RNA–Protein interactions for RNA: ENST00000339276.5

SFN-201, Transcript of stratifin, humanhuman

APPRIS P1 BASIC

Gene SFN, Length 1,320 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFN-201ENST00000339276 USP34Q70CQ2 3546 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 MYO15AQ9UKN7 3530 aa16.87■□□□□ 0.29
SFN-201ENST00000339276 TBC1D3DA0A087WVF3 549 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 TBC1D3IA0A087WXS9 549 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 TBC1D3EA0A087X179 549 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 TBC1D3KA0A087X1G2 549 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 TBC1D3FA6NER0 549 aaPredicted RBP16.86■□□□□ 0.29
SFN-201ENST00000339276 LRRC72A6NJI9 287 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 UPK3BL1B0FP48 263 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 TBC1D3LB9A6J9 549 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 UPK3BL2E5RIL1 263 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 STK10O94804 968 aaKnown RBP16.86■□□□□ 0.29
SFN-201ENST00000339276 RHOBTB1O94844 696 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 PGLSO95336 258 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 MT-CYBP00156 380 aaPredicted RBP16.86■□□□□ 0.29
SFN-201ENST00000339276 CPP00450 1065 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 TBC1D3HP0C7X1 549 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 XPAP23025 273 aaPredicted RBP16.86■□□□□ 0.29
SFN-201ENST00000339276 CCNG2Q16589 344 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 UGP2Q16851 508 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 ANKRD20A2Q5SQ80 823 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 ANKRD20A1Q5TYW2 823 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 ANKRD20A3Q5VUR7 823 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 TBC1D3GQ6DHY5 549 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 TBC1D3CQ6IPX1 549 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 SYT10Q6XYQ8 523 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 TBC1D3Q8IZP1 549 aaPredicted RBP16.86■□□□□ 0.29
SFN-201ENST00000339276 PRELID2Q8N945 189 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 CADM4Q8NFZ8 388 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 ACTRT1Q8TDG2 376 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 RAB7BQ96AH8 199 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 C16orf45Q96MC5 204 aaPredicted RBP16.86■□□□□ 0.29
SFN-201ENST00000339276 SPATA13Q96N96 652 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 AP1M1Q9BXS5 423 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 UBP1Q9NZI7 540 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 RSPH14Q9UHP6 348 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 RAB23Q9ULC3 237 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 ZNF148Q9UQR1 794 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 PCDHB9Q9Y5E1 797 aa16.86■□□□□ 0.29
SFN-201ENST00000339276 CFAP69A5D8W1 941 aa16.85■□□□□ 0.29
SFN-201ENST00000339276 METTL12A8MUP2 240 aa16.85■□□□□ 0.29
SFN-201ENST00000339276 MEI4A8MW99 385 aa16.85■□□□□ 0.29
SFN-201ENST00000339276 C10orf142B7Z368 130 aa16.85■□□□□ 0.29
SFN-201ENST00000339276 AREL1O15033 823 aa16.85■□□□□ 0.29
SFN-201ENST00000339276 AP1G1O43747 822 aa16.85■□□□□ 0.29
SFN-201ENST00000339276 FZD6O60353 706 aa16.85■□□□□ 0.29
SFN-201ENST00000339276 ZNF189O75820 626 aaPredicted RBP16.85■□□□□ 0.29
SFN-201ENST00000339276 FSBPO95073 299 aa16.85■□□□□ 0.29
SFN-201ENST00000339276 IGHV4-34P06331 123 aa16.85■□□□□ 0.29
SFN-201ENST00000339276 PDHA1P08559 390 aa16.85■□□□□ 0.29
SFN-201ENST00000339276 PRLRP16471 622 aa16.85■□□□□ 0.29
SFN-201ENST00000339276 SEMG2Q02383 582 aa16.85■□□□□ 0.29
SFN-201ENST00000339276 ARMC12Q5T9G4 340 aa16.85■□□□□ 0.29
SFN-201ENST00000339276 LYSMD4Q5XG99 296 aa16.85■□□□□ 0.29
SFN-201ENST00000339276 KIAA0895LQ68EN5 471 aa16.85■□□□□ 0.29
SFN-201ENST00000339276 TADA1Q96BN2 335 aa16.85■□□□□ 0.29
SFN-201ENST00000339276 BIRC7Q96CA5 298 aa16.85■□□□□ 0.29
SFN-201ENST00000339276 CAPZA3Q96KX2 299 aa16.85■□□□□ 0.29
SFN-201ENST00000339276 GORASP1Q9BQQ3 440 aa16.85■□□□□ 0.29
SFN-201ENST00000339276 PCED1AQ9H1Q7 454 aa16.85■□□□□ 0.29
SFN-201ENST00000339276 GBA3Q9H227 469 aa16.85■□□□□ 0.29
SFN-201ENST00000339276 KDM4CQ9H3R0 1056 aa16.85■□□□□ 0.29
SFN-201ENST00000339276 SEMA4AQ9H3S1 761 aa16.85■□□□□ 0.29
SFN-201ENST00000339276 PREBQ9HCU5 417 aa16.85■□□□□ 0.29
SFN-201ENST00000339276 PCDH12Q9NPG4 1184 aa16.85■□□□□ 0.29
SFN-201ENST00000339276 CHKBQ9Y259 395 aa16.85■□□□□ 0.29
SFN-201ENST00000339276 ZBTB32Q9Y2Y4 487 aaPredicted RBP16.85■□□□□ 0.29
SFN-201ENST00000339276 SAR1BQ9Y6B6 198 aa16.85■□□□□ 0.29
SFN-201ENST00000339276 ATXN2Q99700 1313 aaKnown RBP16.84■□□□□ 0.29
SFN-201ENST00000339276 C5orf60A6NFR6 353 aa16.84■□□□□ 0.29
SFN-201ENST00000339276 PROB1E7EW31 1015 aa16.84■□□□□ 0.29
SFN-201ENST00000339276 OPHN1O60890 802 aa16.84■□□□□ 0.29
SFN-201ENST00000339276 RNGTTO60942 597 aaKnown RBP16.84■□□□□ 0.29
SFN-201ENST00000339276 PCDH8O95206 1070 aa16.84■□□□□ 0.29
SFN-201ENST00000339276 PRLP01236 227 aa16.84■□□□□ 0.29
SFN-201ENST00000339276 ITGAVP06756 1048 aa16.84■□□□□ 0.29
SFN-201ENST00000339276 PSMB4P28070 264 aa16.84■□□□□ 0.29
SFN-201ENST00000339276 CASQ1P31415 396 aa16.84■□□□□ 0.29
SFN-201ENST00000339276 PCSK7Q16549 785 aa16.84■□□□□ 0.29
SFN-201ENST00000339276 SPDYCQ5MJ68 293 aa16.84■□□□□ 0.29
SFN-201ENST00000339276 ITPRIPL1Q6GPH6 555 aa16.84■□□□□ 0.29
SFN-201ENST00000339276 LAIR1Q6GTX8 287 aa16.84■□□□□ 0.29
SFN-201ENST00000339276 DRICH1Q6PGQ1 229 aaPredicted RBP16.84■□□□□ 0.29
SFN-201ENST00000339276 SNX19Q92543 992 aa16.84■□□□□ 0.29
SFN-201ENST00000339276 SPOCK2Q92563 424 aa16.84■□□□□ 0.29
SFN-201ENST00000339276 FOXJ1Q92949 421 aa16.84■□□□□ 0.29
SFN-201ENST00000339276 RTP4Q96DX8 246 aa16.84■□□□□ 0.29
SFN-201ENST00000339276 OXNAD1Q96HP4 312 aaPredicted RBP16.84■□□□□ 0.29
SFN-201ENST00000339276 FCRL5Q96RD9 977 aa16.84■□□□□ 0.29
SFN-201ENST00000339276 NAP1L3Q99457 506 aaPredicted RBP16.84■□□□□ 0.29
SFN-201ENST00000339276 PCDH9Q9HC56 1237 aa16.84■□□□□ 0.29
SFN-201ENST00000339276 DMDP11532 3685 aa16.84■□□□□ 0.29
SFN-201ENST00000339276 SDK1Q7Z5N4 2213 aa16.83■□□□□ 0.29
SFN-201ENST00000339276 A0A1W2PQ67 120 aa16.83■□□□□ 0.28
SFN-201ENST00000339276 A0A1W2PQU0 124 aa16.83■□□□□ 0.28
SFN-201ENST00000339276 NEMP1O14524 444 aa16.83■□□□□ 0.28
SFN-201ENST00000339276 RIOK3O14730 519 aaKnown RBP16.83■□□□□ 0.28
SFN-201ENST00000339276 PMPCBO75439 489 aa16.83■□□□□ 0.28
SFN-201ENST00000339276 EPN2O95208 641 aa16.83■□□□□ 0.28
SFN-201ENST00000339276 LMNAP02545 664 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 64.7 ms