RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 PCDHGB5Q9Y5G0 923 aa21.5■■□□□ 1.03
PTPN18-202ENST00000347849 PLXNA3P51805 1871 aa21.49■■□□□ 1.03
PTPN18-202ENST00000347849 PYGLP06737 847 aa21.49■■□□□ 1.03
PTPN18-202ENST00000347849 PMLP29590 882 aa21.49■■□□□ 1.03
PTPN18-202ENST00000347849 SERPINB5P36952 375 aa21.49■■□□□ 1.03
PTPN18-202ENST00000347849 TLE2Q04725 743 aa21.49■■□□□ 1.03
PTPN18-202ENST00000347849 TBC1D25Q3MII6 688 aa21.49■■□□□ 1.03
PTPN18-202ENST00000347849 DCUN1D1Q96GG9 259 aa21.49■■□□□ 1.03
PTPN18-202ENST00000347849 IL12RB2Q99665 862 aa21.49■■□□□ 1.03
PTPN18-202ENST00000347849 UBAP1Q9NZ09 502 aa21.49■■□□□ 1.03
PTPN18-202ENST00000347849 MARCH2Q9P0N8 246 aa21.49■■□□□ 1.03
PTPN18-202ENST00000347849 ATXN10Q9UBB4 475 aa21.49■■□□□ 1.03
PTPN18-202ENST00000347849 NYNRINQ9P2P1 1898 aaKnown RBP21.49■■□□□ 1.03
PTPN18-202ENST00000347849 MATN3O15232 486 aa21.49■■□□□ 1.03
PTPN18-202ENST00000347849 CACNG3O60359 315 aa21.49■■□□□ 1.03
PTPN18-202ENST00000347849 HSPA4LO95757 839 aa21.49■■□□□ 1.03
PTPN18-202ENST00000347849 SMIM18P0DKX4 95 aa21.49■■□□□ 1.03
PTPN18-202ENST00000347849 MSX2P35548 267 aaPredicted RBP21.49■■□□□ 1.03
PTPN18-202ENST00000347849 TRIM60Q495X7 471 aa21.49■■□□□ 1.03
PTPN18-202ENST00000347849 RAP1GAP2Q684P5 730 aa21.49■■□□□ 1.03
PTPN18-202ENST00000347849 EPGNQ6UW88 154 aa21.49■■□□□ 1.03
PTPN18-202ENST00000347849 RBM44Q6ZP01 1051 aaKnown RBP21.49■■□□□ 1.03
PTPN18-202ENST00000347849 PQLC1Q8N2U9 271 aa21.49■■□□□ 1.03
PTPN18-202ENST00000347849 MAPK15Q8TD08 544 aa21.49■■□□□ 1.03
PTPN18-202ENST00000347849 C1orf74Q96LT6 269 aa21.49■■□□□ 1.03
PTPN18-202ENST00000347849 LRRC40Q9H9A6 602 aa21.49■■□□□ 1.03
PTPN18-202ENST00000347849 AP1G1O43747 822 aa21.48■■□□□ 1.03
PTPN18-202ENST00000347849 CXCL10P02778 98 aa21.48■■□□□ 1.03
PTPN18-202ENST00000347849 NMBRP28336 390 aa21.48■■□□□ 1.03
PTPN18-202ENST00000347849 COG7P83436 770 aa21.48■■□□□ 1.03
PTPN18-202ENST00000347849 INSCQ1MX18 579 aa21.48■■□□□ 1.03
PTPN18-202ENST00000347849 PABPC1LQ4VXU2 614 aaKnown RBP21.48■■□□□ 1.03
PTPN18-202ENST00000347849 FBXL22Q6P050 247 aa21.48■■□□□ 1.03
PTPN18-202ENST00000347849 PLD6Q8N2A8 252 aaKnown RBP21.48■■□□□ 1.03
PTPN18-202ENST00000347849 FBXO22Q8NEZ5 403 aa21.48■■□□□ 1.03
PTPN18-202ENST00000347849 IPMKQ8NFU5 416 aa21.48■■□□□ 1.03
PTPN18-202ENST00000347849 RTKNQ9BST9 563 aa21.48■■□□□ 1.03
PTPN18-202ENST00000347849 ATXN3LQ9H3M9 355 aa21.48■■□□□ 1.03
PTPN18-202ENST00000347849 PRDM5Q9NQX1 630 aaPredicted RBP21.48■■□□□ 1.03
PTPN18-202ENST00000347849 RBM22Q9NW64 420 aaKnown RBP eCLIP21.48■■□□□ 1.03
PTPN18-202ENST00000347849 NDUFA13Q9P0J0 144 aa21.48■■□□□ 1.03
PTPN18-202ENST00000347849 G3BP2Q9UN86 482 aaKnown RBP21.48■■□□□ 1.03
PTPN18-202ENST00000347849 PSMD13Q9UNM6 376 aa21.48■■□□□ 1.03
PTPN18-202ENST00000347849 SSX2IPQ9Y2D8 614 aa21.48■■□□□ 1.03
PTPN18-202ENST00000347849 SLC12A8A0AV02 714 aa21.48■■□□□ 1.03
PTPN18-202ENST00000347849 CCDC160A6NGH7 325 aa21.48■■□□□ 1.03
PTPN18-202ENST00000347849 J3KR12 359 aa21.48■■□□□ 1.03
PTPN18-202ENST00000347849 DNAJA2O60884 412 aa21.48■■□□□ 1.03
PTPN18-202ENST00000347849 CLPTM1O96005 669 aa21.48■■□□□ 1.03
PTPN18-202ENST00000347849 NAPRTQ6XQN6 538 aa21.48■■□□□ 1.03
PTPN18-202ENST00000347849 SLC39A5Q6ZMH5 540 aa21.48■■□□□ 1.03
PTPN18-202ENST00000347849 SPPL2BQ8TCT7 592 aa21.48■■□□□ 1.03
PTPN18-202ENST00000347849 PPP1R36Q96LQ0 422 aa21.48■■□□□ 1.03
PTPN18-202ENST00000347849 PRICKLE1Q96MT3 831 aaPredicted RBP21.48■■□□□ 1.03
PTPN18-202ENST00000347849 OR52B2Q96RD2 323 aa21.48■■□□□ 1.03
PTPN18-202ENST00000347849 NAT9Q9BTE0 207 aa21.48■■□□□ 1.03
PTPN18-202ENST00000347849 CDH19Q9H159 772 aa21.48■■□□□ 1.03
PTPN18-202ENST00000347849 GLOD4Q9HC38 313 aa21.48■■□□□ 1.03
PTPN18-202ENST00000347849 IPO11Q9UI26 975 aaKnown RBP21.48■■□□□ 1.03
PTPN18-202ENST00000347849 LZTS1Q9Y250 596 aa21.48■■□□□ 1.03
PTPN18-202ENST00000347849 GOLGA8QA0A0J9YX86 632 aa21.47■■□□□ 1.03
PTPN18-202ENST00000347849 GOLGA8OA6NCC3 632 aa21.47■■□□□ 1.03
PTPN18-202ENST00000347849 GOLGA8NF8WBI6 632 aa21.47■■□□□ 1.03
PTPN18-202ENST00000347849 DENRO43583 198 aaKnown RBP21.47■■□□□ 1.03
PTPN18-202ENST00000347849 PEX11BO96011 259 aa21.47■■□□□ 1.03
PTPN18-202ENST00000347849 TFAP2AP05549 437 aa21.47■■□□□ 1.03
PTPN18-202ENST00000347849 RPL26P61254 145 aaKnown RBP21.47■■□□□ 1.03
PTPN18-202ENST00000347849 CNGA3Q16281 694 aa21.47■■□□□ 1.03
PTPN18-202ENST00000347849 HSP90AA5PQ58FG0 334 aa21.47■■□□□ 1.03
PTPN18-202ENST00000347849 SPANXN3Q5MJ09 141 aa21.47■■□□□ 1.03
PTPN18-202ENST00000347849 LZTR1Q8N653 840 aa21.47■■□□□ 1.03
PTPN18-202ENST00000347849 MOCOSQ96EN8 888 aa21.47■■□□□ 1.03
PTPN18-202ENST00000347849 HMCESQ96FZ2 354 aa21.47■■□□□ 1.03
PTPN18-202ENST00000347849 KLHL5Q96PQ7 755 aa21.47■■□□□ 1.03
PTPN18-202ENST00000347849 PCDHB12Q9Y5F1 795 aa21.47■■□□□ 1.03
PTPN18-202ENST00000347849 TTC24A2A3L6 582 aaPredicted RBP21.47■■□□□ 1.03
PTPN18-202ENST00000347849 ERI2A8K979 691 aaKnown RBP21.47■■□□□ 1.03
PTPN18-202ENST00000347849 VILLO15195 856 aa21.47■■□□□ 1.03
PTPN18-202ENST00000347849 OR1D2P34982 312 aa21.47■■□□□ 1.03
PTPN18-202ENST00000347849 RPL5P46777 297 aaKnown RBP21.47■■□□□ 1.03
PTPN18-202ENST00000347849 NUDT2P50583 147 aa21.47■■□□□ 1.03
PTPN18-202ENST00000347849 KCNQ1P51787 676 aa21.47■■□□□ 1.03
PTPN18-202ENST00000347849 NRG1Q02297 640 aaPredicted RBP21.47■■□□□ 1.03
PTPN18-202ENST00000347849 ZNF33AQ06730 810 aa21.47■■□□□ 1.03
PTPN18-202ENST00000347849 DENND5AQ6IQ26 1287 aa21.47■■□□□ 1.03
PTPN18-202ENST00000347849 MARVELD2Q8N4S9 558 aa21.47■■□□□ 1.03
PTPN18-202ENST00000347849 SERBP1Q8NC51 408 aaKnown RBP eCLIP21.47■■□□□ 1.03
PTPN18-202ENST00000347849 DIS3LQ8TF46 1054 aaKnown RBP21.47■■□□□ 1.03
PTPN18-202ENST00000347849 DNAJC1Q96KC8 554 aaKnown RBP21.47■■□□□ 1.03
PTPN18-202ENST00000347849 TLR8Q9NR97 1041 aaKnown RBP21.47■■□□□ 1.03
PTPN18-202ENST00000347849 SNX15Q9NRS6 342 aa21.47■■□□□ 1.03
PTPN18-202ENST00000347849 C6orf203Q9P0P8 240 aaPredicted RBP21.47■■□□□ 1.03
PTPN18-202ENST00000347849 PMPCBO75439 489 aa21.46■■□□□ 1.03
PTPN18-202ENST00000347849 ASLP04424 464 aa21.46■■□□□ 1.03
PTPN18-202ENST00000347849 PRDX6P30041 224 aa21.46■■□□□ 1.03
PTPN18-202ENST00000347849 SH3BGRP55822 239 aaPredicted RBP21.46■■□□□ 1.03
PTPN18-202ENST00000347849 IHHQ14623 411 aa21.46■■□□□ 1.03
PTPN18-202ENST00000347849 ANKS3Q6ZW76 656 aa21.46■■□□□ 1.03
PTPN18-202ENST00000347849 ACVR1CQ8NER5 493 aa21.46■■□□□ 1.03
PTPN18-202ENST00000347849 LRGUKQ96M69 825 aa21.46■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms