RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 HOXA9P31269 272 aa11.18□□□□□ -0.62
LRP1-202ENST00000338962 SLC6A4P31645 630 aa11.18□□□□□ -0.62
LRP1-202ENST00000338962 ELF1P32519 619 aa11.18□□□□□ -0.62
LRP1-202ENST00000338962 ARCN1P48444 511 aaKnown RBP11.18□□□□□ -0.62
LRP1-202ENST00000338962 RASSF2P50749 326 aa11.18□□□□□ -0.62
LRP1-202ENST00000338962 KCNJ2P63252 427 aa11.18□□□□□ -0.62
LRP1-202ENST00000338962 TNK2Q07912 1038 aa11.18□□□□□ -0.62
LRP1-202ENST00000338962 CTBP1Q13363 440 aa11.18□□□□□ -0.62
LRP1-202ENST00000338962 RIPK1Q13546 671 aa11.18□□□□□ -0.62
LRP1-202ENST00000338962 USP10Q14694 798 aaKnown RBP11.18□□□□□ -0.62
LRP1-202ENST00000338962 GRM3Q14832 879 aa11.18□□□□□ -0.62
LRP1-202ENST00000338962 CES4AQ5XG92 561 aa11.18□□□□□ -0.62
LRP1-202ENST00000338962 ZNF470Q6ECI4 717 aa11.18□□□□□ -0.62
LRP1-202ENST00000338962 KIAA0930Q6ICG6 404 aaPredicted RBP11.18□□□□□ -0.62
LRP1-202ENST00000338962 CCDC149Q6ZUS6 474 aa11.18□□□□□ -0.62
LRP1-202ENST00000338962 C10orf107Q8IVU9 208 aa11.18□□□□□ -0.62
LRP1-202ENST00000338962 DENND6AQ8IWF6 608 aa11.18□□□□□ -0.62
LRP1-202ENST00000338962 KIF2BQ8N4N8 673 aa11.18□□□□□ -0.62
LRP1-202ENST00000338962 VN1R2Q8NFZ6 395 aa11.18□□□□□ -0.62
LRP1-202ENST00000338962 RNF217Q8TC41 542 aa11.18□□□□□ -0.62
LRP1-202ENST00000338962 MYLIPQ8WY64 445 aa11.18□□□□□ -0.62
LRP1-202ENST00000338962 PLD4Q96BZ4 506 aa11.18□□□□□ -0.62
LRP1-202ENST00000338962 MYRFLQ96LU7 910 aa11.18□□□□□ -0.62
LRP1-202ENST00000338962 ZNF395Q9H8N7 513 aaPredicted RBP11.18□□□□□ -0.62
LRP1-202ENST00000338962 ZNF358Q9NW07 568 aa11.18□□□□□ -0.62
LRP1-202ENST00000338962 SLC2A6Q9UGQ3 507 aa11.18□□□□□ -0.62
LRP1-202ENST00000338962 YIPF1Q9Y548 306 aa11.18□□□□□ -0.62
LRP1-202ENST00000338962 ZFP37Q9Y6Q3 630 aaPredicted RBP11.18□□□□□ -0.62
LRP1-202ENST00000338962 PRRG1O14668 218 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 AHSGP02765 367 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 SERPINE1P05121 402 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 MMP2P08253 660 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 KITP10721 976 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 FGF3P11487 239 aaPredicted RBP11.17□□□□□ -0.62
LRP1-202ENST00000338962 CPA3P15088 417 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 GMPRP36959 345 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 NUMBP49757 651 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 PLD1Q13393 1074 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 C5orf22Q49AR2 442 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 IL31Q6EBC2 164 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 ASRGL1Q7L266 308 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 CLEC14AQ86T13 490 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 PLD6Q8N2A8 252 aaKnown RBP11.17□□□□□ -0.62
LRP1-202ENST00000338962 BBS5Q8N3I7 341 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 GABPB2Q8TAK5 448 aaPredicted RBP11.17□□□□□ -0.62
LRP1-202ENST00000338962 PPP4R1Q8TF05 950 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 SREK1Q8WXA9 508 aaKnown RBP11.17□□□□□ -0.62
LRP1-202ENST00000338962 SEMA3CQ99985 751 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 FAM167BQ9BTA0 163 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 WWP1Q9H0M0 922 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 MAGEH1Q9H213 219 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 RETREG1Q9H6L5 497 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 ATP13A1Q9HD20 1204 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 ARHGEF3Q9NR81 526 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 FBXO6Q9NRD1 293 aaPredicted RBP11.17□□□□□ -0.62
LRP1-202ENST00000338962 HAO1Q9UJM8 370 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 TRIM33Q9UPN9 1127 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 A0A0D9SEW6 157 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 HAUS5O94927 633 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 CBX6O95503 412 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 GLP2RO95838 553 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 PRKCGP05129 697 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 POU2F2P09086 479 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 SPATA31D3P0C874 917 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 RALBP11234 206 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 CORO1AP31146 461 aaKnown RBP11.17□□□□□ -0.62
LRP1-202ENST00000338962 SLC1A2P43004 574 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 SLC1A6P48664 564 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 CDH4P55283 916 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 RPS24P62847 133 aaKnown RBP11.17□□□□□ -0.62
LRP1-202ENST00000338962 ELF3P78545 371 aaPredicted RBP11.17□□□□□ -0.62
LRP1-202ENST00000338962 MPP1Q00013 466 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 IRF9Q00978 393 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 GNA12Q03113 381 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 NEPROQ6NW34 567 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 ELMSAN1Q6PJG2 1045 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 SPATA31D4Q6ZUB0 917 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 WDR75Q8IWA0 830 aaKnown RBP11.17□□□□□ -0.62
LRP1-202ENST00000338962 PGBD5Q8N414 524 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 ACVR1CQ8NER5 493 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 ARRDC2Q8TBH0 407 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 SKA1Q96BD8 255 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 IFT43Q96FT9 208 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 TRMT2BQ96GJ1 504 aaKnown RBP11.17□□□□□ -0.62
LRP1-202ENST00000338962 ZNF599Q96NL3 588 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 RANBP9Q96S59 729 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 C20orf27Q9GZN8 174 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 LRMDAQ9H2I8 198 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 NMRAL1Q9HBL8 299 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 SAR1AQ9NR31 198 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 MAN1C1Q9NR34 630 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 ZDHHC7Q9NXF8 308 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 MCM8Q9UJA3 840 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 INSL5Q9Y5Q6 135 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 MYO7AQ13402 2215 aa11.17□□□□□ -0.62
LRP1-202ENST00000338962 TTC24A2A3L6 582 aaPredicted RBP11.16□□□□□ -0.62
LRP1-202ENST00000338962 PHGDHO43175 533 aaKnown RBP11.16□□□□□ -0.62
LRP1-202ENST00000338962 DNAJC6O75061 913 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 CLDN11O75508 207 aa11.16□□□□□ -0.62
LRP1-202ENST00000338962 STC2O76061 302 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms