RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 ACADSBP45954 432 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 BCAT1P54687 386 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 AIF1P55008 147 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 ZBTB17Q13105 803 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 SEPT7Q16181 437 aaKnown RBP7.43□□□□□ -1.22
ZNF540-202ENST00000343599 CCDC6Q16204 474 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 CCDC14Q49A88 953 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 BOLA3Q53S33 107 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 C6orf183Q5T699 404 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 JADE1Q6IE81 842 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 TXNDC11Q6PKC3 985 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 DHRS4L2Q6PKH6 230 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 ACAD11Q709F0 780 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 NLRP9Q7RTR0 991 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 STK11IPQ8N1F8 1099 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 RPLP0P6Q8NHW5 317 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 GABPB2Q8TAK5 448 aaPredicted RBP7.43□□□□□ -1.22
ZNF540-202ENST00000343599 SAP25Q8TEE9 199 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 SCFD1Q8WVM8 642 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 UBLCP1Q8WVY7 318 aaPredicted RBP7.43□□□□□ -1.22
ZNF540-202ENST00000343599 SLC7A6OSQ96CW6 309 aaPredicted RBP7.43□□□□□ -1.22
ZNF540-202ENST00000343599 DNAJC19Q96DA6 116 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 HSFY1Q96LI6 401 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 KRT12Q99456 494 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 MSTO1Q9BUK6 570 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 DDA1Q9BW61 102 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 STK33Q9BYT3 514 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 LRRC4CQ9HCJ2 640 aa7.43□□□□□ -1.22
ZNF540-202ENST00000343599 EDDM13A0A1B0GTR0 161 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 A0A1W2PPC4 97 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 SFI1A8K8P3 1242 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 K7ENP7 123 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 PDXKO00764 312 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 IGLV3-25P01717 112 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 RALAP11233 206 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 CKMT2P17540 419 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 CXCR5P32302 372 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 CREB5Q02930 508 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 FYB2Q5VWT5 728 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 INO80CQ6PI98 192 aaPredicted RBP7.42□□□□□ -1.22
ZNF540-202ENST00000343599 ENOSF1Q7L5Y1 443 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 SATL1Q86VE3 508 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 SFR1Q86XK3 245 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 FSTL5Q8N475 847 aaPredicted RBP7.42□□□□□ -1.22
ZNF540-202ENST00000343599 MINDY1Q8N5J2 469 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 SH3RF2Q8TEC5 729 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 NAT6Q93015 286 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 PRICKLE1Q96MT3 831 aaPredicted RBP7.42□□□□□ -1.22
ZNF540-202ENST00000343599 SCNM1Q9BWG6 230 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 HAPLN2Q9GZV7 340 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 RBM38Q9H0Z9 239 aaKnown RBP7.42□□□□□ -1.22
ZNF540-202ENST00000343599 CNGB3Q9NQW8 809 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 BLOC1S4Q9NUP1 217 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 DNPEPQ9ULA0 475 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 TRIM64CA6NLI5 447 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 CES2O00748 559 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 PLRG1O43660 514 aaKnown RBP7.42□□□□□ -1.22
ZNF540-202ENST00000343599 AGTP01019 485 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 CCDC159P0C7I6 412 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 ALPPL2P10696 532 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 SLC2A3P11169 496 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 EPHA8P29322 1005 aaPredicted RBP7.42□□□□□ -1.22
ZNF540-202ENST00000343599 ABCG1P45844 678 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 TNNC1P63316 161 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 KCNMA1Q12791 1236 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 DRAP1Q14919 205 aaPredicted RBP7.42□□□□□ -1.22
ZNF540-202ENST00000343599 MYLK3Q32MK0 819 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 TCP11X2Q5H9J9 407 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 HS2ST1Q7LGA3 356 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 STRADAQ7RTN6 431 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 ARHGAP24Q8N264 748 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 SNX29Q8TEQ0 813 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 MS4A14Q96JA4 679 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 COX4I2Q96KJ9 171 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 EGLN2Q96KS0 407 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 NEURL2Q9BR09 285 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 C2orf49Q9BVC5 232 aaPredicted RBP7.42□□□□□ -1.22
ZNF540-202ENST00000343599 FGFR1OP2Q9NVK5 253 aa7.42□□□□□ -1.22
ZNF540-202ENST00000343599 MTPAPQ9NVV4 582 aaKnown RBP eCLIP7.42□□□□□ -1.22
ZNF540-202ENST00000343599 PCM1Q15154 2024 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 FUOMA2VDF0 154 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 B8ZZF3 427 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 BCAT2O15382 392 aaPredicted RBP7.41□□□□□ -1.22
ZNF540-202ENST00000343599 TOX3O15405 576 aaPredicted RBP7.41□□□□□ -1.22
ZNF540-202ENST00000343599 PJA2O43164 708 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 MOCS3O95396 460 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 FGFR4P22455 802 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 CRABP2P29373 138 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 RECQLP46063 649 aaPredicted RBP7.41□□□□□ -1.22
ZNF540-202ENST00000343599 VPS41P49754 854 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 RASSF2P50749 326 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 AFF1P51825 1210 aaKnown RBP7.41□□□□□ -1.22
ZNF540-202ENST00000343599 NTHL1P78549 312 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 MC1RQ01726 317 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 SRSF1Q07955 248 aaKnown RBP eCLIP7.41□□□□□ -1.22
ZNF540-202ENST00000343599 SCAPQ12770 1279 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 TGFBIQ15582 683 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 KLHDC7AQ5VTJ3 777 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 FAM46CQ5VWP2 391 aa7.41□□□□□ -1.22
ZNF540-202ENST00000343599 ABI3BPQ7Z7G0 1075 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms