RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 CEP70Q8NHQ1 597 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 P2RY11Q96G91 374 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 ATP6V1G3Q96LB4 118 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 PCDHB18PQ96TA0 734 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 PAFAH2Q99487 392 aa12.91□□□□□ -0.34
LIN54-201ENST00000340417 NDST3O95803 873 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 CYP1A1P04798 512 aaPredicted RBP12.9□□□□□ -0.34
LIN54-201ENST00000340417 BMP6P22004 513 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 ALAS2P22557 587 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 ALDH18A1P54886 795 aaKnown RBP12.9□□□□□ -0.34
LIN54-201ENST00000340417 DSC2Q02487 901 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 SLC29A2Q14542 456 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 MILR1Q7Z6M3 343 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 MRPL10Q7Z7H8 261 aaKnown RBP12.9□□□□□ -0.34
LIN54-201ENST00000340417 FUKQ8N0W3 1084 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 QRFPRQ96P65 431 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 CASD1Q96PB1 797 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 HAPLN3Q96S86 360 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 KCNF1Q9H3M0 494 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 SPHK2Q9NRA0 654 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 ARIH1Q9Y4X5 557 aaPredicted RBP12.9□□□□□ -0.34
LIN54-201ENST00000340417 HCRTO43612 131 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 DSG1Q02413 1049 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 CREB5Q02930 508 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 PHF19Q5T6S3 580 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 LVRNQ6Q4G3 990 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 LCA5Q86VQ0 697 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 NKAPQ8N5F7 415 aaKnown RBP12.9□□□□□ -0.34
LIN54-201ENST00000340417 NUS1Q96E22 293 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 ZMAT2Q96NC0 199 aaKnown RBP12.9□□□□□ -0.34
LIN54-201ENST00000340417 PAAF1Q9BRP4 392 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 PHTF1Q9UMS5 762 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 CHUKO15111 745 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 CPSF4O95639 269 aaKnown RBP12.9□□□□□ -0.34
LIN54-201ENST00000340417 CCNCP24863 283 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 TAS2R40P59535 323 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 NTHL1P78549 312 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 BMPR2Q13873 1038 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 TAF5Q15542 800 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 LPAL2Q16609 132 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 FAM45BPQ6NSW5 357 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 FAM45AQ8TCE6 357 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 ILKAPQ9H0C8 392 aaPredicted RBP12.9□□□□□ -0.34
LIN54-201ENST00000340417 WDR26Q9H7D7 661 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 RMND5AQ9H871 391 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 TRPC4Q9UBN4 977 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 ENTPD4Q9Y227 616 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 SNX8Q9Y5X2 465 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 hCG_1818297A0A087WSY0 165 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 MFSD11O43934 449 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 HLA-EP13747 358 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 CENPAP49450 140 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 IRF8Q02556 426 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 SPIDRQ14159 915 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 ZFYVE19Q96K21 471 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 PPP1R10Q96QC0 940 aaKnown RBP12.9□□□□□ -0.34
LIN54-201ENST00000340417 ARHGAP9Q9BRR9 750 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 LMAN1LQ9HAT1 526 aa12.9□□□□□ -0.34
LIN54-201ENST00000340417 PRMT3O60678 531 aa12.9□□□□□ -0.35
LIN54-201ENST00000340417 AVILO75366 819 aa12.9□□□□□ -0.35
LIN54-201ENST00000340417 CRADDP78560 199 aa12.9□□□□□ -0.35
LIN54-201ENST00000340417 NAA25Q14CX7 972 aa12.9□□□□□ -0.35
LIN54-201ENST00000340417 SLC39A4Q6P5W5 647 aa12.9□□□□□ -0.35
LIN54-201ENST00000340417 RHBDF2Q6PJF5 856 aa12.9□□□□□ -0.35
LIN54-201ENST00000340417 CYP2U1Q7Z449 544 aa12.9□□□□□ -0.35
LIN54-201ENST00000340417 DSELQ8IZU8 1212 aa12.9□□□□□ -0.35
LIN54-201ENST00000340417 PIP4K2CQ8TBX8 421 aa12.9□□□□□ -0.35
LIN54-201ENST00000340417 LMX1AQ8TE12 382 aa12.9□□□□□ -0.35
LIN54-201ENST00000340417 OSBPL1AQ9BXW6 950 aa12.9□□□□□ -0.35
LIN54-201ENST00000340417 SH3BP4Q9P0V3 963 aa12.9□□□□□ -0.35
LIN54-201ENST00000340417 HS6ST1O60243 411 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 FKBP9O95302 570 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 NUDT14O95848 222 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 CUL3Q13618 768 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 Q6ZVU0 165 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 BBS12Q6ZW61 710 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 FKBP9P1Q75LS8 142 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 LPCAT2Q7L5N7 544 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 ASZ1Q8WWH4 475 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 ATOH1Q92858 354 aaPredicted RBP12.89□□□□□ -0.35
LIN54-201ENST00000340417 CARS2Q9HA77 564 aaKnown RBP12.89□□□□□ -0.35
LIN54-201ENST00000340417 CHST7Q9NS84 486 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 KIAA0355O15063 1070 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 CHADO15335 359 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 COCHO43405 550 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 PRLRP16471 622 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 GRIA2P42262 883 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 CCINQ13939 588 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 PYROXD2Q8N2H3 581 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 MRPL43Q8N983 215 aaKnown RBP12.89□□□□□ -0.35
LIN54-201ENST00000340417 MAFAQ8NHW3 353 aaPredicted RBP12.89□□□□□ -0.35
LIN54-201ENST00000340417 HDAC10Q969S8 669 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 NCANO14594 1321 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 OR10H2O60403 315 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 ALDH4A1P30038 563 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 NR6A1Q15406 480 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 MUM1Q2TAK8 710 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 TEX44Q53QW1 395 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 EFCAB3Q8N7B9 438 aa12.89□□□□□ -0.35
LIN54-201ENST00000340417 BAP1Q92560 729 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms