RNA–Protein interactions for RNA: ENST00000339350.7

DFFB-202, Transcript of DNA fragmentation factor subunit beta, humanhuman

TSL 1 (best)

Gene DFFB, Length 3,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DFFB-202ENST00000339350 ADGRF2Q8IZF7 708 aa12.72□□□□□ -0.37
DFFB-202ENST00000339350 SIX6OS1Q8N1H7 587 aa12.72□□□□□ -0.37
DFFB-202ENST00000339350 PLD5Q8N7P1 536 aa12.72□□□□□ -0.37
DFFB-202ENST00000339350 DEPDC1BQ8WUY9 529 aa12.72□□□□□ -0.37
DFFB-202ENST00000339350 ZNF778Q96MU6 729 aa12.72□□□□□ -0.37
DFFB-202ENST00000339350 IL12RB2Q99665 862 aa12.72□□□□□ -0.37
DFFB-202ENST00000339350 LPIN3Q9BQK8 851 aa12.72□□□□□ -0.37
DFFB-202ENST00000339350 NPLQ9BXD5 320 aaPredicted RBP12.72□□□□□ -0.37
DFFB-202ENST00000339350 NARFLQ9H6Q4 476 aa12.72□□□□□ -0.37
DFFB-202ENST00000339350 RMND5AQ9H871 391 aa12.72□□□□□ -0.37
DFFB-202ENST00000339350 NANOGQ9H9S0 305 aa12.72□□□□□ -0.37
DFFB-202ENST00000339350 RSAD1Q9HA92 442 aa12.72□□□□□ -0.37
DFFB-202ENST00000339350 TCF7L2Q9NQB0 619 aa12.72□□□□□ -0.37
DFFB-202ENST00000339350 KCTD5Q9NXV2 234 aa12.72□□□□□ -0.37
DFFB-202ENST00000339350 BOLA1Q9Y3E2 137 aa12.72□□□□□ -0.37
DFFB-202ENST00000339350 MFHAS1Q9Y4C4 1052 aa12.72□□□□□ -0.37
DFFB-202ENST00000339350 A0A087WXM4 84 aa12.71□□□□□ -0.37
DFFB-202ENST00000339350 CLPXO76031 633 aa12.71□□□□□ -0.37
DFFB-202ENST00000339350 MX2P20592 715 aa12.71□□□□□ -0.37
DFFB-202ENST00000339350 UBA1P22314 1058 aaKnown RBP12.71□□□□□ -0.37
DFFB-202ENST00000339350 CDH5P33151 784 aaPredicted RBP12.71□□□□□ -0.37
DFFB-202ENST00000339350 HK2P52789 917 aa12.71□□□□□ -0.37
DFFB-202ENST00000339350 PTPN11Q06124 597 aaPredicted RBP12.71□□□□□ -0.37
DFFB-202ENST00000339350 LAMTOR4Q0VGL1 99 aa12.71□□□□□ -0.37
DFFB-202ENST00000339350 MRPL28Q13084 256 aaKnown RBP12.71□□□□□ -0.37
DFFB-202ENST00000339350 LAPTM5Q13571 262 aa12.71□□□□□ -0.37
DFFB-202ENST00000339350 FASTKD1Q53R41 847 aaKnown RBP12.71□□□□□ -0.37
DFFB-202ENST00000339350 ATG16L1Q676U5 607 aa12.71□□□□□ -0.37
DFFB-202ENST00000339350 FAM183BPQ6ZVS7 135 aa12.71□□□□□ -0.37
DFFB-202ENST00000339350 CARM1Q86X55 608 aa12.71□□□□□ -0.37
DFFB-202ENST00000339350 ZNF786Q8N393 782 aa12.71□□□□□ -0.37
DFFB-202ENST00000339350 FAM47BQ8NA70 645 aa12.71□□□□□ -0.37
DFFB-202ENST00000339350 METTL2AQ96IZ6 378 aaKnown RBP12.71□□□□□ -0.37
DFFB-202ENST00000339350 PNPOQ9NVS9 261 aa12.71□□□□□ -0.37
DFFB-202ENST00000339350 ZNF358Q9NW07 568 aa12.71□□□□□ -0.37
DFFB-202ENST00000339350 COQ3Q9NZJ6 369 aa12.71□□□□□ -0.37
DFFB-202ENST00000339350 SIX4Q9UIU6 781 aa12.71□□□□□ -0.37
DFFB-202ENST00000339350 CPSF3Q9UKF6 684 aaKnown RBP12.71□□□□□ -0.37
DFFB-202ENST00000339350 ERVH48-1M5A8F1 160 aa12.71□□□□□ -0.38
DFFB-202ENST00000339350 PGK2P07205 417 aa12.71□□□□□ -0.38
DFFB-202ENST00000339350 SERPINA6P08185 405 aa12.71□□□□□ -0.38
DFFB-202ENST00000339350 ICAM2P13598 275 aa12.71□□□□□ -0.38
DFFB-202ENST00000339350 NCF2P19878 526 aaPredicted RBP12.71□□□□□ -0.38
DFFB-202ENST00000339350 ITGAXP20702 1163 aa12.71□□□□□ -0.38
DFFB-202ENST00000339350 ABCG1P45844 678 aa12.71□□□□□ -0.38
DFFB-202ENST00000339350 PPM1JQ5JR12 505 aa12.71□□□□□ -0.38
DFFB-202ENST00000339350 MAP1SQ66K74 1059 aaPredicted RBP12.71□□□□□ -0.38
DFFB-202ENST00000339350 SLC22A16Q86VW1 577 aa12.71□□□□□ -0.38
DFFB-202ENST00000339350 HM13Q8TCT9 377 aa12.71□□□□□ -0.38
DFFB-202ENST00000339350 RNF157Q96PX1 679 aa12.71□□□□□ -0.38
DFFB-202ENST00000339350 DOK1Q99704 481 aa12.71□□□□□ -0.38
DFFB-202ENST00000339350 OSBPL11Q9BXB4 747 aa12.71□□□□□ -0.38
DFFB-202ENST00000339350 SEMA6AQ9H2E6 1030 aa12.71□□□□□ -0.38
DFFB-202ENST00000339350 ASNSD1Q9NWL6 643 aa12.71□□□□□ -0.38
DFFB-202ENST00000339350 SLC45A1Q9Y2W3 748 aa12.71□□□□□ -0.38
DFFB-202ENST00000339350 GPC4O75487 556 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 AOC1P19801 751 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 CCNA2P20248 432 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 FGFR3P22607 806 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 SERPINB1P30740 379 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 GTF2A2P52657 109 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 PPP2R5DQ14738 602 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 STXBP2Q15833 593 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 CADM2Q8N3J6 435 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 KIAA1958Q8N8K9 716 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 C1orf127Q8N9H9 656 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 ZNF420Q8TAQ5 688 aaPredicted RBP12.7□□□□□ -0.38
DFFB-202ENST00000339350 HTRA1Q92743 480 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 ZNF347Q96SE7 839 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 B3GNT5Q9BYG0 378 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 ACAD9Q9H845 621 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 MINDY3Q9H8M7 445 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 CLDN25C9JDP6 229 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 NOL3O60936 208 aaKnown RBP12.7□□□□□ -0.38
DFFB-202ENST00000339350 NADKO95544 446 aaPredicted RBP12.7□□□□□ -0.38
DFFB-202ENST00000339350 BPGMP07738 259 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 GPD1P21695 349 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 RAD23AP54725 363 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 OLIG2Q13516 323 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 TBCCQ15814 346 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 TAZQ16635 292 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 RSBN1Q5VWQ0 802 aaPredicted RBP12.7□□□□□ -0.38
DFFB-202ENST00000339350 IDO2Q6ZQW0 420 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 METTL3Q86U44 580 aaKnown RBP12.7□□□□□ -0.38
DFFB-202ENST00000339350 SCUBE3Q8IX30 993 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 PQLC3Q8N755 202 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 LEMD2Q8NC56 503 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 REPS2Q8NFH8 660 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 PCDH19Q8TAB3 1148 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 PPP1R13LQ8WUF5 828 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 PDCD6IPQ8WUM4 868 aaKnown RBP12.7□□□□□ -0.38
DFFB-202ENST00000339350 KLRG1Q96E93 195 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 POLR1BQ9H9Y6 1135 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 FAM49BQ9NUQ9 324 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 THG1LQ9NWX6 298 aaKnown RBP12.7□□□□□ -0.38
DFFB-202ENST00000339350 MKI67P46013 3256 aaKnown RBP12.7□□□□□ -0.38
DFFB-202ENST00000339350 WDR27A2RRH5 827 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 TRIM64A6NGJ6 449 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 TRIM64BA6NI03 449 aa12.7□□□□□ -0.38
DFFB-202ENST00000339350 ATP6V1G2-DDX39BF2Z307 99 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms