RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 CTBP1Q13363 440 aa15.36■□□□□ 0.05
SNX18-202ENST00000343017 SAMD4BQ5PRF9 694 aaKnown RBP15.36■□□□□ 0.05
SNX18-202ENST00000343017 NBPF12Q5TAG4 269 aaPredicted RBP15.36■□□□□ 0.05
SNX18-202ENST00000343017 HDAC10Q969S8 669 aa15.36■□□□□ 0.05
SNX18-202ENST00000343017 ITPKCQ96DU7 683 aa15.36■□□□□ 0.05
SNX18-202ENST00000343017 TSNARE1Q96NA8 513 aa15.36■□□□□ 0.05
SNX18-202ENST00000343017 NAT9Q9BTE0 207 aa15.36■□□□□ 0.05
SNX18-202ENST00000343017 LTB4R2Q9NPC1 389 aa15.36■□□□□ 0.05
SNX18-202ENST00000343017 CCM2LQ9NUG4 571 aaPredicted RBP15.36■□□□□ 0.05
SNX18-202ENST00000343017 ATAD3AQ9NVI7 634 aa15.36■□□□□ 0.05
SNX18-202ENST00000343017 KLHL8Q9P2G9 620 aaPredicted RBP15.36■□□□□ 0.05
SNX18-202ENST00000343017 TRIM64A6NGJ6 449 aa15.36■□□□□ 0.05
SNX18-202ENST00000343017 AXIN1O15169 862 aa15.36■□□□□ 0.05
SNX18-202ENST00000343017 SYNCRIPO60506 623 aaKnown RBP15.36■□□□□ 0.05
SNX18-202ENST00000343017 PGK1P00558 417 aa15.36■□□□□ 0.05
SNX18-202ENST00000343017 PITX1P78337 314 aaPredicted RBP15.36■□□□□ 0.05
SNX18-202ENST00000343017 LAMTOR4Q0VGL1 99 aa15.36■□□□□ 0.05
SNX18-202ENST00000343017 SPCS2Q15005 226 aa15.36■□□□□ 0.05
SNX18-202ENST00000343017 CYBRD1Q53TN4 286 aa15.36■□□□□ 0.05
SNX18-202ENST00000343017 CLEC6AQ6EIG7 209 aa15.36■□□□□ 0.05
SNX18-202ENST00000343017 TBPL2Q6SJ96 375 aa15.36■□□□□ 0.05
SNX18-202ENST00000343017 DHRSXQ8N5I4 330 aa15.36■□□□□ 0.05
SNX18-202ENST00000343017 ANKRD52Q8NB46 1076 aa15.36■□□□□ 0.05
SNX18-202ENST00000343017 ABHD11Q8NFV4 315 aa15.36■□□□□ 0.05
SNX18-202ENST00000343017 LHPPQ9H008 270 aa15.36■□□□□ 0.05
SNX18-202ENST00000343017 POMKQ9H5K3 350 aa15.36■□□□□ 0.05
SNX18-202ENST00000343017 BFARQ9NZS9 450 aa15.36■□□□□ 0.05
SNX18-202ENST00000343017 MGAMO43451 1857 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 TARM1B6A8C7 271 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 LCP1P13796 627 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 NCK1P16333 377 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 YBX3P16989 372 aaKnown RBP eCLIP15.35■□□□□ 0.05
SNX18-202ENST00000343017 POU5F1BQ06416 359 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 GRM1Q13255 1194 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 SURF1Q15526 300 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 TMEM135Q86UB9 458 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 DENND6AQ8IWF6 608 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 DDIASQ8IXT1 998 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 C7orf31Q8N865 590 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 NLGN2Q8NFZ4 835 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 NSUN6Q8TEA1 469 aaKnown RBP15.35■□□□□ 0.05
SNX18-202ENST00000343017 HPDLQ96IR7 371 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 MAELQ96JY0 434 aaKnown RBP15.35■□□□□ 0.05
SNX18-202ENST00000343017 PCYT2Q99447 389 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 CCDC68Q9H2F9 335 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 RPAP3Q9H6T3 665 aaPredicted RBP15.35■□□□□ 0.05
SNX18-202ENST00000343017 AGPAT4Q9NRZ5 378 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 SLCO1B7G3V0H7 640 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 B4GALT4O60513 344 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 TCEA1P23193 301 aaKnown RBP15.35■□□□□ 0.05
SNX18-202ENST00000343017 NKX2-5P52952 324 aaPredicted RBP15.35■□□□□ 0.05
SNX18-202ENST00000343017 MPP1Q00013 466 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 OXA1LQ15070 435 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 OTUD3Q5T2D3 398 aaPredicted RBP15.35■□□□□ 0.05
SNX18-202ENST00000343017 LCLAT1Q6UWP7 414 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 MFSD6LQ8IWD5 586 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 OR13F1Q8NGS4 319 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 USP33Q8TEY7 942 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 ZC3H15Q8WU90 426 aaKnown RBP15.35■□□□□ 0.05
SNX18-202ENST00000343017 TRAPPC12Q8WVT3 735 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 TOP1MTQ969P6 601 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 RPF1Q9H9Y2 349 aaKnown RBP15.35■□□□□ 0.05
SNX18-202ENST00000343017 RNF19AQ9NV58 838 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 ARMC1Q9NVT9 282 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 SLC30A1Q9Y6M5 507 aa15.35■□□□□ 0.05
SNX18-202ENST00000343017 TIMM44O43615 452 aa15.34■□□□□ 0.05
SNX18-202ENST00000343017 XYLBO75191 536 aa15.34■□□□□ 0.05
SNX18-202ENST00000343017 AHSGP02765 367 aa15.34■□□□□ 0.05
SNX18-202ENST00000343017 ASNSP08243 561 aa15.34■□□□□ 0.05
SNX18-202ENST00000343017 FASP25445 335 aa15.34■□□□□ 0.05
SNX18-202ENST00000343017 GNL1P36915 607 aaPredicted RBP15.34■□□□□ 0.05
SNX18-202ENST00000343017 HPCAL1P37235 193 aa15.34■□□□□ 0.05
SNX18-202ENST00000343017 ANO4Q32M45 955 aa15.34■□□□□ 0.05
SNX18-202ENST00000343017 DEPDC1Q5TB30 811 aa15.34■□□□□ 0.05
SNX18-202ENST00000343017 ATF7IP2Q5U623 682 aa15.34■□□□□ 0.05
SNX18-202ENST00000343017 FUNDC1Q8IVP5 155 aa15.34■□□□□ 0.05
SNX18-202ENST00000343017 AGBL3Q8NEM8 1001 aa15.34■□□□□ 0.05
SNX18-202ENST00000343017 SEPT8Q92599 483 aa15.34■□□□□ 0.05
SNX18-202ENST00000343017 MUS81Q96NY9 551 aa15.34■□□□□ 0.05
SNX18-202ENST00000343017 C1orf50Q9BV19 199 aa15.34■□□□□ 0.05
SNX18-202ENST00000343017 FTHL17Q9BXU8 183 aa15.34■□□□□ 0.05
SNX18-202ENST00000343017 TPK1Q9H3S4 243 aa15.34■□□□□ 0.05
SNX18-202ENST00000343017 PIF1Q9H611 641 aa15.34■□□□□ 0.05
SNX18-202ENST00000343017 MINDY3Q9H8M7 445 aa15.34■□□□□ 0.05
SNX18-202ENST00000343017 WARS2Q9UGM6 360 aaKnown RBP15.34■□□□□ 0.05
SNX18-202ENST00000343017 HACL1Q9UJ83 578 aa15.34■□□□□ 0.05
SNX18-202ENST00000343017 PEX10O60683 326 aa15.34■□□□□ 0.05
SNX18-202ENST00000343017 HSPA8P11142 646 aaKnown RBP15.34■□□□□ 0.05
SNX18-202ENST00000343017 AQP6Q13520 282 aa15.34■□□□□ 0.05
SNX18-202ENST00000343017 VPS26BQ4G0F5 336 aa15.34■□□□□ 0.05
SNX18-202ENST00000343017 THOC7Q6I9Y2 204 aaKnown RBP15.34■□□□□ 0.05
SNX18-202ENST00000343017 ZC3HC1Q86WB0 502 aaKnown RBP15.34■□□□□ 0.05
SNX18-202ENST00000343017 ZNF354CQ86Y25 554 aa15.34■□□□□ 0.05
SNX18-202ENST00000343017 DUS3LQ96G46 650 aaKnown RBP15.34■□□□□ 0.05
SNX18-202ENST00000343017 EIF2AQ9BY44 585 aaKnown RBP15.34■□□□□ 0.05
SNX18-202ENST00000343017 KLQ9UEF7 1012 aa15.34■□□□□ 0.05
SNX18-202ENST00000343017 PTGDR2Q9Y5Y4 395 aa15.34■□□□□ 0.05
SNX18-202ENST00000343017 TRIM64BA6NI03 449 aa15.34■□□□□ 0.05
SNX18-202ENST00000343017 TRPC5OSA6NMA1 111 aa15.34■□□□□ 0.05
SNX18-202ENST00000343017 SPATA31C2B4DYI2 1134 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms