RNA–Protein interactions for RNA: ENST00000342988.7

SMAD4-201, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,769 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-201ENST00000342988 ADGRF2Q8IZF7 708 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 UBA3Q8TBC4 463 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 TMEM143Q96AN5 459 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 EXOC2Q96KP1 924 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 ZFYVE28Q9HCC9 887 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 TAS2R7Q9NYW3 318 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 SLC27A6Q9Y2P4 619 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 MAU2Q9Y6X3 613 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 TRDMT1O14717 391 aaKnown RBP17.73■□□□□ 0.43
SMAD4-201ENST00000342988 IFNA2P01563 188 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 SAGP10523 405 aaPredicted RBP17.73■□□□□ 0.43
SMAD4-201ENST00000342988 BGNP21810 368 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 OR1E1P30953 314 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 GRIA3P42263 894 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 ZDHHC17Q8IUH5 632 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 TRPS1Q9UHF7 1281 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 BTN3A1O00481 513 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 SEC24CP53992 1094 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 FRMD7Q6ZUT3 714 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 TMCO6Q96DC7 493 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 PTPRKQ15262 1439 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 IPO13O94829 963 aaKnown RBP17.73■□□□□ 0.43
SMAD4-201ENST00000342988 UBOX5O94941 541 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 KLHL35Q6PF15 583 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 C11orf65Q8NCR3 313 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 CDRT15Q96T59 188 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 RC3H2Q9HBD1 1191 aaKnown RBP17.73■□□□□ 0.43
SMAD4-201ENST00000342988 PCM1Q15154 2024 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 C17orf102A2RUQ5 167 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 B3GAT3O94766 335 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 ITGB3P05106 788 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 LMBRD2Q68DH5 695 aaPredicted RBP17.73■□□□□ 0.43
SMAD4-201ENST00000342988 TRAPPC5Q8IUR0 188 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 SPERTQ8NA61 448 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 TMEM47Q9BQJ4 181 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 SEMA6AQ9H2E6 1030 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 NOL11Q9H8H0 719 aaKnown RBP17.73■□□□□ 0.43
SMAD4-201ENST00000342988 PRR12Q9ULL5 1215 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 CRY1Q16526 586 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 FNBP1LQ5T0N5 605 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 FAXCQ5TGI0 409 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 SELENOMQ8WWX9 145 aa17.73■□□□□ 0.43
SMAD4-201ENST00000342988 TFPIP10646 304 aa17.72■□□□□ 0.43
SMAD4-201ENST00000342988 ZNF697Q5TEC3 545 aa17.72■□□□□ 0.43
SMAD4-201ENST00000342988 RD3Q7Z3Z2 195 aa17.72■□□□□ 0.43
SMAD4-201ENST00000342988 STK32AQ8WU08 396 aa17.72■□□□□ 0.43
SMAD4-201ENST00000342988 IFT80Q9P2H3 777 aaPredicted RBP17.72■□□□□ 0.43
SMAD4-201ENST00000342988 LEF1Q9UJU2 399 aaPredicted RBP17.72■□□□□ 0.43
SMAD4-201ENST00000342988 MTF2Q9Y483 593 aaPredicted RBP17.72■□□□□ 0.43
SMAD4-201ENST00000342988 ANXA2P2A6NMY6 339 aa17.72■□□□□ 0.43
SMAD4-201ENST00000342988 RAMP2O60895 175 aa17.72■□□□□ 0.43
SMAD4-201ENST00000342988 ANXA2P07355 339 aaKnown RBP17.72■□□□□ 0.43
SMAD4-201ENST00000342988 PUS10Q3MIT2 529 aaKnown RBP17.72■□□□□ 0.43
SMAD4-201ENST00000342988 TMEM161BQ8NDZ6 487 aa17.72■□□□□ 0.43
SMAD4-201ENST00000342988 ATXN2LQ8WWM7 1075 aaKnown RBP17.72■□□□□ 0.43
SMAD4-201ENST00000342988 ABCD2Q9UBJ2 740 aa17.72■□□□□ 0.43
SMAD4-201ENST00000342988 WASHC1A8K0Z3 465 aa17.72■□□□□ 0.43
SMAD4-201ENST00000342988 WASH3PC4AMC7 463 aa17.72■□□□□ 0.43
SMAD4-201ENST00000342988 WASH2PQ6VEQ5 465 aa17.72■□□□□ 0.43
SMAD4-201ENST00000342988 MPP5Q8N3R9 675 aa17.72■□□□□ 0.43
SMAD4-201ENST00000342988 ERBB3P21860 1342 aa17.72■□□□□ 0.43
SMAD4-201ENST00000342988 SUV39H1O43463 412 aa17.72■□□□□ 0.43
SMAD4-201ENST00000342988 N4BP2L1Q5TBK1 243 aaPredicted RBP17.72■□□□□ 0.43
SMAD4-201ENST00000342988 ILDR2Q71H61 639 aa17.72■□□□□ 0.43
SMAD4-201ENST00000342988 CTSHP09668 335 aa17.72■□□□□ 0.43
SMAD4-201ENST00000342988 FNDC3BQ53EP0 1204 aaKnown RBP17.72■□□□□ 0.43
SMAD4-201ENST00000342988 METTL3Q86U44 580 aaKnown RBP17.72■□□□□ 0.43
SMAD4-201ENST00000342988 OR2L2Q8NH16 312 aa17.72■□□□□ 0.43
SMAD4-201ENST00000342988 FANCFQ9NPI8 374 aa17.72■□□□□ 0.43
SMAD4-201ENST00000342988 IFNA21P01568 189 aa17.72■□□□□ 0.43
SMAD4-201ENST00000342988 CD2P06729 351 aa17.72■□□□□ 0.43
SMAD4-201ENST00000342988 WEE1P30291 646 aa17.72■□□□□ 0.43
SMAD4-201ENST00000342988 SSX6Q7RTT6 188 aa17.72■□□□□ 0.43
SMAD4-201ENST00000342988 UBR7Q8N806 425 aa17.72■□□□□ 0.43
SMAD4-201ENST00000342988 ZNF668Q96K58 619 aaPredicted RBP17.72■□□□□ 0.43
SMAD4-201ENST00000342988 PPP3R2Q96LZ3 170 aa17.72■□□□□ 0.43
SMAD4-201ENST00000342988 IL22Q9GZX6 179 aa17.72■□□□□ 0.43
SMAD4-201ENST00000342988 PRDM16Q9HAZ2 1276 aa17.72■□□□□ 0.43
SMAD4-201ENST00000342988 RAB26Q9ULW5 256 aa17.72■□□□□ 0.43
SMAD4-201ENST00000342988 NFE2Q16621 373 aaPredicted RBP17.71■□□□□ 0.43
SMAD4-201ENST00000342988 GCNT7Q6ZNI0 430 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 SLCO6A1Q86UG4 719 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 PRCCQ92733 491 aaPredicted RBP17.71■□□□□ 0.43
SMAD4-201ENST00000342988 LY9Q9HBG7 655 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 PAK6Q9NQU5 681 aaPredicted RBP17.71■□□□□ 0.43
SMAD4-201ENST00000342988 PRMT5O14744 637 aaPredicted RBP17.71■□□□□ 0.43
SMAD4-201ENST00000342988 TBX3O15119 743 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 CLPXO76031 633 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 MRPS22P82650 360 aaKnown RBP17.71■□□□□ 0.43
SMAD4-201ENST00000342988 TIGD4Q8IY51 512 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 CIDECQ96AQ7 238 aaPredicted RBP17.71■□□□□ 0.43
SMAD4-201ENST00000342988 MIPEPQ99797 713 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 PCDHGB2Q9Y5G2 931 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 PCDHGB1Q9Y5G3 927 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 NPTXRO95502 500 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 SNRPB2P08579 225 aaKnown RBP17.71■□□□□ 0.43
SMAD4-201ENST00000342988 IDO1P14902 403 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 PRKAG1P54619 331 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 CDK10Q15131 360 aa17.71■□□□□ 0.43
SMAD4-201ENST00000342988 ZNF433Q8N7K0 673 aaPredicted RBP17.71■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms