RNA–Protein interactions for RNA: ENST00000343060.4

HOXA1-201, Transcript of homeobox A1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA1, Length 2,517 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-201ENST00000343060 DCLK1O15075 740 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 GPIP06744 558 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 STAG3L1P0CL83 205 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 FCGR1AP12314 374 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 MATN1P21941 496 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 JAK1P23458 1154 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 ATP5F1P24539 256 aaPredicted RBP9.74□□□□□ -0.85
HOXA1-201ENST00000343060 ARCN1P48444 511 aaKnown RBP9.74□□□□□ -0.85
HOXA1-201ENST00000343060 MLLT10P55197 1068 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 C1QTNF8P60827 252 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 ADARB1P78563 741 aaKnown RBP9.74□□□□□ -0.85
HOXA1-201ENST00000343060 GALNT1Q10472 559 aaPredicted RBP9.74□□□□□ -0.85
HOXA1-201ENST00000343060 GALNT18Q6P9A2 607 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 BNIPLQ7Z465 357 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 EXOC8Q8IYI6 725 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 CMTR2Q8IYT2 770 aaKnown RBP9.74□□□□□ -0.85
HOXA1-201ENST00000343060 AFAP1L2Q8N4X5 818 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 CLEC4CQ8WTT0 213 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 NGLY1Q96IV0 654 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 C8orf37Q96NL8 207 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 MRPL57Q9BQC6 102 aaKnown RBP9.74□□□□□ -0.85
HOXA1-201ENST00000343060 MLPHQ9BV36 600 aaPredicted RBP9.74□□□□□ -0.85
HOXA1-201ENST00000343060 GBA3Q9H227 469 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 FAM49BQ9NUQ9 324 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 SMPD3Q9NY59 655 aaPredicted RBP9.74□□□□□ -0.85
HOXA1-201ENST00000343060 CCDC167Q9P0B6 97 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 SEPT10Q9P0V9 454 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 ACTR3BQ9P1U1 418 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 GMPR2Q9P2T1 348 aaKnown RBP9.74□□□□□ -0.85
HOXA1-201ENST00000343060 PSME2Q9UL46 239 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 GIT1Q9Y2X7 761 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 ACOT9Q9Y305 439 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 CPQQ9Y646 472 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 DOCK1Q14185 1865 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 USP12O75317 370 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 BCL10O95999 233 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 MBL2P11226 248 aaPredicted RBP9.74□□□□□ -0.85
HOXA1-201ENST00000343060 DNAJB2P25686 324 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 EIF2B2P49770 351 aaKnown RBP9.74□□□□□ -0.85
HOXA1-201ENST00000343060 RAB10P61026 200 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 TRAF2Q12933 501 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 CERCAMQ5T4B2 595 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 DEPDC1Q5TB30 811 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 OTUD1Q5VV17 481 aaPredicted RBP9.74□□□□□ -0.85
HOXA1-201ENST00000343060 GTF2IRD2BQ6EKJ0 949 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 LINC00299Q6ZSB3 139 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 FRA10AC1Q70Z53 315 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 PID1Q7Z2X4 250 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 GTF2IRD2Q86UP8 949 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 TRIM50Q86XT4 487 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 SLC41A1Q8IVJ1 513 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 FUNDC1Q8IVP5 155 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 DHRSXQ8N5I4 330 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 CCNYL1Q8N7R7 359 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 PAPD5Q8NDF8 572 aaKnown RBP9.74□□□□□ -0.85
HOXA1-201ENST00000343060 DNERQ8NFT8 737 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 CASP10Q92851 521 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 TAMM41Q96BW9 452 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 EFHD2Q96C19 240 aaPredicted RBP9.74□□□□□ -0.85
HOXA1-201ENST00000343060 ALPK1Q96QP1 1244 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 ZNF347Q96SE7 839 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 HOPXQ9BPY8 73 aaPredicted RBP9.74□□□□□ -0.85
HOXA1-201ENST00000343060 KIFC1Q9BW19 673 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 MUC13Q9H3R2 512 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 RMI1Q9H9A7 625 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 MAGEE1Q9HCI5 957 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 TBC1D13Q9NVG8 400 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 GTSE1Q9NYZ3 720 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 SCHIP1Q9P0W5 487 aaPredicted RBP9.74□□□□□ -0.85
HOXA1-201ENST00000343060 KLHL8Q9P2G9 620 aaPredicted RBP9.74□□□□□ -0.85
HOXA1-201ENST00000343060 OAZ3Q9UMX2 235 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 VWA7Q9Y334 891 aa9.74□□□□□ -0.85
HOXA1-201ENST00000343060 PLXNA1Q9UIW2 1896 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 H0YAE9 185 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 IL10P22301 178 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 PSMA4P25789 261 aaKnown RBP9.73□□□□□ -0.85
HOXA1-201ENST00000343060 MAP4P27816 1152 aaKnown RBP9.73□□□□□ -0.85
HOXA1-201ENST00000343060 NMBRP28336 390 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 CD68P34810 354 aaPredicted RBP9.73□□□□□ -0.85
HOXA1-201ENST00000343060 POLR2IP36954 125 aaKnown RBP9.73□□□□□ -0.85
HOXA1-201ENST00000343060 KPNA2P52292 529 aaKnown RBP9.73□□□□□ -0.85
HOXA1-201ENST00000343060 RBP5P82980 135 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 TNFAIP2Q03169 654 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 NME3Q13232 169 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 PPP1R3AQ16821 1122 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 UGP2Q16851 508 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 FAM187BQ17R55 369 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 CYHR1Q6ZMK1 362 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 RETREG3Q86VR2 466 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 CDR2LQ86X02 465 aaPredicted RBP9.73□□□□□ -0.85
HOXA1-201ENST00000343060 MFSD6LQ8IWD5 586 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 LRRC71Q8N4P6 559 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 MINDY1Q8N5J2 469 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 LEMD2Q8NC56 503 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 TRPV3Q8NET8 790 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 CYGBQ8WWM9 190 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 STARD8Q92502 1023 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 NXNL1Q96CM4 212 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 CGREF1Q99674 301 aa9.73□□□□□ -0.85
HOXA1-201ENST00000343060 NFKBIZQ9BYH8 718 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms