RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 GBA3Q9H227 469 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 TMEM165Q9HC07 324 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 OXSMQ9NWU1 459 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 ADPRHL2Q9NX46 363 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 PIM2Q9P1W9 311 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 TTLL13PA6NNM8 815 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 H3BSA7 217 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 NPHS1O60500 1241 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 B4GALT4O60513 344 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 LRIG2O94898 1065 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 CST3P01034 146 aaPredicted RBP4.82□□□□□ -1.64
CSMD3-203ENST00000343508 IL6P05231 212 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 SERPINF2P08697 491 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 MAPK10P53779 464 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 CSNK2BP67870 215 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 PFKFB4Q16877 469 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 FKBP1CQ5VVH2 108 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 ARHGAP36Q6ZRI8 547 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 SVOPLQ8N434 492 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 SLC47A1Q96FL8 570 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 PLEKHA8Q96JA3 519 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 EHD3Q9NZN3 535 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 GMIPQ9P107 970 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 TMA7Q9Y2S6 64 aaKnown RBP4.82□□□□□ -1.64
CSMD3-203ENST00000343508 TPH1P17752 444 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 MYL12AP19105 171 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 PLK1P53350 603 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 KRT33BQ14525 404 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 PTPN20Q4JDL3 420 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 SFT2D3Q587I9 215 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 ZNF544Q6NX49 715 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 SLC30A10Q6XR72 485 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 THAP5Q7Z6K1 395 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 SPON2Q9BUD6 331 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 SDCBP2Q9H190 292 aa4.82□□□□□ -1.64
CSMD3-203ENST00000343508 SH3PXD2BA1X283 911 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 KRT87PA6NCN2 255 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 USP12O75317 370 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 MT-CO1P00395 513 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 RECQLP46063 649 aaPredicted RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 ANXA11P50995 505 aaKnown RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 RAB25P57735 213 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 ADAM17P78536 824 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 RHDQ02161 417 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 C11orf91Q3C1V1 193 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 ZIK1Q3SY52 487 aaPredicted RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 KIAA0408Q6ZU52 694 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 CMC1Q7Z7K0 106 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 SCUBE2Q9NQ36 999 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 CNOT11Q9UKZ1 510 aaKnown RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 E7ENX8 843 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 PABPC1P11940 636 aaKnown RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 SLC2A4P14672 509 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 ITGB5P18084 799 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 ETFBP38117 255 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 PPP3CCP48454 512 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 MOGQ16653 247 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 DCLRE1AQ6PJP8 1040 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 TIFABQ6ZNK6 161 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 ARL10Q8N8L6 244 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 FNDC8Q8TC99 324 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 NODALQ96S42 347 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 OMDQ99983 421 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 WDR55Q9H6Y2 383 aaPredicted RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 SEMA4BQ9NPR2 832 aaPredicted RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 ABCC13Q9NSE7 274 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 IKZF3Q9UKT9 509 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 GMPPBQ9Y5P6 360 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 ALS2Q96Q42 1657 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 ADAMTS3O15072 1205 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 ARIH2O95376 493 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 MYL3P08590 195 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 C7P10643 843 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 NFKB1P19838 968 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 TUBA3CQ13748 450 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 PCLAFQ15004 111 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 SLC27A1Q6PCB7 646 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 MILR1Q7Z6M3 343 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 CMASQ8NFW8 434 aaPredicted RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 RASSF5Q8WWW0 418 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 C18orf25Q96B23 403 aaPredicted RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 ADI1Q9BV57 179 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 UNKQ9C0B0 810 aaKnown RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 MGAT4DA6NG13 374 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 AQP12BA6NM10 295 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 LOC110117498-PIK3R3F6TDL0 507 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 BTN3A1O00481 513 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 COPZ1P61923 177 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 PLIN5Q00G26 463 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 COX10Q12887 443 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 SYTL3Q4VX76 610 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 TEX44Q53QW1 395 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 RNF219Q5W0B1 726 aaPredicted RBP4.81□□□□□ -1.64
CSMD3-203ENST00000343508 P2RY8Q86VZ1 359 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 AQP12AQ8IXF9 295 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 OR6J1Q8NGC5 347 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 OTULINQ96BN8 352 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 HSPBAP1Q96EW2 488 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 CPXM1Q96SM3 734 aa4.81□□□□□ -1.64
CSMD3-203ENST00000343508 APOL5Q9BWW9 433 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms