RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 PRDX5P30044 214 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 CBWD6Q4V339 395 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 SETMARQ53H47 684 aaPredicted RBP12.91□□□□□ -0.34
USP47-202ENST00000339865 FAM91A1Q658Y4 838 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 DOK6Q6PKX4 331 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 MAGEC3Q8TD91 643 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 ACTRT1Q8TDG2 376 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 TMEM169Q96HH4 297 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 COA1Q9GZY4 146 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 PLEKHA1Q9HB21 404 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 SLC28A2O43868 658 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 GIMD1P0DJR0 217 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 FDPSP14324 419 aaKnown RBP12.91□□□□□ -0.34
USP47-202ENST00000339865 ZNF7P17097 686 aaPredicted RBP12.91□□□□□ -0.34
USP47-202ENST00000339865 RHEBQ15382 184 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 VMACQ2NL98 169 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 TMC7Q7Z402 723 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 TRAPPC5Q8IUR0 188 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 SEPT12Q8IYM1 358 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 AADATQ8N5Z0 425 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 C12orf50Q8NA57 414 aaPredicted RBP12.91□□□□□ -0.34
USP47-202ENST00000339865 TOP1MTQ969P6 601 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 OSGEPQ9NPF4 335 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 ZNF226Q9NYT6 803 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 GNEQ9Y223 722 aaKnown RBP12.91□□□□□ -0.34
USP47-202ENST00000339865 CKBP12277 381 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 AKT2P31751 481 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 ARL5AQ9Y689 179 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 ORC5O43913 435 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 OR1E1P30953 314 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 PGDP52209 483 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 EMC2Q15006 297 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 OGFOD2Q6N063 350 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 COMTD1Q86VU5 262 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 HACL1Q9UJ83 578 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 MRPL42Q9Y6G3 142 aaKnown RBP12.91□□□□□ -0.34
USP47-202ENST00000339865 KANTRA0A1W2PQU2 76 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 HCN1O60741 890 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 VAPBO95292 243 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 PIGNO95427 931 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 IFNGP01579 166 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 CTSKP43235 329 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 DNASE1L1P49184 302 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 DLG4P78352 724 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 CD83Q01151 205 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 NAB1Q13506 487 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 SEZ6Q53EL9 994 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 KYAT3Q6YP21 454 aaKnown RBP12.91□□□□□ -0.34
USP47-202ENST00000339865 TMPRSS11AQ6ZMR5 421 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 OR2L2Q8NH16 312 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 SYN2Q92777 582 aaPredicted RBP12.91□□□□□ -0.34
USP47-202ENST00000339865 PHB2Q99623 299 aa12.91□□□□□ -0.34
USP47-202ENST00000339865 A0A0A6YYK5 440 aaPredicted RBP12.9□□□□□ -0.34
USP47-202ENST00000339865 TPP1O14773 563 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 NCAM2O15394 837 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 CSDE1O75534 798 aaKnown RBP12.9□□□□□ -0.34
USP47-202ENST00000339865 ZNF14P17017 642 aaPredicted RBP12.9□□□□□ -0.34
USP47-202ENST00000339865 TLX1P31314 330 aaPredicted RBP12.9□□□□□ -0.34
USP47-202ENST00000339865 MTHFRP42898 656 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 OVOS1Q6IE37 1185 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 DHDDSQ86SQ9 333 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 APOBEC3FQ8IUX4 373 aaKnown RBP12.9□□□□□ -0.34
USP47-202ENST00000339865 OR5J2Q8NH18 312 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 ASB2Q96Q27 587 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 KIF20BQ96Q89 1820 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 GNALP38405 381 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 KCNJ2P63252 427 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 NAE1Q13564 534 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 MARC1Q5VT66 337 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 RAB12Q6IQ22 244 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 SATL1Q86VE3 508 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 RXFP2Q8WXD0 754 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 C12orf66Q96MD2 445 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 PFDN5Q99471 154 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 TARS2Q9BW92 718 aaKnown RBP12.9□□□□□ -0.34
USP47-202ENST00000339865 LMAN2LQ9H0V9 348 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 GPATCH2LQ9NWQ4 482 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 KCNK4Q9NYG8 393 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 SCAF8Q9UPN6 1271 aaKnown RBP12.9□□□□□ -0.34
USP47-202ENST00000339865 CORO2BQ9UQ03 480 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 MTF2Q9Y483 593 aaPredicted RBP12.9□□□□□ -0.34
USP47-202ENST00000339865 FFAR3O14843 346 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 GPR42O15529 346 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 CPNE3O75131 537 aaKnown RBP12.9□□□□□ -0.34
USP47-202ENST00000339865 LRATO95237 230 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 SCGB1D2O95969 90 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 ATP5BP06576 529 aaKnown RBP12.9□□□□□ -0.34
USP47-202ENST00000339865 AMPD2Q01433 879 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 LDHDQ86WU2 507 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 FOXRED2Q8IWF2 684 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 SLAIN2Q9P270 581 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 VPS4AQ9UN37 437 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 ZNF451Q9Y4E5 1061 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 CAPN6Q9Y6Q1 641 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 A0A087X1B8 175 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 H7C2Y5 167 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 RLN2P04090 185 aa12.9□□□□□ -0.34
USP47-202ENST00000339865 SAGP10523 405 aaPredicted RBP12.9□□□□□ -0.34
USP47-202ENST00000339865 C15orf59Q2T9L4 293 aaPredicted RBP12.9□□□□□ -0.34
USP47-202ENST00000339865 SLC25A25Q6KCM7 469 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms