RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 THSD7BQ9C0I4 1608 aa16.01■□□□□ 0.15
HMGA1-202ENST00000347617 FUOMA2VDF0 154 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 GIPC1O14908 333 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 AKAP10O43572 662 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 PDGFRBP09619 1106 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 ERVK-10P10266 1014 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 CSRP3P50461 194 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 KPNA2P52292 529 aaKnown RBP16■□□□□ 0.15
HMGA1-202ENST00000347617 KCNC4Q03721 635 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 TRIM71Q2Q1W2 868 aaKnown RBP16■□□□□ 0.15
HMGA1-202ENST00000347617 SPATS1Q496A3 300 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 ARL13AQ5H913 290 aaPredicted RBP16■□□□□ 0.15
HMGA1-202ENST00000347617 ARHGAP17Q68EM7 881 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 NCBP2-AS2Q69YL0 99 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 CHSY3Q70JA7 882 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 ERMP1Q7Z2K6 904 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 TMEM110Q86TL2 294 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 TMEM135Q86UB9 458 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 SLC43A3Q8NBI5 491 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 STYXQ8WUJ0 223 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 LPGAT1Q92604 370 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 WNT8BQ93098 351 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 ABHD8Q96I13 439 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 GLT1D1Q96MS3 346 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 CSPG4P5Q96PW8 444 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 OLFM1Q99784 485 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 PAIP1Q9H074 479 aaKnown RBP16■□□□□ 0.15
HMGA1-202ENST00000347617 CXCL16Q9H2A7 254 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 DHX35Q9H5Z1 703 aaKnown RBP16■□□□□ 0.15
HMGA1-202ENST00000347617 HMX1Q9NP08 348 aaPredicted RBP16■□□□□ 0.15
HMGA1-202ENST00000347617 CNOT6Q9ULM6 557 aaKnown RBP16■□□□□ 0.15
HMGA1-202ENST00000347617 TDRKHQ9Y2W6 561 aaKnown RBP16■□□□□ 0.15
HMGA1-202ENST00000347617 SNX13Q9Y5W8 968 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 RAD54BQ9Y620 910 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 BOLA2-SMG1P6H3BVE0 249 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 INHBBP09529 407 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 MAGEA10P43363 369 aaPredicted RBP16■□□□□ 0.15
HMGA1-202ENST00000347617 NPY2RP49146 381 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 VEGFBP49765 207 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 IFRD2Q12894 506 aaPredicted RBP16■□□□□ 0.15
HMGA1-202ENST00000347617 DSC3Q14574 896 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 TGFBIQ15582 683 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 ITPRIPL1Q6GPH6 555 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 ISLR2Q6UXK2 745 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 PELI3Q8N2H9 469 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 TOP6BLQ8N6T0 577 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 FAM47BQ8NA70 645 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 UBA3Q8TBC4 463 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 TRUB1Q8WWH5 349 aaKnown RBP16■□□□□ 0.15
HMGA1-202ENST00000347617 PGBD4Q96DM1 585 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 ZNF512Q96ME7 567 aaPredicted RBP16■□□□□ 0.15
HMGA1-202ENST00000347617 C9orf16Q9BUW7 83 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 LIN28AQ9H9Z2 209 aaKnown RBP16■□□□□ 0.15
HMGA1-202ENST00000347617 CXorf21Q9HAI6 301 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 TMEM165Q9HC07 324 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 DUS2Q9NX74 493 aaKnown RBP16■□□□□ 0.15
HMGA1-202ENST00000347617 GIN1Q9NXP7 522 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 TSPAN16Q9UKR8 245 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 ZNF232Q9UNY5 417 aa16■□□□□ 0.15
HMGA1-202ENST00000347617 AQP12BA6NM10 295 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 RNF103O00237 685 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 SRP72O76094 671 aaKnown RBP15.99■□□□□ 0.15
HMGA1-202ENST00000347617 EIF2S1P05198 315 aaKnown RBP15.99■□□□□ 0.15
HMGA1-202ENST00000347617 CHRNGP07510 517 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 THPOP40225 353 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 ATP4BP51164 291 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 MPP1Q00013 466 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 LRP8Q14114 963 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 SOWAHAQ2M3V2 549 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 PKDCCQ504Y2 493 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 RAB6CQ53S08 254 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 MTX3Q5HYI7 312 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 GLRA4Q5JXX5 417 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 LHX8Q68G74 356 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 PRMT9Q6P2P2 845 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 LYSMD3Q7Z3D4 306 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 AQP12AQ8IXF9 295 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 MYO1HQ8N1T3 1032 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 ZNF513Q8N8E2 541 aaPredicted RBP15.99■□□□□ 0.15
HMGA1-202ENST00000347617 ARRDC4Q8NCT1 418 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 TBC1D15Q8TC07 691 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 ZNF669Q96BR6 464 aaPredicted RBP15.99■□□□□ 0.15
HMGA1-202ENST00000347617 PHF12Q96QT6 1004 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 GPR22Q99680 433 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 MCMBPQ9BTE3 642 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 SLC25A23Q9BV35 468 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 NPLQ9BXD5 320 aaPredicted RBP15.99■□□□□ 0.15
HMGA1-202ENST00000347617 RAB6CQ9H0N0 254 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 TASP1Q9H6P5 420 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 RPF2Q9H7B2 306 aaKnown RBP15.99■□□□□ 0.15
HMGA1-202ENST00000347617 GID8Q9NWU2 228 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 CD300AQ9UGN4 299 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 HMGXB4Q9UGU5 601 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 EBF1Q9UH73 591 aa15.99■□□□□ 0.15
HMGA1-202ENST00000347617 SCN1AP35498 2009 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 PTGESO14684 152 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 PPEF2O14830 753 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 LTFP02788 710 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 FCGR1AP12314 374 aa15.98■□□□□ 0.15
HMGA1-202ENST00000347617 RPL9P32969 192 aaKnown RBP15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms