KPNA4O00629 521 aaPredicted RBP18.79■□□□□ 0.6
SCARF1-202ENST00000348987 STX5Q13190 355 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 OXA1LQ15070 435 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 KCNJ8Q15842 424 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 C9orf131Q5VYM1 1079 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 ZYG11AQ6WRX3 759 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 TMCO5AQ8N6Q1 288 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 ZNF669Q96BR6 464 aaPredicted RBP18.79■□□□□ 0.6
SCARF1-202ENST00000348987 SCYL1Q96KG9 808 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 SPATA13Q96N96 652 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 SOX17Q9H6I2 414 aaPredicted RBP18.79■□□□□ 0.6
SCARF1-202ENST00000348987 B3GNT3Q9Y2A9 372 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 TCAF1Q9Y4C2 921 aa18.79■□□□□ 0.6
SCARF1-202ENST00000348987 SBF1O95248 1867 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 C11orf97A0A1B0GVM6 126 aaPredicted RBP18.78■□□□□ 0.6
SCARF1-202ENST00000348987 SLCO1B7G3V0H7 640 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 ATP6V1B2P21281 511 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 RCVRNP35243 200 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 ADCYAP1R1P41586 468 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 PITX1P78337 314 aaPredicted RBP18.78■□□□□ 0.6
SCARF1-202ENST00000348987 POU5F1BQ06416 359 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 DPYSL2Q16555 572 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 AGKQ53H12 422 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 TBCELQ5QJ74 424 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 PERM1Q5SV97 790 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 TAPT1Q6NXT6 567 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 ABRAXAS1Q6UWZ7 409 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 CCNYL1Q8N7R7 359 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 C16orf70Q9BSU1 422 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 IL22Q9GZX6 179 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 UPF3AQ9H1J1 476 aaKnown RBP18.78■□□□□ 0.6
SCARF1-202ENST00000348987 TPK1Q9H3S4 243 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 IQCA1LA6NCM1 817 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 SDHDO14521 159 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 USP12O75317 370 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 CLPXO76031 633 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 CYP2C9P11712 490 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 PSMB4P28070 264 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 HK2P52789 917 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 PLCL1Q15111 1095 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 MARCH8Q5T0T0 291 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 FAM131BQ86XD5 332 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 KDM1BQ8NB78 822 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 OR2T34Q8NGX1 318 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 OR2T3Q8NH03 318 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 CCDC138Q96M89 665 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 OLFM1Q99784 485 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 NAT9Q9BTE0 207 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 C11orf84Q9BUA3 381 aaPredicted RBP18.78■□□□□ 0.6
SCARF1-202ENST00000348987 CDHR5Q9HBB8 845 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 ARMC1Q9NVT9 282 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 SLC39A10Q9ULF5 831 aa18.78■□□□□ 0.6
SCARF1-202ENST00000348987 CITO14578 2027 aa18.77■□□□□ 0.6
SCARF1-202ENST00000348987 HOXA11P31270 313 aaPredicted RBP18.77■□□□□ 0.6
SCARF1-202ENST00000348987 IDUAP35475 653 aa18.77■□□□□ 0.6
SCARF1-202ENST00000348987 SLC7A2P52569 658 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms