RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 DSN1Q9H410 356 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 HPS4Q9NQG7 708 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 FAM8A1Q9UBU6 413 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 MAD2L2Q9UI95 211 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 PCDHGC3Q9UN70 934 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 ANKRD6Q9Y2G4 727 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 VWA7Q9Y334 891 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 PSAT1Q9Y617 370 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 SLIT2O94813 1529 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 TRAV6A0A075B6T7 132 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 TRIM64A6NGJ6 449 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 KCNU1A8MYU2 1149 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 TGFB1I1O43294 461 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 ABCB7O75027 752 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 UGT2B11O75310 529 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 DNAJB5O75953 348 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 MTA2O94776 668 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 PDGFAP04085 211 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 AKR1D1P51857 326 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 MYL6P60660 151 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 BST2Q10589 180 aaKnown RBP9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 COX10Q12887 443 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 PRR16Q569H4 304 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 PPP4R3CPQ6ZMV5 832 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 STXBP4Q6ZWJ1 553 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 R3HCC1LQ7Z5L2 792 aaKnown RBP9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 TDRD5Q8NAT2 981 aaKnown RBP9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 DAGLBQ8NCG7 672 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 OR8K3Q8NH51 312 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 LRRN4Q8WUT4 740 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 FAR1Q8WVX9 515 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 PROX1Q92786 737 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 COA7Q96BR5 231 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 TESCQ96BS2 214 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 REXO5Q96IC2 774 aaKnown RBP9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 MUS81Q96NY9 551 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 TRIM8Q9BZR9 551 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 C6orf62Q9GZU0 229 aaPredicted RBP9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 SAV1Q9H4B6 383 aaPredicted RBP9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 FBXL12Q9NXK8 326 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 BAG5Q9UL15 447 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 EMCNQ9ULC0 261 aa9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 MAGED2Q9UNF1 606 aaPredicted RBP9.73□□□□□ -0.85
PTCHD4-201ENST00000339488 ARFGEF2Q9Y6D5 1785 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 UBE4BO95155 1302 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 SPATA31A1Q5TZJ5 1347 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 MAGEB6P1A0A0J9YX57 407 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 PRORSD1PA6NEY8 169 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 FAM25AB3EWG3 89 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 FAM25CB3EWG5 89 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 FAM25GB3EWG6 89 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 H0YJX3 145 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 RNF103O00237 685 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 MED24O75448 989 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 SERPINI2O75830 405 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 PIGNO95427 931 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 GOT2P00505 430 aaKnown RBP9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 KRT1P04264 644 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 JUNP05412 331 aaKnown RBP9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 ZNF76P36508 570 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 NR2C2P49116 596 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 NPY2RP49146 381 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 ETV1P50549 477 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 FXR2P51116 673 aaKnown RBP eCLIP9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 BTN1A1Q13410 526 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 DPY19L1Q2PZI1 675 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 TRMT10BQ6PF06 316 aaKnown RBP9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 TLK2Q86UE8 772 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 UNC5BQ8IZJ1 945 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 PGAM4Q8N0Y7 254 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 VANGL1Q8TAA9 524 aaPredicted RBP9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 GAD1Q99259 594 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 ZNF577Q9BSK1 485 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 BDH2Q9BUT1 245 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 PCIF1Q9H4Z3 704 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 TCF7L2Q9NQB0 619 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 ZNF224Q9NZL3 707 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 NUFIP1Q9UHK0 495 aaKnown RBP9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 FARP1Q9Y4F1 1045 aaPredicted RBP9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 DUOX1Q9NRD9 1551 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 TRAV20A0A0B4J274 112 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 HMX2A2RU54 273 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 PTGES3LE9PB15 166 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 NDUFA2O43678 99 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 MSH3P20585 1137 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 ATP6V1B2P21281 511 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 PPP5CP53041 499 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 RHDQ02161 417 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 NFX1Q12986 1120 aaKnown RBP9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 NAB1Q13506 487 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 PCLAFQ15004 111 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 PTCHD3Q3KNS1 767 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 OTUD3Q5T2D3 398 aaPredicted RBP9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 CASC4Q6P4E1 433 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 BNIPLQ7Z465 357 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 NOXA1Q86UR1 476 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 SLC26A11Q86WA9 606 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 CDR2LQ86X02 465 aaPredicted RBP9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 PDIK1LQ8N165 341 aa9.72□□□□□ -0.85
PTCHD4-201ENST00000339488 SHCBP1Q8NEM2 672 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms