RNA–Protein interactions for RNA: ENST00000341421.7

TRAK1-202, Transcript of trafficking kinesin protein 1, humanhuman

TSL 1 (best) BASIC

Gene TRAK1, Length 4,620 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAK1-202ENST00000341421 MUC3BQ9H195 1237 aa11.82□□□□□ -0.52
TRAK1-202ENST00000341421 ATXN3LQ9H3M9 355 aa11.82□□□□□ -0.52
TRAK1-202ENST00000341421 CAB39LQ9H9S4 337 aa11.82□□□□□ -0.52
TRAK1-202ENST00000341421 GOLGA2P5Q9HBQ8 144 aa11.82□□□□□ -0.52
TRAK1-202ENST00000341421 FAIMQ9NVQ4 179 aa11.82□□□□□ -0.52
TRAK1-202ENST00000341421 TRNAU1APQ9NX07 287 aaKnown RBP11.82□□□□□ -0.52
TRAK1-202ENST00000341421 GDAP2Q9NXN4 497 aa11.82□□□□□ -0.52
TRAK1-202ENST00000341421 CNTN3Q9P232 1028 aa11.82□□□□□ -0.52
TRAK1-202ENST00000341421 CYTH4Q9UIA0 394 aa11.82□□□□□ -0.52
TRAK1-202ENST00000341421 FBXW11Q9UKB1 542 aa11.82□□□□□ -0.52
TRAK1-202ENST00000341421 NDUFAF1Q9Y375 327 aa11.82□□□□□ -0.52
TRAK1-202ENST00000341421 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP11.82□□□□□ -0.52
TRAK1-202ENST00000341421 SNRPB2P08579 225 aaKnown RBP11.82□□□□□ -0.52
TRAK1-202ENST00000341421 FASP25445 335 aa11.82□□□□□ -0.52
TRAK1-202ENST00000341421 OXCT1P55809 520 aa11.82□□□□□ -0.52
TRAK1-202ENST00000341421 PSME3P61289 254 aa11.82□□□□□ -0.52
TRAK1-202ENST00000341421 ZNF177Q13360 481 aaPredicted RBP11.82□□□□□ -0.52
TRAK1-202ENST00000341421 HNRNPDQ14103 355 aaKnown RBP11.82□□□□□ -0.52
TRAK1-202ENST00000341421 TFAP2DQ7Z6R9 452 aa11.82□□□□□ -0.52
TRAK1-202ENST00000341421 MPP5Q8N3R9 675 aa11.82□□□□□ -0.52
TRAK1-202ENST00000341421 MARVELD2Q8N4S9 558 aa11.82□□□□□ -0.52
TRAK1-202ENST00000341421 PCSK9Q8NBP7 692 aaKnown RBP11.82□□□□□ -0.52
TRAK1-202ENST00000341421 KCTD13Q8WZ19 329 aa11.82□□□□□ -0.52
TRAK1-202ENST00000341421 POLR1EQ9GZS1 481 aaKnown RBP11.82□□□□□ -0.52
TRAK1-202ENST00000341421 CLK4Q9HAZ1 481 aaKnown RBP11.82□□□□□ -0.52
TRAK1-202ENST00000341421 CACYBPQ9HB71 228 aaKnown RBP11.82□□□□□ -0.52
TRAK1-202ENST00000341421 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.82□□□□□ -0.52
TRAK1-202ENST00000341421 PACSIN3Q9UKS6 424 aa11.82□□□□□ -0.52
TRAK1-202ENST00000341421 CCNT2O60583 730 aaKnown RBP11.81□□□□□ -0.52
TRAK1-202ENST00000341421 CNOT3O75175 753 aaKnown RBP11.81□□□□□ -0.52
TRAK1-202ENST00000341421 NR1D2Q14995 579 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 POLD3Q15054 466 aaPredicted RBP11.81□□□□□ -0.52
TRAK1-202ENST00000341421 ANKRD23Q86SG2 305 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 FBXO39Q8N4B4 442 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 RNF148Q8N7C7 305 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 CNTD1Q8N815 330 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 ZNF555Q8NEP9 628 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 ZFP28Q8NHY6 868 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 ACTRT2Q8TDY3 377 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 CLEC4CQ8WTT0 213 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 KCNN1Q92952 543 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 LOXHD1Q8IVV2 1947 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 ALBP02768 609 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 CDK4P11802 303 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 LMO2P25791 158 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 CLCN2P51788 898 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 ATXN1P54253 815 aaKnown RBP11.81□□□□□ -0.52
TRAK1-202ENST00000341421 FCGRTP55899 365 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 ELAVL2Q12926 359 aaKnown RBP11.81□□□□□ -0.52
TRAK1-202ENST00000341421 SPIDRQ14159 915 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 CLEC4FQ8N1N0 589 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 SCAIQ8N9R8 606 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 GATA5Q9BWX5 397 aaPredicted RBP11.81□□□□□ -0.52
TRAK1-202ENST00000341421 WNK3Q9BYP7 1800 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 GPR63Q9BZJ6 419 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 UNKQ9C0B0 810 aaKnown RBP11.81□□□□□ -0.52
TRAK1-202ENST00000341421 SPAG4Q9NPE6 437 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 CHRAC1Q9NRG0 131 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 SPATA7Q9P0W8 599 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 SLC8A2Q9UPR5 921 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 SATB2Q9UPW6 733 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 KCNH4Q9UQ05 1017 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 SH3PXD2BA1X283 911 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 DYTNA2CJ06 578 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 RFPL1O75677 317 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 SERPINB1P30740 379 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 FKBP1BP68106 108 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 TWF1Q12792 350 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 ITGADQ13349 1161 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 PAFAH1B3Q15102 231 aaKnown RBP11.81□□□□□ -0.52
TRAK1-202ENST00000341421 PSMD5Q16401 504 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 CTC1Q2NKJ3 1217 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 TBCELQ5QJ74 424 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 MFSD3Q96ES6 412 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 TEKT5Q96M29 485 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 ADGRE3Q9BY15 652 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 FADS3Q9Y5Q0 445 aa11.81□□□□□ -0.52
TRAK1-202ENST00000341421 GPC6Q9Y625 555 aaPredicted RBP11.81□□□□□ -0.52
TRAK1-202ENST00000341421 SMPD1P17405 629 aa11.8□□□□□ -0.52
TRAK1-202ENST00000341421 MPSTP25325 297 aa11.8□□□□□ -0.52
TRAK1-202ENST00000341421 YWHAQP27348 245 aa11.8□□□□□ -0.52
TRAK1-202ENST00000341421 RECQLP46063 649 aaPredicted RBP11.8□□□□□ -0.52
TRAK1-202ENST00000341421 CD97P48960 835 aa11.8□□□□□ -0.52
TRAK1-202ENST00000341421 BEX3Q00994 111 aa11.8□□□□□ -0.52
TRAK1-202ENST00000341421 CTBP1Q13363 440 aa11.8□□□□□ -0.52
TRAK1-202ENST00000341421 MYLK3Q32MK0 819 aa11.8□□□□□ -0.52
TRAK1-202ENST00000341421 RNF180Q86T96 592 aa11.8□□□□□ -0.52
TRAK1-202ENST00000341421 PGAM4Q8N0Y7 254 aa11.8□□□□□ -0.52
TRAK1-202ENST00000341421 GLT1D1Q96MS3 346 aa11.8□□□□□ -0.52
TRAK1-202ENST00000341421 ZYG11BQ9C0D3 744 aa11.8□□□□□ -0.52
TRAK1-202ENST00000341421 MID1IP1Q9NPA3 183 aa11.8□□□□□ -0.52
TRAK1-202ENST00000341421 ST3GAL5Q9UNP4 418 aa11.8□□□□□ -0.52
TRAK1-202ENST00000341421 LTBP4Q8N2S1 1624 aa11.8□□□□□ -0.52
TRAK1-202ENST00000341421 TPST1O60507 370 aa11.8□□□□□ -0.52
TRAK1-202ENST00000341421 EIF2S1P05198 315 aaKnown RBP11.8□□□□□ -0.52
TRAK1-202ENST00000341421 TFEBP19484 476 aa11.8□□□□□ -0.52
TRAK1-202ENST00000341421 CDK9P50750 372 aaKnown RBP11.8□□□□□ -0.52
TRAK1-202ENST00000341421 ADGRE1Q14246 886 aa11.8□□□□□ -0.52
TRAK1-202ENST00000341421 GRM3Q14832 879 aa11.8□□□□□ -0.52
TRAK1-202ENST00000341421 NETO2Q8NC67 525 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms